Petromyzon marinus (sea lamprey): 116946471
Help
Entry
116946471 CDS
T09614
Name
(RefSeq) human immunodeficiency virus type I enhancer-binding protein 2 homolog
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116946471
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116946471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_16
NOA36
TFIIIA_zf-C2H2
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
116946471
NCBI-ProteinID:
XP_032817267
UniProt:
A0AAJ7X162
LinkDB
All DBs
Position
27:9365335..9419908
Genome browser
AA seq
2554 aa
AA seq
DB search
MTSTGPVAPPPLPPPLPPPASMIGKDSAVEQAGRSPGKAVDAADRPRASAATSLEAAGRP
VELGPAKPAVVDRHGDRDDDRSGPTDRAAVAGVAHVEWRRAAACSGREEAGERPALLAEP
HSKANHVQEQQRQQQQQQKQCEEWEHCLGALTVPSRGRRRSRGGRSHRERLLTRLPPAQL
GPDLETPGPAWSPGRSPPSSAVRGKRWPGAAHEPPPPHGTSGACGGVGRRRRHYCRDGED
KLKKPGKYACSYCGRACAKPSVLKKHVRMHTGERPYPCLACGFSFKTKSNLYKHCKSHAH
AVRATPLWPADESGKGLAPGVDSEDPPGGPSDGERTDTDVECCVDELAPRDIDASAGGAF
KARQEIWTSPRAAPALFGEEQEVKEEVPSRCFANKGVSDARSEEFLPRETMGKGNGVGEG
EVTPGLAASALPQMVVVAAGQGGRAVAESGQRSVGVQQQAPTAAASDNDLRSAKHRLWRK
RELESNSSGHLLTPSPFSSKGSTDSGYFSRSGSTELSLASPLAPITVTCTGGGGGGYNAP
SFAFQGSAGRGRVTERYAHTGWRGETVEDDEEDGEEEGGPADARTWSDPALSRRGGGAGA
GSGAGTQGPHPCHDSGRRRSSSADPPVSVVSGGAKCQSGEFLDVPVFETGGFFRSNSMPT
CNPSRSGHSPAGHPAGASLSFDECFPRKGGSIGGSSPALAYGTNPRPLVRQQAVELPACR
DIQGRQFHEQTKVTSVIWQSSGSLLSETVVPLGNKTAVAPSCQGDNVSVNRTERDVVTAR
LFHCPGALDRTSLQGKRRKPKSVRDEDEPDFVTGETLVSGGGEPVQEPPMDVTGVGAGPT
AVLHWHEHTPFGKRESPVGAIANTPSESPADAAAGFVPRRGQSLESVVGRHAGKNEISVI
QHTKLLGRPRSFEKADAGRSGCVVLRQSLSADQARDSVTVRQNFPATAASEKEDGGAKMR
GGAQPDPQAPRNGRLIRQSKIPEILVTVEPDGDQQQNDYLKEKPGKKRDEEFQWPRRSET
LEKLPAEKLPPKKKRLRLSELGNASIESSNDSSVSAPLSRSPSADGTLSRCSSLSSASLD
HAEVGDDEKPKKEPAEKSGEEGAALFLTVPGAPPSPLQPPGGGMRRTASEHEPCGAGPGP
QGGRSRSFDDGILSAPCVPVADGFGRAAAAGERRKAYLEHLASLNGHPEAARAAASAMAV
DGYLHLHSAKEYSKLLESCGASPADVQQQSQRQFFRREIPQRIGAYALSSERPGSKPYLL
EHALTVQRLDSELHRPNLQWAPHHASVPPPFPPLPLTHRPHTQNNLLLCHQQKQHFPRHA
FQNPFERFHSESSSRPPAWQAKAVQQAVPSHVADTRSMGAVSKQWRSTPVDVGLKNHRSS
DPQHTPSANTTAPHVAHAALPRADVGAALALRTCGRVLQPSPLASAVPVRRPSVLEPHPG
RAIFTSPSQLAHPRLCQPAVVVCHVTGEEGGAALMGSSDEAPQRSARAATPPPLRGEASH
LGVSASVLQRDQCAARLGDIMQAAPPGCQLLPGASSRLGLDKGEDRPRGTADPSPRRGTN
GEVRKQAEPPRLRKPVLVRQFCTTEPVERDGSPARCDAAVSASPALLPAVPGARLGDVQG
