Petromyzon marinus (sea lamprey): 116946861
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Entry
116946861 CDS
T09614
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116946861 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116946861 (DHX36)
03012 Translation factors [BR:
pmrn03012
]
116946861 (DHX36)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116946861 (DHX36)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116946861 (DHX36)
Translation factors [BR:
pmrn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116946861 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
AAA_23
Cas3-like_C_2
NACHT
Motif
Other DBs
NCBI-GeneID:
116946861
NCBI-ProteinID:
XP_032817973
UniProt:
A0AAJ7X2T9
LinkDB
All DBs
Position
28:1602974..1634574
Genome browser
AA seq
1014 aa
AA seq
DB search
MATRGGRFSRGRARDRCYDGSDFASMDEAGGGGGGGGGGGFGPPRGGRGRHPSHLKGRDI
GLWYSRKSIGKGRARDRRDRAVVEMDGAREQHITQLLHAVKKEDREEACRDLDAAQAPGT
SWRVQPMDGGASLKPLAKVETPDWWDQSDGEEEGDRGQVPPPNEIEEVDEMVGQPLERDH
ELDERLRQELHKNREGNREFLKMQEFREKLPAYKMKRDLLALINNHHVVVISGETGCGKT
TQVPQFILDDQIERGKGSACRIVCTQPRRISAISVAERVAVERAESCGNGNSTGYQIRLQ
SRFPRKQGSVLYATTGIVLQWLQTDRLLRGTSHLVLDEVHERSLQSDFLLTIVRDVLPHR
PDLSIIVMSATLNAQMFSRYFGGCPIIHIPGFTFPVQEYLLEDVLEMTRYCPLQRPQQRS
RRNLFMHGRQRRQAEQEMQQEYEQRWPEYLDSLHGKYSMSTVQALEMIDDELIDADLIAA
LIRHIVLHAEDGAILVFLPGWADISKLHTTLTADQMFSAEHFIIIPLHSLMPTISQTKVF
ERPPPGVRKIVIATNIAETSITIDDVVHVIDCGKIKETHFDVDNNISTMKPEWVSLANAK
QRRGRAGRVQAGFCYHLYNGLRANMLSDYQLPEMLRTPLEELCLQIKILKLGRIEDFIKR
TMQPPTEQAVLLAITNLIGLNALSRAEELTALGFHLARLPVEPHIGKLILFGAMFSCLDP
VLGIAACLGFKDPFVIPLGKEKLADAKRRELSQNCKSDHLTIVYALQRWEQGRRGHGRSV
NDFCWEYFLSQNTLQMLHNMKDQFAEHLQAAGFVDNSNPRDPKANLHSGNEKLVKAVICA
GLYPKVAKIRPSFSKKRRGVKVYTKPDGKVSIHPKSVNAEESDFRHQWLVYHLKLKTTNI
FLYDCTEVSPYSLLFFGGEISMQRDQDQDTISVDEWIVFRSPFRIASLVKDLRKQLDSLL
EQKITRPSPVEWQRESSESALLKAIIDLITTEEGGGGGGGGSGGGFGGPSHRAY
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcgtggaggtcgcttctctcggggcagggcccgagaccgctgctacgatggc
tcggattttgcgagcatggacgaggcgggaggaggaggaggaggcggcggtgggggaggc
ttcgggccgccgcggggaggccgaggtcgccatcccagccacctcaagggccgagatatc
ggcctctggtattcccgcaagtccatcggcaagggcagagcgcgggaccggcgagaccgc
gctgtggtggagatggacggagcccgagagcagcacatcactcagctgctacatgccgtc
aagaaggaggacagggaggaggcttgcagagatctggatgccgcccaggctcctggcacc
agctggagggtgcagccaatggacggtggtgccagtttgaagccgctcgccaaggtggag
acccctgactggtgggaccagtcagatggggaggaggagggtgatagaggacaggtccct
