Petromyzon marinus (sea lamprey): 116946610
Help
Entry
116946610 CDS
T09614
Name
(RefSeq) syndecan-2-A-like
KO
K06257
syndecan 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04512
ECM-receptor interaction
pmrn04514
Cell adhesion molecule (CAM) interaction
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116946610
04514 Cell adhesion molecule (CAM) interaction
116946610
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116946610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116946610
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pmrn04090
]
116946610
00535 Proteoglycans [BR:
pmrn00535
]
116946610
Membrane trafficking [BR:
pmrn04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
116946610
CD molecules [BR:
pmrn04090
]
Proteins
116946610
Proteoglycans [BR:
pmrn00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
116946610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
DIM
Motif
Other DBs
NCBI-GeneID:
116946610
NCBI-ProteinID:
XP_032817576
UniProt:
A0AAJ7TIN2
LinkDB
All DBs
Position
27:7316936..7380858
Genome browser
AA seq
303 aa
AA seq
DB search
MRWISVILSLFLLGLAIEAASAQASDIFIDDEGSGVDGQSDKDDEDDSDEFGSGATTTDT
ESASVTSGPVTSGPVTSDPVTSGPVTSGPVTSGPVTSGPMTSGPVVPSEAPTDENEQPTS
PHEQPGSSPPQGTDHAQGEGTSVEAATTQAADAPSPPLVPVDGSTESDVATATTTTGSSS
STVDGHVGGHVGKAHGRMGQPAVVEEPPIIPVHKEEVKEGQRGPPDMPATASAAVNDSPF
EKTEVLAAVIAGGAVGVVMAALLVAFLVHRIRKKDTGSYALDPNKPPQTNGDYQIAPTQE
IYA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggatttcggtcatcctgagtctcttcttgctcggcctggcaatcgaggcggcg
tcggcccaggcctcggacatcttcatcgacgacgagggctccggggttgacggccagtcg
gacaaggacgacgaagatgactccgatgagttcggatcaggcgccacgacgacggacacc
gaatcagcgtccgtgacctcgggccccgtgacctcaggccccgtgacctcggaccccgtg
acctcgggccccgtgacctcgggccccgtgacctcgggccccgtgacctcgggccccatg
acctcgggccccgtggtgccgtccgaggcccccacggacgagaacgagcagcccacgtcc
ccccacgagcagcccggatcctcgcccccccagggcacggaccacgcgcagggggagggc
acgagcgtggaggcagcgactacgcaggctgcagacgccccgagcccaccgctggtccca
gtcgacggaagcacagagagcgacgtcgccaccgccaccaccaccaccggcagctccagc
agcaccgtggacggccacgtgggcggccacgtgggcaaagctcacggccgcatgggtcag
cctgccgtggtggaggaaccgcccatcatccccgtccacaaagaagaggtcaaggaaggt
caaaggggacctcccgacatgccggccaccgcaagcgcggcggtgaacgacagccccttc
gagaagacggaggttctggccgcggtgatcgcggggggagcggtcggcgtggtgatggcg
gcgctgctcgtcgccttcctcgtccaccgcatccgcaaaaaggacacgggcagctacgcg
ctggaccccaacaaacccccgcagaccaacggagactaccagatcgctcccacgcaggag
atctacgcctag
DBGET
integrated database retrieval system