APADDARTSELPSQQPDGHGLTDTTAAPCPPQGLATSKSAVQVRVLLPAGAAAHGGSGSI
TVPVLQTVATPSLLVHVGPRPGLAVLVADLAEVQQLILPGLHTLTPASWCLLNARARPST
VADTTTTTTTDGKASVYGPWEPAKSGDSLCGGILPGVSTHAALALLRSRQRAGPSTYSTA
GACPANACALVHSGWWRRPHVAQPIPAVKVCTPLGKPTPTVAGSREKELEREQARESARE
SARERSAKGHHDSPSRAAKPALPCRIKIFDGGYKSNEEYVYVRGRGRGKYVCEECGIRCK
KPSMLRKHIRSHSDLRPYRCHICSFAFKTKGNLTKHVKSKAHSKKCLEMGMSAMMGDDPG
EQDPEWQPSPGAREDHQFSDADDSDRDRDDDDDDDDEDDEDDNDEGLAALAALRSDGNLG
SASPLGSWEPCGTGEPGARSAGGWPSTADAAFDDDDEVARLTLRLRASLHGAASISAAHP
SPPPRHDAAPAFAVTPGGSSPSQCSRALLGRSLAGGGTRSPPYDAPGRGARPGKGAPLAP
SPNRLGVLLERAMRDRPRLAGGCSPSRPRAVPRDGSPAPGRHGAFRTHSLSPYRRDVARD
RPPSPGGAGRTHSLSPHRGGAARLTDDPAVVAAAPPPATARSPPALAVRGAGGGRADPLV
SAAPRPQQPPFADAARCGLTASAQHPGSLAGDPPGSKGRGSLYEEQAAQCYAAVGPTSGN
GAHAQPPDDRHFGATPGGPARPFPSKPRQLSTRLLQLPKALPHAVAVVGSVHMIDMSRVA
RAAGSTSSFSSSSLDEEAAVAFAPERLAEPSFAGAPRRRHRGTPPPVAGVVTSTAPDCPD
TFAFGSGHAAVRFRAEPPEFCAAAAAAARSGGTTATGRGGGDPCELAALPLSVSCSVVEA
VPPRPRRTEESGVHGSGRRPLPVSAGVSETAATT
NT seq
7665 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaccgggccagtggcgccaccaccacttcctcctcctcttcctcctcccgca
tcgatgatcggcaaggacagcgctgtcgagcaggccggtcgctctcccggcaaagctgtc
gacgcggcagacagaccccgcgcctcggcagccacatccctggaggccgcggggcggccc
gtggagctgggccccgccaagccggcggtggtcgatcgtcatggtgaccgtgacgacgat
cggagcggaccgacagatcgggctgccgtcgctggagttgcgcacgttgagtggcgccgg
gcggccgcttgcagcggcagagaggaagccggggagaggcccgcgctgctcgcagaaccg
cactcaaaggccaaccacgtgcaggagcagcagcggcagcagcagcaacagcagaagcag
tgtgaggagtgggagcactgcttgggagccctgactgtccccagccgtggaagaagaagg
tcgcgaggagggaggtcacacagagagcgcctgctcacgaggctgcctccagcgcagctg
ggccctgacctcgagactcccggccctgcgtggagccctgggaggtcgcctcccagcagt
gcggttcgcggtaagcggtggcccggcgcggcgcacgaaccgccgccgccacatggcacg
agcggtgcctgcggaggtgttgggaggaggaggcggcactactgccgggacggggaggac
aagctgaagaagccgggcaagtacgcgtgctcctactgcggcagggcatgcgccaagccg
agcgtgctgaagaagcacgtccgcatgcacacgggcgagcgaccatacccgtgcctggcc
tgcggcttctccttcaagacgaagagcaacctctacaagcactgcaagtcacacgcccac
gccgtgcgggccacgccgctctggcccgctgacgagtcgggcaaggggcttgcgcctggc
gtggactcggaggatccaccgggcggcccgtcggatggggagagaacggacacggatgtc
gagtgctgtgtggacgagcttgctccccgcgacatcgacgcctcagcagggggagctttc
aaagcgcgacaggaaatatggacatcgccacgggctgcgccggccctcttcggtgaagag
caggaggtgaaggaggaagtgccgagccgctgttttgcaaataagggcgtttcggatgca
