Petromyzon marinus (sea lamprey): 116946206
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Entry
116946206 CDS
T09614
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116946206 (SNF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116946206 (SNF8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116946206 (SNF8)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
116946206 (SNF8)
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116946206 (SNF8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
ZapD
DotZ
L27_2
RPA_interact_C
Phage_Mu_Gam
Motif
Other DBs
NCBI-GeneID:
116946206
NCBI-ProteinID:
XP_032817082
UniProt:
A0AAJ7TFN6
LinkDB
All DBs
Position
2:10785755..10794623
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AA seq
255 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEARYKERGNVMAEDQLSQMSKQLETFRTNLEEFASKHKQEIRR
NPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIVEVCLALRHRNGGLMM
LEELHNRVLKSRGKYGQELSQDDLIRAIKKLKVLGNGFCMIPMGGTYLVQSVPAELNMDH
TTVLQIAEKKGYVSVEEITSSLKWETERTNHVLAHLLREGLAWIDQQALGGAQYWFPALF
TDLYSQDISPDEASS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggagaggagttggtgctggagccattgccaagaaaaagctggccgaggcaaga
tataaggaaagggggaatgtcatggccgaagatcagctctcacagatgtccaagcagctg
gagacttttaggaccaacctggaggagtttgccagcaaacataagcaggagatccgccgc
aatccacagttcagagtgcagttccaggacatgtgtgccaccattggcgttgatcctctt
gcatctgggaaggggttctggtcagagatgctcggagtgggagatttttactatgagctg
ggtgtgcagatcgtggaagtctgccttgcccttcgtcaccgaaatggagggctgatgatg
ctggaggagctacacaatcgtgtgctgaagagcaggggcaagtacggccaggagcttagt
caagatgatctaatccgagccataaaaaagctcaaggtgctgggcaatggcttctgcatg
atccccatgggtggaacctacctggtgcagtctgttcctgctgagctcaacatggatcat
accacagtgctccaaatcgctgagaaaaagggctacgtgagcgttgaggaaattacatct
tctttgaagtgggaaacggagcgtacaaaccacgtgttggctcacttgctgagggaagga
ctggcctggatcgaccagcaggcacttgggggagcgcagtactggttccctgctctcttc
accgacctgtacagccaggacatcagtcccgatgaagccagctcgtag
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