Petromyzon marinus (sea lamprey): 116946662
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Entry
116946662 CDS
T09614
Name
(RefSeq) dynamin-binding protein-like isoform X1
KO
K20705
dynamin-binding protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116946662
Membrane trafficking [BR:
pmrn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116946662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
RhoGEF
BAR
Motif
Other DBs
NCBI-GeneID:
116946662
NCBI-ProteinID:
XP_032817720
UniProt:
A0AAJ7TH16
LinkDB
All DBs
Position
27:12168764..12210156
Genome browser
AA seq
1678 aa
AA seq
DB search
MEAGSLLRAMFEFRPSVPEELTLFVGDVVLLLDTLDEFWLLGKKDGVTGQFPSSFVEPVP
IPKLQAKERLYVCTESFNPLTADSLEIKRGDVLVIEETLDTNWFRGRRENHRGLIAASCV
TELRLPAKPSRGGYPGADSDADLVLPANALGRARAIMGLAAQMEGELDFREGDIITITGI
PEEGWYDGEIDGRRGTFPEGFVELLKPLKKMNVKDHCQDEEILDSDQSTLCGSEYGPHSQ
HNVDANEMYAVALYDFKAIEAGELDFRKGERITIIQELEDDWLEGEVRDCRGIFPIRFVK
LEAKGSPVSDLVQTMESDPNLNRSKKENTSFKQSKSFDVYQKELPSNLLENNEDLSCNSS
NIEISVVSQQPDVLESSFSMSSTSETPKENTGLRFPSSPVRRYDVHPEVGENKDTDVGKS
VKIDYTVPIRSEQETSKRSHNRESVHQDLLQWVATQKRHAKDRSESFEAFHVNEISSSST
ECTVHNGGLSSNSKPKPDSLNHKSGVGLSGCTSTDLESKLTEQVVKFNQSLSTKRSDVSL
EAHDLQGPLQQQLNNEQGQSRPPIPPRPDVTQQPQPPPRAHRTPPPPPTNRRASAPLKVP
PPLRANMTVWQSAEDREGGGKLMPTRPAPVPPGQAGTTLETGTILSRAASVCGDRAWDGA
PVSAPVPPYRRNHSSGDLSADLAHVRQRLQPGGPLSTGAITRPASAQLQTHDLIDLGRED
ELLDFGGSHGSQDSNLDIAADNMTLLSGPSAPMNGGAAHVGGPPNGAAPEARALQGPQPG
RALEKRKMVLEELLRTERDYLADLQFCREEIYIPLRKTQVANLDVEGLFGNLEAVLEVNA
RFYESLQSAVHIARPDDQKIGEIFLAFKSELEEVYKVYCRNHDDAISLLEASEKDEDIKA
QMAVCLKNMRERSNYINLGALLIKPVQRVMRYPLLLTELLGATPPSHPDQPSLSKALVAL
RQLNHNINEFKRRKDLVVKYRKDDDSSLIDKLSKLNMHSILKKSSRVSGHLKHLTGMASQ
IRDEAFEEEERGFRGLERAVKSFLRSLSLYTQQLREALAAELQCSSSFSALHAKPDADRY
QHTCRHIATESFPQFKDRVDRLVISPLSALLASFAGPHKLVQKRYDKLLDYSARREASER
NRDRPESEELQATQKDYVALNAQLLEELPLLRAGGQALLGAAARNLVAVHRDLVLAILQQ
LQPLDVQAEQQGAFGARHVHALTELQRFSFMCDQPDSLRRGLDGRRSMDRRAASRLSGIL
ATSGSTQTDSGRSQLLARFPPDRLFVLDRKVNVAQDLDLALSEGELVAVIKQQDPMGSHR
RWFVSNGVAQGFVYSSFLRPYSPRTSQSATSVSSQSSAESVPARSPHSSPILTRQNSSSS
TQSSGSSAWSGQPPEHASPLLSRQNSDTSCQLSVGTARMSATFLKKPQSHVASGDQTADS
TSLQRNGSGRGSIRNQGGTSHQAASTDCATSRTVERLVSLEEDRTMSQPPHFADTMVTLD
SQCEGTPPRQGPCRHGGGQGSSSHGGPRPSGESSWATVDQDATLQARRKSVSGWSERQTS
LDVTRIGHGAGAEEATIPIRSQSLQDERWDCSTHKEGQQAARHAPRTKPGVRRKGKDVYY
AVYAFEARGAEEMSLRTRQRVRIVQFRDAAGNQDWWLVESEGRQGYVPATYIAKMEYT
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggcagcctgctacgcgcgatgttcgaattccggcccagtgtgccggaggag
ctgacactgttcgtgggagatgtggtgctgctgttggacacactcgacgagttctggcta
ttgggcaagaaggatggggtcacagggcaattcccatccagctttgtggagcccgttccc