cgcagcgaggaattccttccaagggagacgatggggaagggaaacggcgtcggcgaagga
gaagtcacaccgggcctggctgcctccgccctgccacagatggtggtggtcgcggcgggc
cagggtggccgcgccgtcgccgaaagcgggcagcggagcgtaggcgtgcagcagcaggct
cccacggcggcggcgagcgacaacgatctccgctcggcgaagcaccggctgtggcgcaag
cgggaactggagtcgaactcgtcggggcacctcctcacgcctagtccgttcagcagcaag
gggagcactgactcggggtacttctcccgctcgggcagcactgaactgtcgctggccagc
ccgctcgcgccgatcactgtcacctgcaccggcggcggcggtggcggctacaatgcgccg
tcattcgccttccaagggtcggcgggcaggggtcgagtgaccgagcgttatgcgcacacg
ggctggcgtggtgagactgtggaggacgacgaggaggacggcgaggaggagggggggcca
gcggatgcgaggacatggagcgaccctgcgctctctcgccgaggaggcggcgctggtgcc
ggcagcggcgccggtactcagggaccgcacccctgccacgactccggccgccgcaggagc
tcgagcgccgaccctcccgtgagcgtcgtctccggcggcgccaaatgccagagcggggag
tttttggacgtgcctgtgttcgagacgggcggtttcttccgcagcaattccatgccgacg
tgcaatccatcgcggagtggtcattcgccggctgggcacccagccggcgcaagcctgtca
ttcgacgagtgcttcccgaggaagggcggctccatcggcggatcctctccggcgctcgcg
tacggcacaaaccctcgaccgctggtgaggcagcaggccgtagagctcccggcctgcagg
gacattcaagggaggcagtttcacgaacagacgaaggtcacatccgtaatatggcaaagc
agcggcagcttgctctctgaaacggtggtcccgctgggaaataagacggccgtggccccg
agttgccagggcgataatgtgagcgtcaaccgcacagagagggacgtggtcacggcgagg
ctgtttcactgtccgggggccttggaccgcacctcgctgcagggaaaacggagaaaaccc
aaaagcgtcagggacgaggacgagccggactttgtgacgggcgagactttagtgtcaggc
ggaggtgagccggtgcaggagccgccgatggacgtcactggagttggcgcgggtcccact
gcggtgctgcattggcacgagcacaccccctttgggaagcgtgagtcaccagtgggggcc
attgccaacacgccgtcggagtcacccgccgatgcggccgccgggttcgtgccgcgacgc
ggccagagtctggaaagcgtcgtgggccggcatgcaggcaagaacgaaatctccgtcatc
cagcacaccaagttgctcggccgcccccgctcatttgaaaaggccgatgcggggcgctcc
ggctgcgtcgtgctccgccagtccctgtcggcggaccaagcccgagacagcgtcacggtt
cggcagaacttccctgcgacggctgccagcgagaaggaggatggcggtgcaaagatgcgt
gggggcgcgcagcccgacccgcaagcgccgcgcaacgggagactcatccggcaaagtaaa
attccggaaatcttggtgacggtggaaccggacggcgaccaacagcagaacgactacctc
aaggagaagcccggcaagaagcgggatgaagagttccagtggccgcggaggagcgagacc
ctggagaagcttccggccgagaagctgccccccaagaagaagcggctgcgcctctccgag
ctgggcaacgcctccattgagtcgagcaacgactcctccgtgtcggccccgctctcccgc
agcccgagtgcggacggcaccctctcgcgctgctccagcctctcgtcggcctcgctcgac
cacgccgaggtgggtgacgacgaaaagcccaagaaggagccagcggagaagtccggggag
gagggcgccgccctgtttctgaccgtgccgggcgcgccgccttccccgctccagccgccc
