KEGG   Petromyzon marinus (sea lamprey): 116946206
Entry
116946206         CDS       T09614                                 
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116946206 (SNF8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmrn04131]
    116946206 (SNF8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmrn04147]
    116946206 (SNF8)
Membrane trafficking [BR:pmrn04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    116946206 (SNF8)
Exosome [BR:pmrn04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   116946206 (SNF8)
SSDB
Motif
Pfam: EAP30 ZapD DotZ L27_2 RPA_interact_C Phage_Mu_Gam
Other DBs
NCBI-GeneID: 116946206
NCBI-ProteinID: XP_032817082
UniProt: A0AAJ7TFN6
LinkDB
Position
2:10785755..10794623
AA seq 255 aa
MHRRGVGAGAIAKKKLAEARYKERGNVMAEDQLSQMSKQLETFRTNLEEFASKHKQEIRR
NPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIVEVCLALRHRNGGLMM
LEELHNRVLKSRGKYGQELSQDDLIRAIKKLKVLGNGFCMIPMGGTYLVQSVPAELNMDH
TTVLQIAEKKGYVSVEEITSSLKWETERTNHVLAHLLREGLAWIDQQALGGAQYWFPALF
TDLYSQDISPDEASS
NT seq 768 nt   +upstreamnt  +downstreamnt
atgcatcggagaggagttggtgctggagccattgccaagaaaaagctggccgaggcaaga
tataaggaaagggggaatgtcatggccgaagatcagctctcacagatgtccaagcagctg
gagacttttaggaccaacctggaggagtttgccagcaaacataagcaggagatccgccgc
aatccacagttcagagtgcagttccaggacatgtgtgccaccattggcgttgatcctctt
gcatctgggaaggggttctggtcagagatgctcggagtgggagatttttactatgagctg
ggtgtgcagatcgtggaagtctgccttgcccttcgtcaccgaaatggagggctgatgatg
ctggaggagctacacaatcgtgtgctgaagagcaggggcaagtacggccaggagcttagt
caagatgatctaatccgagccataaaaaagctcaaggtgctgggcaatggcttctgcatg
atccccatgggtggaacctacctggtgcagtctgttcctgctgagctcaacatggatcat
accacagtgctccaaatcgctgagaaaaagggctacgtgagcgttgaggaaattacatct
tctttgaagtgggaaacggagcgtacaaaccacgtgttggctcacttgctgagggaagga
ctggcctggatcgaccagcaggcacttgggggagcgcagtactggttccctgctctcttc
accgacctgtacagccaggacatcagtcccgatgaagccagctcgtag

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