Petromyzon marinus (sea lamprey): 116946279
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Entry
116946279 CDS
T09614
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04020
Calcium signaling pathway
pmrn04080
Neuroactive ligand-receptor interaction
pmrn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116946279
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116946279
04082 Neuroactive ligand signaling
116946279
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116946279
Ion channels [BR:
pmrn04040
]
Ligand-gated channels
Glutamate (ionotropic)
116946279
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
116946279
NCBI-ProteinID:
XP_032817216
UniProt:
A0AAJ7THZ8
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All DBs
Position
26:complement(12323216..12615944)
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AA seq
1467 aa
AA seq
DB search
MAPCCFSMGTRDLVGCLLHLLLLTQLLLLPPPVAESAAGDPAAKGSDHPVVNVAVVFGGT
SYLLFTKGAADRKELPSLPISVNVITSVINDTNPVSIMVELCDLIARKKVHGILFGDDTH
QEAIGQVLDVFSSQTAIPILGIYGGSSVVMSNKEKGSLFMQFGASLHQQARVIMKLMEEY
DWNQFSIVTSLRPGHVDFVSSLRSIIDNSFVGWDIQAIITVDMKGDDEAKIETLLKKVTT
KVNLLYCSRLEAMHLFGIAERVGLTAPGTVWVAPGLSYGDEDEVPKKFPVGLLSVSFDVW
DYDFLLRVRDGVAIIASAVYNSFLEYGHIPETATSCDNLDEGRRRQNNVTRFLKNVHWNG
QDFSFKSNGYLARPTMVVKVVNKRRLWQKVGKWENGLMMLKYPIWPRYEFSSSTIKDERH
LSIVTLEERPFVIVENVDALTGTCMRSTVACRQEINMTDTSGDKSPYVKRCCKGFCIDIL
RKLSTTVRFTYDLYLVVNGKHGKKIQGVWNGMVGEVEQKRAHMAVGSLTINEERSQVVDF
SVPFVETGISVMVSRSNGTVSPSAFLEPFSAAVWVMMFILCLMLSAIAVWLFEYLSPVGF
NRNLASGKETGGPTFTIAKSIWLLWALVFNNSVPVENPRGTTSKFMVSVWAFFAVIFLAS
YTANLAAFMIQEEYVEQVSGLSDNKFQKPDQQSQTFRFGTVPNGSTERNIRNNYPEMHAY
MSRYNQKNVAEALRSLKKGKLDAFIYDAAVLNYMAAKDEGCKLVTIGSGKVFATTGYGIA
LQKSSKWKRSIDLALLQFFGDGEMDELGKNWLSGVCLYDKNEVMSSKLDIDNMAGVFFML
LVAMCLSFLVFLSENFFYRFGRHWTKPEPAKKPGLLFIVSRAIYSCVHGIKITKDKDDFH
RMAKNAYKKNSSIMGLLTVARNMASLTQVNGPDAAATRVNRAGQPACSVAADKSAAEHPT
GRAALNNSDQWNRCAAAAAEVQLARDPAYQEDYVSEAEMSYPYLKNNQRFMEANVAAPAA
TGSYTPRDHSPAQISTNLHHFGAHPDVHRPVAKSREMLSASPCLDFKSSQRDVGESFIPM
CEIPQTRLEIPALTYNTDVESIHGNNTDIDDISECNSQYHSGKRSGRPKSTPYGKLARDY
KDVGRIPSRGSSQDKEIYGKATLNTLSRAMPEDWNNQARPSFCSEIVYRSDMLEPGIQIK
RSSSIPDHGATAQTTSAAVPSHHTPEKECSICKVKYQEPPSSARAECYRHCPSRLDECTG
SCLNQCCPGCACGSGAGKTDGEQTSVTLGRSALERHASCVHADEECCYGVTLPPPCITPN
PELRCRQDDRCCINQAIGSNYSTASKSDFCAIKSDPGGSVDSLRGFKVKPHRRLENELNV
