Petromyzon marinus (sea lamprey): 116946621
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Entry
116946621 CDS
T09614
Name
(RefSeq) elongation factor 1-alpha, somatic form
KO
K03231
elongation factor 1-alpha
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116946621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116946621
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116946621
03012 Translation factors [BR:
pmrn03012
]
116946621
04131 Membrane trafficking [BR:
pmrn04131
]
116946621
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116946621
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116946621
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116946621
Translation factors [BR:
pmrn03012
]
Eukaryotic type
Elongation factors
116946621
Membrane trafficking [BR:
pmrn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
116946621
Exosome [BR:
pmrn04147
]
Exosomal proteins
Proteins found in most exosomes
116946621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
DUF8497
Motif
Other DBs
NCBI-GeneID:
116946621
NCBI-ProteinID:
XP_032817595
UniProt:
S4S1N9
LinkDB
All DBs
Position
27:9956874..9962314
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETQKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPPYSSDRYNEIVKEVGTYIKK
IGYNPAAVGFVPISGWHGDNMLEASTNMPWFKGWKVERKDGNASGTTLLEALDAILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGVFTAQVIVLNHPGQINAGYSPV
VDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAMVDMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVEKKAATTGKVTKSAQKATGKAK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagactcacattaacatcgtcgtcattggccatgtcgactctgggaaa
tccaccagtaccggccatctcatctacaagtgtggcggcattgacaagcgtaccattgag
aagttcgagaaggaggccgctgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaagctgaaggccgagcgtgagcgtggtatcaccattgacatctctctgtggaagttc
gagacccagaagtactacgtcaccatcatcgacgctcctggccacagggacttcatcaag
aacatgatcaccgggacatcgcaggctgactgcgccgtcttgatcgttgcggccggagta
ggtgagtttgaggccggtatctcgaagaacggccagacccgtgagcacgccctgctcgcc
tacaccctgggtgtgaagcagctcatcgtcggcatcaacaagatggactccaccgagccc
ccctacagctccgaccgttacaacgagatcgtcaaggaagtcggcacctacatcaagaag
atcggctacaacccggccgccgtgggctttgtgcccatctccggctggcatggggacaac
atgctggaagccagcaccaacatgccgtggttcaagggatggaaggtcgagcgcaaggat
ggcaatgcttccggcaccactctcctggaggctctggatgccatcctgcccccgagccgc
cccaccgacaagcccctccgcctgcccctccaggatgtctacaaaattggcggtattggg
acagtgcccgtgggtcgtgttgagactggtgtcctgaagcccggcatggtggtgaccttt
gctcccgtgaacgtcaccactgaggtcaagtctgtggaaatgcaccacgaggctctcaca
gaggccgttcccggcgacaacgttggcttcaacgtcaagaacgtgtccgtcaaggatgtg
cgtcgaggcaacgttgctggtgacagcaagaacgacccgcccatggaggctggcgtcttc
accgcccaggtgattgtgctgaaccaccctggccagatcaatgctggctactcgcctgtg
gttgactgccacactgcccacattgcttgcaagttcgctgaactgaaggagaagatcgac
cgtcgctcgggcaagaagcttgaggacaaccccaagttcctgaagtctggggatgccgcc
atggttgacatggttcctggcaaacccatgtgcgtggagagcttctccgactacccaccc
ctggggcgctttgccgtgcgtgacatgaggcagacggtggctgttggtgtcatcaaggcc
gtcgagaagaaggctgcaacaactgggaaagtcacaaagtccgcccagaaggccaccggc
aaagcgaaatga
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