Petromyzon marinus (sea lamprey): 116946681
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Entry
116946681 CDS
T09614
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116946681 (SMC6)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
116946681 (SMC6)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
PP-binding_2
AAA_21
Motif
Other DBs
NCBI-GeneID:
116946681
NCBI-ProteinID:
XP_032817775
UniProt:
A0AAJ7X1N4
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Position
27:12900679..12934905
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AA seq
1105 aa
AA seq
DB search
MSQKRKTSSDRRDAARKVRRVLEEDEEDDEERVVSHGKSAEPRGPSHNETQVKPDCGVIE
ALTLKNFMCHSLLGPFKFGPNLNFVTGNNGSGKSAVLTALIVGLGGKALLTSRGSSVKTF
IKHGQSSADISITLRNVGDDPYKHDQYGDSIIIDNHISCDGQRYKLKSKSGRIVSTKKEE
LTTILDHFNIQVDNPVSILNQEMSKQFLHSKDEHDKYKFFMKATHLEQMQNDYQQIMETK
KITEEKLCRQEGSLRDLSKVVREKQKKFQRIANMQDLERYIMELQNQLAWAEVRDKEVTL
KTLQDQLRMEENRTVKFDQNVEEHQKKLQAAELKYKSFEDQLNQLKNDLELFMEQNVEGK
RNLDAKKSAVKTQKALVDSLQNQLRVIEKDCDKLAKHIDELKNSTEQQLTEAERAERARR
VLSLKEELTDLKAQDDTLIQQIEHFKQAINKQKEDSYKLRREYQDQKRSVDAAEKRLQQL
AASRTENLSRFNTKFPELLQKIENAYQAGKFHQKPIGPIGAFIKARDPELALALESCLKG
LLLAFCCGHSSDVVILEKLMQGLFQGWRPQIICVKFQNQLHDTRARAVRHPIYSSVLESL
EIEKPFVANILIDHRGIESILLIKENATARQVMQSDVPPKNCREAFTKNGDQVFADRYYS
CAFFNPKYLHEDIEKEVRQLQTEKANRQVQLQKASESIKFNQEENCKNETQLTNKVQQQM
IIQGNINKLSVQIVQIENMEEPPPLDISVLEEEMREYSERKESVDASLKEALVRNQEATS
ELQVANSAYKDIRDKMDAMREKAGPIKHNLTPASNDVEEHSHNLSHYEAKRREHLRKIAE
KKTELDKVEHTITEAVEMAQRICPQRVEVTKTTKAIILELKTKQDRVNQELDVIEDTEAV
TREYHDAVKKYENSKKQLKTIRYFVNVLDKIMDERQHNYSQFMRYISCRCKYNFDMMLAK
LMYQGKITFDHGKKTLQIAVQTSRGDGDKATGDVRLLSGGERSFSTVCFLLSLWNAMESP
FRCLDEFDVFMDMVNRRVSMDMMLKLAKTQQYRQFIFLTPQNMNSLPVNRLVKILKLDDP
MRGQTTLPFRAVHQASDEESTDDES
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaaacggaagacgagcagcgaccgtcgagatgcggccagaaaggtccgccgt
gtgctggaggaagacgaagaagacgacgaagagcgggtggtcagccacggaaagtcagcc
gagccacgtggaccctcccacaatgagacgcaggtgaagccagactgcggtgtcattgaa
gcattaacgcttaagaacttcatgtgccattcattgcttggtccattcaaatttggaccc
aatttaaattttgtcaccggtaataatggcagtggtaagagtgctgtactcacagcactt
atcgtggggctgggaggcaaagcgctcctcacaagcagaggttcctccgttaaaaccttc
ataaagcacggacagagttctgcagacatctccataacactgcggaatgttggggacgac
ccgtataagcatgaccagtatggagactccatcatcattgacaatcacataagttgtgac
ggacagcggtacaaactgaagagcaaatctggaagaattgtgagcacaaaaaaagaagaa
cttaccactattttggatcatttcaatattcaggtggataatcctgtttccatactcaac
caagaaatgagcaagcaatttcttcattcaaaggatgaacatgataagtacaagtttttt
atgaaggccactcatttggagcagatgcaaaatgactatcagcagatcatggaaacgaag
aaaatcaccgaagaaaaactgtgtcggcaggaaggcagcttacgtgacctatcaaaggtg
gtcagggagaagcagaagaaatttcagagaattgccaacatgcaggatctcgagcgttac
