Petromyzon marinus (sea lamprey): 116946226
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Entry
116946226 CDS
T09614
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116946226
03037 Cilium and associated proteins [BR:
pmrn03037
]
116946226
Transporters [BR:
pmrn02000
]
Other transporters
Pores ion channels [TC:
1
]
116946226
Cilium and associated proteins [BR:
pmrn03037
]
Other cilia and associated proteins
Stereociliary proteins
116946226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF6276
Motif
Other DBs
NCBI-GeneID:
116946226
NCBI-ProteinID:
XP_032817117
UniProt:
A0AAJ7X112
LinkDB
All DBs
Position
26:complement(7177425..7200541)
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AA seq
895 aa
AA seq
DB search
MKTTAEPAGREPSVFTFDFRTLNRETPLEREARLADTFRSRLLRLQARGSPGILSHSVRP
NALLNLQQPQQQQLLQQSLLTQQAEFGAWAPSLLPLPEIGPLEDAFLPYSILHELPSRTV
GRRQAHCLAPRFCGPLSARIFRFPQPSSALLRMATTPGISVDGTIDEEDDDPSAVDAGVV
KQLAFLAPSERLHAVRSLTLALATRRRYRLQAITETAMWRGRPDTKLEALQARTGTLVQS
LVQSAQDCVSLVTRPLAPWHTSLREVSGRFGTGVSSYFTLIRTLLAFNLLATVLFTAFLV
TPQLLVRAHGDAGGQEDEEGAGTSARGNGTRGNVSRENVARGNGTGPVAFTGLELLTGTG
AFTHSSFYYGFYSNETLSWWTSGGEGASAANATGPRGSPAPRTEDPSYNMQLAYLFTMVA
YLLTCVFVLLCWLGRSFSENYLRGGEIGFYSRKVFTGWDFALTSSRAVHVTRRNIGTFLK
EVLAEGARRNRGSPRARWSRRLLARAPTWLLSMALAAGSAAGLHFLCQSADALERRGEAL
WLEVSLLLVPAVACLVNTLLPPVFTTLTHLEGYHSPRHGVYASVGRNLLLKVSLLAVLCY
DWLQRSPVPHSECWETRLGQDLYRLVVMDFIFSLLGTFFIEFVWRLLLSSSSSSSSCRGK
SSSEPEQQGSHKPEFDIARNVLDLIYGQTLAWLGIFFAPLLPLVQLIKLIILFYVKRRSL
YLNCQPPTKPWRASQMSTIFLLLLFFPSFFSVVAVVAVTMWTREPSPGCGPFRGLPLAYD
AVRRWAASLPFGSAAIAWIYHNLVESPIFFFAATSLVLLIIYINVQILAAQRHVIELLQA
RIEHEGQDKIFVLEKLREEHKRQMEVKAARQSKRSRQKDKKNYSAQMWPCQADLS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgacggctgaaccagctgggcgcgagccttccgttttcactttcgactttcgc
accctcaacagggagaccccgctggagagggaggcccgcttggccgacacattccggtcc
cggctgctgcgcctgcaagcgcgcggctccccagggattctatcgcactcggttcgcccc
aacgccctgctcaacctgcagcagccgcaacagcagcagctcctgcagcagagcctgctg
acgcagcaggcggagttcggagcgtgggcgccctcgctgctccctctgcccgagatcggg
ccactcgaagatgcctttctgccgtacagcatcctccacgagctgcccagccgcaccgtg
gggcgcagacaggctcactgcctggccccacgcttctgtggaccactctcggcccggatc
ttccgcttcccgcagccgagcagcgccctcctgcgcatggccaccacccctggaatctct
gtcgacggaactattgacgaggaagacgacgatcctagcgcagtggacgcgggcgtggtg
aagcagctggcgttcctggcgccctcggagcgcctgcacgcggtgcgcagtctgacgctg
gcgctggcgacgcggcgccgttaccgcctgcaggccatcaccgagacggcgatgtggagg
ggccgccccgacaccaaactggaagccctgcaggcgcggacggggaccctcgtccaatcg
ctggtgcagtctgcccaagactgtgtgtcactggtgacgaggcccctcgccccatggcac
acgagcctgcgcgaggtgagcggccgcttcggcacgggggtgagctcctacttcacgctc
atccgcacgctgctcgccttcaacctcctcgccaccgtgctcttcaccgccttcctcgtc
acgccgcagctcctcgtgcgggcgcacggcgacgccggcgggcaggaggacgaggaggga
gccgggacaagtgcccgtggcaacgggacccgtggaaacgtttcccgtgagaatgtcgct
cgtgggaatgggactggcccggtcgccttcaccggcctagagctgctcacgggcacgggc
gctttcacccacagctccttctactacggattctactccaacgagacgctgagctggtgg
acgagcggcggggagggggcctcggccgccaacgcgactgggccccgggggtccccggcg
ccacggacggaggacccctcctacaacatgcagctcgcgtatctcttcacgatggtggcg
tacctgctcacgtgcgtgttcgtgctgctgtgctggctgggccggtcgttcagcgagaac
tacctgcgcggcggtgagatcggcttctactcgcgcaaggtgttcaccggctgggacttc
gcgctgacgagcagcagggccgtgcacgtgacccgccgcaacatcggcaccttcctcaag
gaggtgctcgccgagggggcgcgccggaaccggggcagcccgcgggcacgctggagccgc
cggctgctggcccgagcgcccacctggctcctctccatggcgctcgcagccggctcggcg
gccgggttgcatttcctctgccagagcgccgacgcgctggagcggcggggcgaggcgctg
tggctcgaggtgtcactgcttctcgtgccggcggtcgcctgcctggtgaacacgctgctg
ccgcccgtcttcacgaccctcacgcacctggagggctatcacagcccgcggcacggcgtc
tacgccagtgtcggacggaacctgctgctcaaggtgtctctgctggccgtgctgtgctac
gattggctccagcgctcgcccgtcccacacagcgagtgctgggagacgcggctcggccaa
gacctgtaccgcctggtggtcatggatttcatcttttcactcctgggaacgttcttcatc
gagttcgtgtggcggttgcttctgtcgtcatcatcgtcgtcgtcgtcatgcagggggaag
agttcgtccgagccggagcagcaagggtcgcacaagcccgagtttgacatcgcgaggaac
gtgctcgacctcatctacggacaaacgctcgcgtggctcggcatcttcttcgctcccctg
ctgccgctggtgcagctgatcaagctgatcatcctcttctatgtcaaacggagaagcctc
tacctcaactgccagccacccaccaaaccctggcgtgcctctcagatgtccaccatcttc
ctgctcctgctctttttcccgtcgttcttcagcgtcgtggcggtggtggcggtcaccatg
tggacgcgtgaaccttctccggggtgcgggccgttccgcgggctcccgctggcctacgac
gccgtgcggcgctgggccgcgtcgctccccttcggctcggcggcaatcgcctggatctac
cacaacctcgtcgagagcccaatcttcttcttcgcggcaacaagcctcgtgttattgatc
atctacatcaacgtacagattttggccgcgcagaggcacgtgattgagctgctgcaagcg
cgaattgagcacgagggccaggacaagatattcgttctggagaaactgcgggaggagcac
aagcggcagatggaagtgaaggcggcgaggcagagcaagcggagtcgacaaaaagacaag
aaaaactacagcgcgcagatgtggccctgccaagcagacttatcctga
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