ggcggggggatgcgccgcaccgcgtcggagcacgagccgtgcggcgcgggccccgggcca
caggggggccgaagcaggtcgttcgacgacgggatcctgtcggcgccctgcgtccccgtc
gctgacggtttcggacgagcggccgcggcgggagagcgccggaaggcgtacctggagcac
ctggcgagcttgaacggacaccccgaggcggctcgcgcggcggcatctgctatggcggtg
gatggttatttgcacctgcacagtgccaaagagtactccaagctgctggagagttgcggt
gcctcaccggctgacgttcagcagcagtcccagcgtcagttcttccgccgagaaatccca
cagcgcatcggagcgtatgctttgtcttcggagcgtccaggatcaaagccatatctgctg
gagcacgctttgaccgtacagagactggactccgagctgcacaggccaaacctccagtgg
gctccccaccatgcctccgttccgccgccattcccgccgctccctctcacccaccgtccc
cacactcagaacaatctcctgctgtgtcaccagcaaaagcagcactttcccaggcacgcg
tttcaaaatcctttcgaacgctttcactcggagagctcgtctcgccctccggcttggcaa
gcgaaggctgtgcagcaggcagtgccgagtcacgtggcagacactcgctcgatgggagcc
gtgtccaaacagtggcgatcgacccccgttgacgttggcttgaaaaaccatcgctcgtcc
gacccccagcacacgccgtccgccaacacaaccgccccgcacgtggcgcacgcagcattg
ccgagggctgacgtgggggcggccctcgcgctgcggacgtgcggccgcgtgttacagccg
tcgccgttggcgtcagcggtgcccgttcgccggccctccgtcttggaaccccaccctggc
cgtgccatcttcacgtcgccgtctcagctcgcccacccccgcctgtgccagcctgccgtg
gtagtctgccacgtgaccggtgaggagggaggcgccgctctgatgggttcctctgacgaa
gcgccgcagcgttctgcgcgggcggcgacgccgccgccgctgcgcggcgaggcttcccat
ctcggggtttctgcttcggtcttgcagagggaccaatgcgccgcacgcctgggagacatc
atgcaggcggcgccgccgggctgtcaactgctacctggtgccagcagcaggttgggtctc
gacaaaggggaggatcggccccgcggcaccgccgacccatcgccgcggcgagggactaac
ggcgaagtgagaaagcaagcggagccccctcggctgaggaagccagtgctcgtccggcag
ttctgcacgacggagcccgtggaacgcgacggctcccccgcacgctgcgacgccgccgtg
agcgcgtcgccagcgttgttgccggcggtcccgggagcccgtcttggagatgttcaaggc
gcccctgcggacgatgctcggacctccgagctgccctcccagcaacccgacggtcacggc
ctcacggacacgacggccgcaccctgtccgccccaggggctcgccacctccaagtcggcg
gtgcaggtgcgggtgctgctgccagccggggcggcagcccacgggggctccggctctatc
acggtccccgtgctgcagacggtggccaccccgagtctgctggtccacgtgggcccccgg
ccgggcctcgccgtcctcgtggccgacctggccgaggttcagcagctgatcctgccgggc
ctgcacacgctcacgccggcgtcctggtgcctcctcaatgcccgggcgcgaccaagcacc
gtcgccgacaccaccaccaccacgactacggacggcaaggcctcggtgtatgggccgtgg
gagccggctaagagcggtgacagcctctgcggtggcattctccccggcgtatctacgcac
gctgcgctggcactcctgcggtccaggcagcgggcggggccgtccacctacagcacggcg
ggcgcctgccccgccaacgcctgcgccctcgtccactcgggctggtggaggaggcctcac
gtggcgcagccaataccggcggtgaaagtttgcaccccactggggaagccaaccccgacc