atcatggaactacagaatcaacttgcctgggctgaggttcgggacaaagaggttaccctg
aagactctgcaggatcagctgaggatggaggagaatcgaaccgtaaaatttgaccagaat
gtggaagaacaccagaaaaagcttcaagcagccgagttgaagtacaaaagctttgaagat
cagctaaatcagctgaaaaacgatcttgaactgttcatggagcagaatgtggaaggcaaa
cgcaacctggatgcaaagaagagcgctgtgaaaacacagaaggcattggtggactcttta
cagaaccagctaagggttattgaaaaggattgtgacaaactggccaagcacatcgatgag
ctcaaaaacagtacggagcagcagttgacggaagcggagcgagcggaaagggcccggaga
gtgctatcactcaaggaggagctgacagacttaaaggcccaggatgacacgctgatccag
caaatcgagcactttaagcaggccatcaacaagcagaaggaggactcctacaagctccga
cgagagtaccaggaccaaaagcgtagcgttgacgctgcagaaaagcggctgcagcagctg
gccgccagtcgcacagagaacctcagtcgcttcaacacgaagttcccagagttgctacaa
aagatcgagaatgcatatcaggctgggaagttccatcaaaaacccattggccccatcggt
gcgtttattaaggctcgagacccggagctggcactggccttggagagctgcctcaagggg
ttactgttggccttctgctgcggtcactcatctgacgtggtcattttggagaagctcatg
caaggcctcttccagggttggcgaccacaaatcatctgcgtgaaattccaaaaccagcta
catgacaccagagccagggctgtgaggcatcccatatactcttctgtgttggagagcctg
gaaatagagaaaccattcgtggcaaacatcttgatagaccatcgtggaatcgagtccatt
ctactcataaaggaaaacgccaccgcccgccaagtgatgcaaagtgatgtgccacccaag
aattgcagggaagccttcaccaagaacggtgaccaggtgttcgccgaccgatactactcg
tgtgctttttttaatccaaaatacctccacgaagacattgaaaaggaggtcaggcagctt
cagactgagaaagcgaacagacaagtgcagctccaaaaagcatcagagagtataaagttc
aaccaggaagagaactgcaaaaatgagacgcagctgaccaataaagttcaacaacaaatg
ataattcagggaaatataaataaactcagtgtgcagatcgtgcaaatagaaaacatggaa
gagcctcctcccttggatatcagtgtcttggaggaggagatgcgggagtattctgagcgc
aaggagagcgtggacgcatcgctgaaagaggctttggttcggaaccaggaggccacctcc
gagctgcaggtcgcgaacagtgcctacaaagacatcagagacaaaatggatgcaatgagg
gaaaaggctggacccataaagcataatttgactccagccagcaatgacgttgaagaacac
agtcacaacctaagtcactatgaggccaaacgcagggagcacctgaggaagattgcagaa
aagaagacagagctggacaaagttgagcataccatcactgaggccgtggagatggcacag
aggatttgcccgcaacgtgtggaagtgacgaaaaccacaaaagccatcatcctggagttg
aagaccaagcaggacagggttaatcaggagctggatgtgattgaagacactgaggccgtc
actcgagagtaccacgatgctgttaaaaaatatgaaaattccaaaaagcagttaaagaca
attaggtattttgttaatgtcttagataaaattatggatgagagacaacataactacagt
cagttcatgagatatatttcgtgccggtgtaagtacaactttgacatgatgctcgccaag
ttgatgtaccaggggaagataacgttcgaccatgggaaaaagacgttgcaaatcgcggtg
caaacgtcgcgaggcgacggagacaaagctacaggcgacgtgcgcttgctgtccggcgga
gagaggtccttctctaccgtgtgcttcctcctctcgctctggaatgccatggagtcaccc
tttcgctgcctcgacgagttcgacgtgtttatggacatggtgaacaggcgcgtatccatg
gacatgatgctgaaactcgccaaaacccagcagtaccgccagttcatcttcctcaccccg
cagaacatgaacagcctaccagtgaaccggctggtaaagatcctcaagctggacgacccc
atgcggggccagacaaccctgccattcagagctgtgcatcaggcgagtgacgaagagagc
acagatgacgagagctga
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