FGSLKTPYASDLHTQAFSDTEMLYENINVPDIRRHRQPALGRPLNSGGKLSNGPVNVKGP
GRASKSPHSHTPNMRHAGCKHSMESEV
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtgctgctttagcatgggcactcgcgacctcgtcggatgcctcctccacctc
ctcctcctcacccagctgctactgctgccgccgccggtagcggagagcgcagcgggggac
cccgccgctaaagggagcgaccaccccgtggtgaatgtcgcggtggtgttcgggggtacc
tcgtacctccttttcaccaagggcgccgccgacaggaaggagctgccgagcctgcccatc
tcggtcaacgtcatcacgtcggtcatcaacgacacgaaccccgtgagcatcatggtggag
ctgtgcgacctcatcgcccgcaagaaggtgcacgggatcctgttcggagatgacacccac
caggaggccatcggccaagtcctggatgtcttctcctcccagacggccatccccatcctg
ggcatctacggagggtcgtcggtggtcatgagcaacaaggagaaagggtcgctgttcatg
cagttcggagcatcattgcatcagcaggcgcgtgtcatcatgaagctcatggaggagtac
gactggaatcagttcagcatcgtcacgagcctccgcccggggcacgtggacttcgtgagc
agcctgcgcagcatcattgacaacagcttcgtgggctgggacatccaagcgatcatcacg
gtcgacatgaagggcgacgatgaggccaagattgaaaccttgctaaagaaggtcaccacc
aaggtgaatctcctgtactgctctcgcctggaggccatgcacctatttggcatcgcggag
cgtgtgggactcaccgcacctggcaccgtgtgggttgctcccggcctcagctacggagac
gaagatgaagttcccaagaagttccccgtgggcctgctgtctgtctccttcgacgtgtgg
gattacgacttcttgctgcgcgtgagggacggcgtcgccatcatcgcatcggctgtctac
aactcgtttctggaatacggacacatacccgaaaccgcgacgagctgcgacaatctggac
gaggggaggaggcggcagaacaacgtcacgaggtttctgaaaaacgtgcattggaatgga
caagatttctccttcaaaagcaatgggtacctggcgaggccgaccatggtggtgaaagtg
gtgaacaagaggaggctctggcagaaggtcggcaagtgggagaacgggctgatgatgctc
aagtacccaatatggccacgctacgagttctcgtcgtcgaccatcaaggacgagcggcac
ctgagcatcgtgacgctggaggagcgccccttcgtcatcgtggagaacgtggatgcgctc
acgggcacctgcatgcgcagcacggtcgcctgccgccaggagatcaacatgaccgacact
tcgggggacaagagcccctacgtgaagcgctgctgcaaaggcttctgcatcgacatcctc
aggaagctctccaccacggtcaggttcacctacgacctttacctggtggtaaacgggaag
catggaaagaagatacagggcgtgtggaatggcatggttggagaggtggagcaaaagaga
gcgcacatggcggttggctcactcactatcaacgaggaacgctcgcaggtggttgacttc
tctgtgcctttcgtggagaccgggataagcgtgatggtgtccaggagcaacgggacggtg
tcaccctctgcattcctcgagcccttcagtgctgccgtctgggtgatgatgtttatcctc
tgcctcatgctgtccgccatcgccgtgtggctcttcgaatacctgagcccagtggggttc
aacagaaacctggcgagtgggaaagaaacgggtgggccgaccttcaccatcgccaaatcc
atttggctgctgtgggccctcgtcttcaacaactccgtgccagtggaaaacccacgtggc
accaccagcaaattcatggtgtccgtctgggccttctttgccgtcatattcctggccagc
tacacggccaacctggccgccttcatgatccaggaggagtacgtggagcaagtgtccggc
ctcagcgacaacaagtttcagaagccggatcagcagtcacagacatttcgctttggcacg
gtgcccaatggcagcacggagcgcaacatccgaaacaactaccccgagatgcatgcgtat
