Petromyzon marinus (sea lamprey): 116946559
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Entry
116946559 CDS
T09614
Name
(RefSeq) protein argonaute-1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116946559
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116946559
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116946559
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116946559
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
116946559
microRNA pathway
RISC loading complex
116946559
BRITE hierarchy
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
116946559
NCBI-ProteinID:
XP_032817463
EnsemblRapid:
ENSPMAG00000008422
LinkDB
All DBs
Position
27:complement(5517941..5555040)
Genome browser
AA seq
854 aa
AA seq
DB search
MDPGVEATAAGDVLPPHLQAPRRPGLGTVGKHIKLLANYFEVDIPKIEVHHYDLDIKPEK
CPRRVNREVVDYLVNRSNVQFFRDRKPVFDGRKNLYTASALPVGRDKVELEVTLPGEGKD
RVFKVALKWVGYVSWHALHDALAGRIMQVPQDPVQAVDVVLRHLPSMRYTPVGRSFFSSP
EGYSHPLGGGREVWFGFHQSVRPSMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDE
QPKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYKVCNVTRRPASHQTFPLQLDTGQTVE
CTVAHYFRDRHKLQLKYAHLPCLQVGQEQKHTYLPLEVCNILAGQRCIKKLTDNQTSTMI
KATARSAPDRQDEISKLMKNASFNVDPYVQEFGLRVRDDMTEVTGRVLPAPMLQYGGRSR
AVATPSQGVWDMRGKQFYCGTEIRVWAIACFAPQRQCQEDVLKGFTDQLRRISKDAGMPI
QGQPCFCKYAQGTDSVEPMFRHLKNTYMGLQLIVVVLPGKTPVYAEVKRVGDTLLGMATQ
CVQVKNVLKTSPQTLSNLCLKINVKLGGVNNILVPQQRPAVFHQPVIFLGAEVTHPPAGD
GKKPSIAAVVGSMDAHPSRYCATVRVQHHRQEIIQDLGTMVRELLIQFYKSTRFKPTRII
FYRDGVSEGQFQQVLFHELLAIRDACIKLEKDYQPGITYVAVQKRHHTRLFCADRNERIG
KSGNIPAGTTVDTKITHPSEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSADELQVLTYQ
LCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSAEGSHVSGASNGRDAQALAKA
VQVHVDTLRTMYFA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggacccaggagtagaagctaccgctgcgggggatgtgctgccccctcacctgcaggcc
cctcgcaggcctggcctcggcacggtgggaaagcacatcaagcttctggcaaactacttt
gaggtggacatcccaaaaatcgaggtgcatcactacgacctggacatcaagcccgagaaa
tgtcctcgaagagtcaacagggaggtcgtggactacctggtcaaccgctccaatgtgcag
tttttccgggatcggaagccggtgttcgatggccggaaaaacctgtacacggcgagtgca
ctgcccgtcggaagagacaaggttgagctcgaggtgacgctgccgggcgagggtaaggac
cgtgtgttcaaggtggcgctcaagtgggtgggctacgtgagctggcacgcgctgcacgac
gcgctcgcgggccgcatcatgcaggttccccaggaccctgtgcaggcggtggacgtagtg
ctacgacacctgccctccatgcgatacacgccggtcggacgctcgttcttctcgtccccc
gagggatacagccacccattgggtggtggccgcgaggtctggttcggtttccaccagtct
gtgaggccgtccatgtggaagatgatgctcaacattgatgtgtcggccacggcgttttac
aaggctcagccggtgatagagttcatgtgcgaggtgctggacatccgtaacatcgacgaa
cagcccaagccactcaccgactcccagcgcgtgaagttcacgaaagagatcaaaggcctc
aaggtcgagatcacgcactgcgggcaaatgaaacgcaagtacaaggtgtgcaacgtgacg
cggagaccggccagccaccagacgttccctctgcagctggacacgggccaaacggtggag
tgcacggtggcacactacttccgcgaccggcacaagctacagctcaagtacgcacacttg
ccctgcctgcaggtcggccaggagcagaaacacacctacctgcctctcgaggtgtgtaac
atcctggcgggacagcgctgcattaagaagctcaccgacaaccagacgtccaccatgatc
aaagccacggctcgctcagcccccgatcggcaggacgagattagcaagctgatgaagaat
gctagcttcaacgtggacccgtacgtgcaagagtttggcctgcgggtgcgtgacgacatg
acggaggtgacaggcagggtgctgcctgctccgatgctgcagtacggaggccggagccgg
gctgtggcaacgcccagccagggagtgtgggacatgcggggaaagcagttctactgcggc
acggagatccgtgtttgggccatcgcctgcttcgccccacagcgccagtgccaggaggac
gtgctcaagggcttcacggatcagctgcggcgaatctctaaagacgcgggaatgcccatc
cagggccagccgtgcttctgcaagtacgcacagggcacggacagcgtagagcccatgttc
cgccacctcaagaacacctacatgggcctgcagctcatcgtggtggtgctgcctggcaag
acgcctgtttacgcggaggtgaagcgcgtgggagacacgctgctgggcatggcgacgcag
tgcgtgcaggtgaagaacgtgctcaagacgtcgccgcagacgctctccaacctctgcctc
aagatcaacgtgaagctcggcggggtcaacaacatcctcgtgccgcaacagaggccggcc
gtgttccaccagcccgtgattttcctgggtgcagaggtcactcatcctcctgccggtgat
gggaagaagccttccatcgccgccgttgtgggcagcatggacgcccacccgagccgctat
tgcgccacggtgcgtgttcagcaccaccggcaggagatcatccaggacctaggcaccatg
gtgcgtgagctgctcatccagttctacaagtcgacgcgcttcaagcctacgcgcatcatc
ttctaccgcgacggcgtctccgagggccagttccagcaggtgctgttccatgagctactg
gcgatccgcgatgcttgcatcaagctggagaaggactaccagcccggcatcacctacgtc
gctgtacagaagcgacaccacacgcggctcttctgcgccgaccgaaacgagcggatcggg
aagagcggtaacattccggcaggaacgacggtcgacacgaaaatcacgcaccccagcgag
tttgacttctacctgtgcagccacgcggggatccagggcacgagccgcccctcccactac
cacgtgctgtgggacgacaaccgcttctctgcggacgagctgcaggtgctcacctaccag
ctgtgccacacgtacgtgcgctgcacgcgctccgtctccatccccgcgcccgcctactac
gcccgcctcgtcgccttccgtgcgcgataccacctggtggacaaggagcatgacagcgct
gaggggagccacgtgtccggcgcgagcaacgggcgtgacgcgcaggcgctggccaaggct
gtgcaggttcacgtggacactctgaggaccatgtacttcgcctga
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integrated database retrieval system
