Petromyzon marinus (sea lamprey): 116946258
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Entry
116946258 CDS
T09614
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116946258
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmrn03310
]
116946258
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116946258
Nuclear receptors [BR:
pmrn03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
116946258
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116946258
NCBI-ProteinID:
XP_032817177
UniProt:
A0AAJ7THX8
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Position
2:complement(10863169..10933633)
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AA seq
561 aa
AA seq
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MASAGGVGAKGTGGGGSCSSPGAGGPLCGYPVPVPYPFLFPGAGSGFPGNFAPPLNGHHY
HHHQQQQQQQAHHRAPSHPQHPAAAAAAAAALPPPLPLGYSSTTSSSSPSTIDTQSSSSG
SEELLPSPPSPPPPPRTYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRD
KSCIINKSTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKRKEVVARSPEIVPRSYELSPEQ
EQMVDKIRCAHQETFPSLCQLGKYTTNSCADHRVQLDLGLWDKFSELSTKCIVKIVEFAK
RMPGFPSLTIADQITLLKAACLDILILRICSRYTPEQDTMTFSDGLTLNRTQMHNAGFGP
LTDLVFAFASQLLPLEMDDTEAGLLSAICLICGDRQDLEEPQKVERLQEPLLEALKLYVR
RRRPSKPHMFPKILMKITDLRGISAKGSERVITLKMEIPGSMPPLIQEMLENSIEGQEDP
PAETEEPTKANGGTGSSAGGGDGGDSTAVAAVAPASATVGGGAKPCGGDAPVANVQGSSG
TLEAAACMAVPIGQMQLADPF
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgctggaggagttggggccaagggcactggcggcggaggctcgtgctccagc
cccggcgccggcgggcccctctgcggctacccagtccccgtgccgtaccccttcctgttc
cccggcgccggctctggtttcccgggcaacttcgcgccgccgctcaacgggcaccactac
caccaccaccagcagcaacagcagcagcaggcccatcacagggcgccgtcgcatccgcag
cacccggcggcagcagcggcggcggcggcggcactgcccccgccgctgccgctgggctac
agcagcaccacgtcctcctcctcgcccagcaccatcgatacgcagagcagcagcagcggc
tcggaggagctactgcccagccccccctcgccgcctccgcccccacgcacctacaagcca
tgcttcgtgtgtcaggacaagtcctccggctaccactacggagtgagctcttgcgaggga
tgcaagggtttttttcgcagaagcatccaaaaaaacatggtgtacacttgccaccgggac
aagagctgcataataaacaagagcacgcgcaaccgttgccagtactgccgcttgcagaag
tgtttcgaagtcggcatgtcaaaggaggcggtgagaaacgaccgcaacaaaaaacgcaag
gaggtggtggcgcgtagcccggagatcgtcccccgcagctacgagctgagccccgagcag
gagcagatggtcgacaagatccgctgtgcccaccaggagaccttcccgtcactgtgccag
cttggcaagtacacgacgaactcgtgcgccgaccaccgcgtgcagctggacctgggcctg
tgggacaagttcagcgagctctccaccaagtgcatcgtcaagatcgtggagtttgccaag
cgtatgccgggcttccccagcctcaccatcgccgaccagatcacgctgctcaaggccgcc
tgcctcgacattctgatcctgcgcatctgttcgcgctacacgcccgagcaggacacgatg
acattctcggatgggctgacgctcaaccgcacgcaaatgcacaatgcgggcttcggtccg
ctcaccgacctcgtgttcgcatttgcgagccagctgctgcccctggagatggacgacacg
gaagccgggctgctcagtgccatctgcctcatctgtggagaccggcaggacctcgaggag
ccacagaaggtcgagcggctgcaggagccgctgctcgaggccctcaagttgtatgtgcgg
cggcgccggcccagcaagccccacatgttccccaagatcctcatgaagatcaccgacctc
cgcggaatcagcgccaaaggatctgagcgggtcatcactctcaagatggagatacctggc
tccatgcctccgctcatccaggaaatgctggagaactcaattgaggggcaggaggatccc
cctgccgagacagaagaacccacgaaggccaacggcggcacgggcagcagtgcaggtggt
ggcgatgggggcgatagcaccgcggttgcggctgtagcgccagcctcagcgacggtgggc
ggaggagccaagccctgtggcggagacgcaccggtggcgaacgtccagggatcctcgggg
acgctggaagctgcggcctgcatggccgtgcccatcggtcagatgcagctcgccgatccg
ttctga
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