atcccaaagctgcaagcaaaagagaggctttacgtttgcacagaaagcttcaacccttta
acagctgacagcctggagatcaagaggggagatgtgctggttatcgaggaaacacttgac
acaaactggttccgaggacgccgggagaaccaccgtggcctcatcgccgcatcatgcgtc
acggagctcaggttgccggctaagccaagtcggggtggttacccgggcgccgacagtgac
gccgacttggtgttgcctgcgaatgcacttggccgagcgcgggctataatggggctggcg
gcacagatggagggcgagctcgactttcgggaaggcgacatcattacgataaccggcatc
ccggaggagggttggtatgatggggagattgatggtagacgtggcacgttcccagaaggc
tttgttgaactcctcaaaccactgaagaagatgaatgtgaaagaccattgtcaagatgag
gagatcttggattctgaccaaagcactttatgtggaagtgaatatggacctcacagccaa
cacaacgttgatgcaaatgaaatgtatgctgttgcactttatgattttaaagccatcgag
gctggtgagttggacttcagaaagggtgaacgaataacaatcattcaggaactggaagat
gactggctggaaggtgaagttcgggactgcagaggcattttcccaattcggtttgtaaaa
ctggaagctaaagggtcacctgtttctgacctcgtacagacaatggagagtgatcccaat
ttaaaccgtagtaaaaaagaaaatacgagctttaaacaatcaaagagttttgatgtatac
caaaaggaattgccaagtaatttgcttgaaaataatgaagatttatcgtgtaactcttca
aatattgagatctctgttgttagccaacagccagatgttttggaatcatctttcagtatg
tccagcacgtctgagacaccaaaagaaaacacaggattgcgctttccatcttccccagtc
cgacgctacgatgtgcaccctgaggtaggagagaacaaggatacagatgttgggaaatca
gtgaagatcgactataccgtcccaatcaggtcagagcaagagacatccaaaaggtctcat
aacagagaatctgtacaccaagacctgttgcagtgggtggcgacacaaaagagacatgcc
aaagacagaagcgagagttttgaagcttttcacgtcaacgaaatttcaagcagcagcact
gaatgtactgtgcataatggtggcttgtcctcaaacagtaaaccaaagccagattcgctg
aatcataagagtggtgttggattgtctggctgcacctccacagatctcgagagcaagtta
actgagcaagtagtgaaatttaatcagagtctctcaacgaagagatcagatgtgagcttg
gaagcgcatgacctacaaggtcccctgcagcagcagctgaataacgaacaaggacagagc
cgccctcccattcctcctcgccccgacgttactcagcagccccagccaccaccacgagcg
caccgcacgccaccgcccccgcctaccaaccgacgggcgtctgcccctctgaaagtaccg
ccaccccttcgtgccaacatgacagtctggcagagcgccgaggacagagaaggtggtgga
aagctgatgcccacgagacccgcgcccgtgcctcctggacaggcgggaaccaccctggaa
acgggcactattctgagcagagcagcctcggtgtgtggcgacagggcatgggatggagct
cccgtgtctgctccggtgcctccctatcgccgtaaccactccagtggggatctgtctgca
gatctggctcatgtcaggcagagattgcaaccaggtggtccgttgtcaacaggtgcaatc
acaagaccggcatcggcccagctgcagactcacgacttgatagatcttgggagggaagat
gagctgctggattttggtggcagccatggaagccaggacagcaaccttgacattgccgca
gataacatgacgctgctgagtgggccttctgctccgatgaacgggggcgccgcccacgtg
ggcgggccaccgaacggcgccgcccccgaggccagggcgctacagggccctcagccgggc
cgagcgctggagaagcgcaagatggttctggaggagctgctgcgaaccgagagggactac
ttggccgacctacagttctgcagggaggagatctacatcccgctcaggaaaacacaggtg
gccaatctggatgtggaggggctgtttgggaacctggaggcagtgctagaagtgaacgcc
cgcttctacgagtcgctgcagtcagccgtccacatcgcccgccccgacgaccagaagatc
ggcgagatcttcctcgccttcaaaagcgagcttgaggaggtgtacaaggtgtactgccgc
