Petromyzon marinus (sea lamprey): 116946563
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Entry
116946563 CDS
T09614
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116946563 (TAF1B)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
116946563 (TAF1B)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
116946563
NCBI-ProteinID:
XP_032817471
UniProt:
A0AAJ7TIG5
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Position
27:5616732..5635918
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AA seq
554 aa
AA seq
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MHEDANSYTECCVVCQDVNWGITDERSFYCKSCNNVTDKVLECDDPSAYFDASAKVITIS
KGIRGKDKYGRSYRWYTCEGFQMVLCMQADALQALGVNARLKDDLLMHMWRRYLQYTARA
YVEPRESDAPAKSPMTSPLDSGSELNVNPMDLETTSLKSFSAWSSQSDATSGDVGSGISS
GDECEPKMGSVDGKLLSHSGRVEDLHLSLSLAFCHLALMWLRQPPTLLDLLRLVRCGTVP
YTSAFESFPEEMKIYGHDARFFRPTWLPRYHLVLRESQLLAEFLKLPCFPEVTERSIVHP
HALVASFLHRLCLPDSLLPWCCWVMALPKLLIPSRLTFDPTARRWETLRLELVAVASILV
ALKLLLVLDDCTEWKISRAVRKLVAKPGEPWFCFDDWCRAATALASRERDAEARVGSRRS
WVQSRTFYYTSRSYHCMCAKRQKLALDLEQQVRRSLAGVEQQKAPGPGADSASRFYGHAV
VGVMDKRLAKRVGSSGRYWSTPRQPGKHGLPHSFRFVLEVTASLLGAEQSDLLSAVCSIE
KKLLPAVRALPKQR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaggacgcgaattcgtacacggagtgctgcgtggtgtgtcaggacgtgaactgg
ggcatcacggacgagaggagcttctactgcaaatcgtgcaacaacgtgaccgataaggtg
ctggaatgcgatgaccccagtgcctactttgacgcctcggccaaagtcatcaccatcagc
aagggcatcaggggaaaggacaaatatgggcgcagctacaggtggtacacgtgcgaaggc
tttcagatggtgctgtgcatgcaggcagatgccctgcaagctttgggcgttaatgctcgc
ctcaaggatgatcttctgatgcacatgtggaggcgctacctgcagtacacggccagggca
tatgtggaacccagggagagtgacgcccctgctaagtccccaatgacgagcccgttggat
agcggcagtgaactgaacgtgaaccccatggacctggagacgacgagcctgaaatccttc
tccgcctggtcgtcccagagcgacgccacaagtggtgatgtcggcagcggcatctcctct
ggtgatgagtgcgagcctaagatgggctcggtggatgggaagctgctgtcccacagcggc
cgcgtggaagaccttcacctctccctctcgctcgccttctgccacctggccctgatgtgg
ctgcgccagccgcccaccctgcttgacctgctgaggctcgtgaggtgtggcactgtgccc
tacaccagcgcctttgagagctttcccgaggagatgaagatctatggtcacgatgctcgt
ttcttcagaccgacttggttgccccgctaccatctagtcctgcgcgagtctcagctcctc
gccgagttccttaaactgccgtgcttccccgaggtgacggagcgaagcatcgtgcaccca
catgcgctcgtagcgagcttcctgcatcgcctctgccttcccgactcgctgctgccctgg
tgctgctgggtgatggccttgccaaagttgctcattccctctcggctgacctttgacccc
acggcacgacgctgggagacgctgcggctggagctggtggcggtggcgagtatcctggtg
gcgctcaagctgctgttggtgctcgatgactgcacggagtggaaaatatcgagagccgtg
agaaagctcgtcgccaagccaggagagccgtggttttgcttcgacgattggtgccgtgcg
gcgacagctctcgccagccgagagcgcgacgccgaggcccgcgtcggctcccggcggtcc
tgggtgcaaagccgtacgttctattacacctcccgcagctaccactgcatgtgcgccaaa
aggcagaagttggcgctggacttggagcagcaggtgcggcgctcactggccggcgtggag
cagcagaaggcgccggggcctggcgctgactcggcgtcgcgtttttacggccacgccgtc
gttggcgtgatggacaaacgcctcgcgaaacgcgttgggagcagcggacgctactggagc
acgccccgccagcctgggaaacatgggcttccccacagcttccgctttgtgctggaagtg
acggcatcgctgctgggggccgagcagagcgacctcctcagcgcggtttgctctatcgag
aagaagttgctgccggccgtgcgtgcgctgcccaagcagcgctag
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