KEGG   Petromyzon marinus (sea lamprey): 116946610
Entry
116946610         CDS       T09614                                 
Name
(RefSeq) syndecan-2-A-like
  KO
K06257  syndecan 1
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04512  ECM-receptor interaction
pmrn04514  Cell adhesion molecule (CAM) interaction
pmrn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116946610
   04514 Cell adhesion molecule (CAM) interaction
    116946610
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116946610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmrn04131]
    116946610
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pmrn04090]
    116946610
   00535 Proteoglycans [BR:pmrn00535]
    116946610
Membrane trafficking [BR:pmrn04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    116946610
CD molecules [BR:pmrn04090]
 Proteins
  116946610
Proteoglycans [BR:pmrn00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   116946610
SSDB
Motif
Pfam: Syndecan Glycophorin_A DIM
Other DBs
NCBI-GeneID: 116946610
NCBI-ProteinID: XP_032817576
UniProt: A0AAJ7TIN2
LinkDB
Position
27:7316936..7380858
AA seq 303 aa
MRWISVILSLFLLGLAIEAASAQASDIFIDDEGSGVDGQSDKDDEDDSDEFGSGATTTDT
ESASVTSGPVTSGPVTSDPVTSGPVTSGPVTSGPVTSGPMTSGPVVPSEAPTDENEQPTS
PHEQPGSSPPQGTDHAQGEGTSVEAATTQAADAPSPPLVPVDGSTESDVATATTTTGSSS
STVDGHVGGHVGKAHGRMGQPAVVEEPPIIPVHKEEVKEGQRGPPDMPATASAAVNDSPF
EKTEVLAAVIAGGAVGVVMAALLVAFLVHRIRKKDTGSYALDPNKPPQTNGDYQIAPTQE
IYA
NT seq 912 nt   +upstreamnt  +downstreamnt
atgcgctggatttcggtcatcctgagtctcttcttgctcggcctggcaatcgaggcggcg
tcggcccaggcctcggacatcttcatcgacgacgagggctccggggttgacggccagtcg
gacaaggacgacgaagatgactccgatgagttcggatcaggcgccacgacgacggacacc
gaatcagcgtccgtgacctcgggccccgtgacctcaggccccgtgacctcggaccccgtg
acctcgggccccgtgacctcgggccccgtgacctcgggccccgtgacctcgggccccatg
acctcgggccccgtggtgccgtccgaggcccccacggacgagaacgagcagcccacgtcc
ccccacgagcagcccggatcctcgcccccccagggcacggaccacgcgcagggggagggc
acgagcgtggaggcagcgactacgcaggctgcagacgccccgagcccaccgctggtccca
gtcgacggaagcacagagagcgacgtcgccaccgccaccaccaccaccggcagctccagc
agcaccgtggacggccacgtgggcggccacgtgggcaaagctcacggccgcatgggtcag
cctgccgtggtggaggaaccgcccatcatccccgtccacaaagaagaggtcaaggaaggt
caaaggggacctcccgacatgccggccaccgcaagcgcggcggtgaacgacagccccttc
gagaagacggaggttctggccgcggtgatcgcggggggagcggtcggcgtggtgatggcg
gcgctgctcgtcgccttcctcgtccaccgcatccgcaaaaaggacacgggcagctacgcg
ctggaccccaacaaacccccgcagaccaacggagactaccagatcgctcccacgcaggag
atctacgcctag

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