aaccacgatgacgcgatctcgctcctggaggccagcgagaaggatgaggacatcaaggca
cagatggcagtgtgtctcaaaaatatgagggaaaggtccaactacattaacctgggggcc
ctgctcatcaagccagtgcagagggtgatgcgctacccgctgctgctgacggagctcctg
ggagccacgccaccgtctcaccctgatcagccgtcgctgagcaaagcgctcgtcgccttg
cgacagctcaaccacaacatcaacgagttcaaacgccggaaggacctggtggtcaagtac
agaaaagatgatgattcttcactgattgacaagctctccaaactgaacatgcattccatt
ctgaagaagtcgagccgcgtcagtggccacctcaagcatctgacaggcatggcctcccag
atccgggacgaggcatttgaggaggaggagcgaggcttccgtggcctcgagcgcgctgtc
aagtccttcctgcgcagcctttctctctacacccagcagctgcgggaagctctggctgcc
gagcttcagtgctcctccagcttctcggcacttcacgccaaacccgacgccgatcgctac
caacacacgtgccggcacatcgccaccgagtccttccctcagtttaaggatcgcgtggac
cggctggtgatctcccctctgtccgccctgctggcctcctttgcggggccgcacaagctc
gtgcagaagcgttacgacaagctgctggactacagcgcacgccgcgaagcaagcgagcgc
aaccgggaccggcccgagtcggaggagctgcaggccacccagaaggactacgttgccctc
aatgcccagctgttggaggagctgcccttgctgagagcaggagggcaggctctgctagga
gctgcagcgcgcaacctcgtggcggtgcaccgcgacctcgtcctcgccatcctccagcag
ctgcagccccttgacgtacaggcggagcagcagggtgcgtttggtgcgcggcacgtgcac
gcactcactgagctgcagcgcttcagcttcatgtgcgaccagccagacagtttgcgccgt
gggcttgacggacggcgcagcatggaccggcgcgctgcctccaggctctccggcatcctg
gcaacgagcggcagcacgcagacagactcgggccgctcgcagctgctggcgcgcttcccg
cccgatcgcctctttgttctcgatcgcaaagtgaacgtggcgcaggatctggacctggcg
ctgagcgaaggcgagctcgtcgccgtcatcaagcagcaggatcccatgggcagccatcgc
cgctggttcgtcagcaacggggtggcacaagggtttgtgtacagctccttcctgcggccc
tacagcccacgcaccagccaatcggctacctctgtgagcagccaatcttcggccgagtct
gtgccagcgcgatccccacactcctcgcccatccttaccaggcagaacagcagctcttcc
acccagagtagcggctcctcggcgtggagtggccagcccccggagcacgcctcgccgctc
ctaagccgacagaacagcgacacctcctgccagctgagcgtcggcacagctcgcatgagc
gcaaccttcctcaaaaaacctcagagccacgtagcgagtggcgatcagactgcagacagc
acgtcgctgcagaggaatggcagtggccgaggcagcattagaaaccaaggcggcacgagc
catcaagctgcaagcacggactgcgctaccagtcgcacggtggagcggctggtctccctg
gaagaagatcgtacgatgtcccagccgccccattttgccgacaccatggtcacactggac
agccaatgtgagggcacaccccctcgccagggcccgtgcagacatggaggcggccagggc
agcagctcgcacggggggcccaggccaagtggggagagcagctgggcgaccgtcgaccag
gacgctacgctgcaagccaggaggaagtccgtgtccggctggtctgagcggcagacgtcg
ctggacgtgacgaggatagggcacggcgccggtgcggaggaggcgacaattcccatccgt
tcccagagtctgcaggacgaacggtgggactgctccacccacaaggaaggccaacaggct
gctcgccacgcacccaggactaaacctggtgtgaggaggaaaggaaaagatgtctattac
gccgtgtacgcgttcgaagcgcgcggagcggaagagatgtctctgcgaaccaggcagcga
gtgcgcatcgtgcagttccgtgacgccgctgggaaccaggactggtggctggtggagagc
gagggccggcagggttacgtaccggccacctacatcgccaagatggaatacacgtga
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integrated database retrieval system