atgtcccgctacaaccagaagaacgtggccgaggccttgcgaagccttaagaaaggcaag
ctggacgcgttcatctacgacgccgcggtgctcaactacatggcggccaaggacgagggg
tgcaagctggtgaccattggcagcggcaaggtgttcgccaccacgggctacggcatcgcg
ctgcagaagagctccaagtggaagcggtccattgacctggccctgctgcagttctttggc
gacggggagatggacgaactgggtaagaactggctctccggggtttgtctctacgacaag
aacgaggtgatgagcagcaagctggacatcgacaatatggccggcgtattcttcatgctg
ttggtggcgatgtgcctcagcttcctcgtcttccttagtgagaacttcttttaccgcttt
gggcgccactggaccaagccagagccagccaagaagcccgggctgctgttcatcgtcagc
agggccatttacagctgcgtacatggaatcaagattaccaaggacaaggacgacttccac
aggatggccaaaaatgcctacaagaaaaactcaagcatcatgggcctcctgacggtggcc
aggaacatggcgagcctcacgcaggtgaatgggcctgacgcggctgccactcgtgtcaac
agggcgggccagccggcctgttcagtggctgccgacaaatcggccgcggagcacccgaca
gggcgagccgcactcaacaacagcgaccagtggaaccgctgcgccgcggccgctgcagaa
gtgcagctcgcgcgcgatccggcctaccaggaggactacgtgagcgaggccgagatgtcg
tacccttacctcaaaaacaaccagcgcttcatggaagccaacgttgcagctcctgccgcc
actggcagctacaccccacgggaccacagcccggcgcagatctcaaccaacttgcatcac
tttggcgcgcacccagatgtccaccggcccgtcgccaagtcgcgggaaatgctgtctgcc
tcgccttgcttggatttcaaaagcagccagcgggacgtcggggaatctttcattccgatg
tgtgaaattcctcaaactcggcttgagattccagcgttgacttacaacactgacgttgag
agcattcacgggaacaacaccgacatcgacgacatcagcgaatgcaacagccagtaccac
tctggaaagcgcagcggcagaccaaagagcacaccgtatggaaaactcgcaagagactac
aaagatgtgggaaggattcccagtcggggttcaagccaagacaaagagatctatggcaaa
gccactctcaacacactttcacgtgcgatgcccgaagactggaacaatcaggcgaggccg
tctttctgcagcgagatcgtgtataggtctgacatgctggagcctggcatacagatcaag
agaagcagcagcatccctgatcacggggcgactgcacagacaacctctgccgccgttccc
tcacaccacacgccagagaaggagtgcagcatctgcaaggtaaaatatcaagagccgcca
tctagcgcaagggctgagtgctacagacattgcccatcgcgcctggatgaatgcacgggt
tcctgcctgaaccagtgctgcccgggctgtgcctgtggcagtggcgctgggaaaacagat
ggcgagcaaacaagtgtgacattggggcgaagtgcgctggagcggcacgcctcttgcgtg
cacgcggacgaggagtgctgctatggagtcactctgcctcccccgtgcatcactcccaac
cccgagctgcgctgtagacaggatgatagatgttgcatcaaccaagcaatcggttccaat
tactccacagctagcaagagtgatttttgtgctatcaagtcagaccccggaggaagcgtc
gactccttgcgaggctttaaagtcaaaccgcaccgtaggcttgagaacgaactcaatgtt
ttcggctccctcaaaacgccgtacgcatcggacttgcacacgcaagcgttctccgatacg
gagatgttgtacgaaaatatcaacgtgccagacatcaggaggcacagacagcccgcattg
ggcaggccgctaaactcggggggtaagttgagcaacggtcccgtgaatgtgaaagggccg
gggcgggcaagtaaatctcctcacagccacaccccaaacatgaggcatgcgggctgcaaa
catagtatggagtccgaggtctga
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