gtcgcgggcagccgcgagaaggagctggagcgagagcaagcgagggagagcgcgcgggag
agcgcgcgggagaggtcggcgaagggtcaccacgactctccgtcgcgcgctgctaaaccc
gcactgccctgccgcatcaagatcttcgatggcgggtacaagtcgaacgaggagtacgtg
tacgtgcggggccgcgggcgaggcaagtacgtgtgcgaggagtgcggcatccgctgcaag
aagcccagcatgctgcggaagcacatccgctcgcactccgacctccgaccttaccgttgc
cacatctgcagcttcgccttcaagactaaagggaacctcaccaagcacgtcaagtccaaa
gctcacagcaagaagtgcctggagatgggaatgagcgcaatgatgggagacgaccccggg
gagcaagatccggagtggcagccgtctccaggagccagggaggatcaccagttttccgat
gccgacgactcggatcgagatcgcgacgacgacgacgatgacgacgacgaagacgacgag
gacgataacgacgaaggattggcggctctcgcggcgctcagatccgacgggaacctcggg
agcgcttctcctctgggcagctgggagccgtgtgggactggagaacccggggcccgttcc
gccggaggatggccgagcaccgccgacgccgccttcgacgacgacgacgaagtcgcccgc
ctgacgctgaggctgcgagcatcactccacggcgccgcctccatctccgccgcgcatccc
tctcctccgccgcggcacgatgcggcgcccgctttcgcggtgacgcccggcggaagctcg
ccatcgcaatgctcgagggcactcctgggtcgctctctcgccggcggaggcacgaggtcg
ccaccgtacgacgcgccgggccgcggcgcgcggcccggcaagggagcgccgctggcgccg
tctccaaatcgcctcggcgttctgctcgagcgcgcgatgcgggaccggcctcgcctcgcc
gggggctgctcgccgagccggccgcgggcggtgccgcgcgacggctcgcctgcccccggt
cggcacggcgcgttccggacgcactcgctgtcgccgtaccggcgcgacgtggcgagggat
aggcccccgtcccccggcggcgcaggccgcacccactcgctctcgccgcacagaggcggc
gcggcccggctcaccgacgaccccgcggttgtggcggcggcgcctcctcccgccacggca
cgatccccgccggcgcttgccgtgcgcggtgctggcggcgggcgggcggacccgctggtc
tccgcggctccgcggccgcagcagcctccgttcgcagacgccgcccgctgtggcctgacg
gcttccgcgcagcatcctgggagtttggccggagaccccccggggagtaaaggaagaggc
tccttgtacgaggagcaggccgcccagtgctacgctgccgtcgggcccacgtccggcaac
ggcgcccatgcgcagcccccggacgatcgccacttcggcgccacccccggtggtcccgcc
cggcccttcccgagcaagccgcgccaactctcgacccgcctcctgcagctgccgaaagcg
ctgccgcacgcggtggccgtggtcggcagcgtccacatgatcgacatgagcagggtggcc
cgggccgccggctccacctcctccttctcctcctcctccctcgacgaagaggccgcggtg
gcgttcgcccccgagcgcctggccgagccgtcgttcgccggcgccccccgccgccgccac
cgcgggacgccgcccccggtcgcgggcgtcgtgacgagcacggcgcccgactgcccggac
acgttcgcgttcggctcggggcacgccgccgtccgcttccgggccgagcctccggagttt
tgcgcggcggcggcggcggcggcgaggagcggagggacgacggcgacggggaggggtgga
ggcgacccctgcgagctggcggcgctgcctctgtccgtctcgtgctccgtggtggaggcg
gtgcccccgaggccgcgccggacggaggaaagcggagtgcacggttccggacggaggccc
ctgccggtcagcgccggggtttcggagacggcggcgacgacgtga
DBGET
integrated database retrieval system