ccgcccaatgaaatagaagaggtggatgagatggttgggcaaccgttggagcgcgatcac
gaactcgatgaaagattgcgccaggagttgcacaagaatcgggaaggcaaccgggaattt
ttaaagatgcaggagttccgagagaagttgcctgcttacaaaatgaaacgggacctgctg
gcgttgatcaacaatcaccacgtggtggtcatcagcggggagacgggctgcggcaagacg
acgcaggttccccagttcatcctcgacgaccagatcgagcgcggcaagggctcggcatgc
aggatcgtgtgcacgcagccgcgccgcatcagcgccatctcggtggcggagcgggtggcg
gtggagcgagcagagagctgtggcaatgggaacagcacgggctaccaaatcagattacag
agccggtttccaaggaagcaaggctcggtcctttacgccacaacagggatcgtgttgcag
tggctacaaacagaccggctgctccgcggcacgagccacctggtgctggacgaggtgcac
gagcggagcctgcagtccgacttcctgctcaccatcgtgcgcgacgtcctgccccaccgg
cccgacctcagcatcatcgtcatgagcgctacgctcaacgcgcagatgttttcgcgatac
tttggtggttgtcccatcatccacatacccgggttcactttcccagtgcaggagtacctc
ttggaagatgtgctcgaaatgaccaggtactgcccactgcagcgtccgcagcagaggtcg
cgccggaacctgttcatgcacgggcggcagcggcggcaggccgagcaggagatgcagcag
gagtacgagcagcgctggcccgaatacctcgactcgctgcacgggaagtattccatgagc
accgtccaagcactggagatgatcgacgatgagctcatcgacgcggacctcatcgcggcg
ctcatccgccacatcgtgctgcacgcggaggacggagccatcctggtgtttttgcctggc
tgggctgacatcagcaagctgcatacaactctcaccgcagaccagatgtttagtgcagaa
catttcatcatcatccctctgcactccctcatgcctacaatcagccaaacgaaggtgttt
gagaggcctccgcctggcgtacgcaagattgtcatcgccacgaacatcgcagagaccagc
atcacgatcgacgatgtggtgcacgtcatcgactgcggcaagatcaaggagacgcacttt
gacgtcgacaacaacatctccaccatgaagcccgagtgggtgagcctggccaacgccaag
cagaggcggggacgtgctggccgagttcaagccggattctgctatcacttgtacaatggg
ctgcgagctaatatgctgtccgactaccagctgcccgagatgctccgcacaccactggaa
gaactctgcttgcagattaagattttgaagctgggtaggatcgaggatttcatcaagcgg
acgatgcaaccccctacagagcaagccgtgctgctggccatcaccaacctcatcggcctg
aatgcgttgagccgcgcggaagagctcaccgcgctgggattccacctggcgcggctgccc
gtggagccgcacatcggaaagctcatcctcttcggggccatgttcagctgcctggacccg
gtgctgggcatcgccgcctgcctcggattcaaggatccctttgtcatccctttgggaaag
gagaagctcgcggacgccaaacggcgggaactctcccaaaactgcaagagcgaccacttg
accattgtgtacgccctgcagcgctgggagcagggacggcggggtcatggccggtcggtg
aacgacttctgctgggagtacttcctctcccagaacacactgcagatgttgcacaacatg
aaggaccagtttgcggagcacctacaggcggccggctttgtggacaacagcaatccccgc
gaccccaaggccaacctgcactcgggcaacgagaagctggtgaaggcggtcatctgcgca
ggcctttaccctaaggtggccaagatccggcccagcttcagtaagaagaggagaggggtg
aaggtgtacacgaagcccgacggcaaggtctccatccaccccaagtcggtgaatgccgag
gagtcggacttccggcaccagtggctcgtctaccacctcaagctcaagaccaccaacatc
ttcttgtacgactgcacggaggtgtcgccctactcgctgctcttcttcggcggagagatc
agcatgcagcgcgaccaggaccaagacaccatctcggtggacgagtggatcgtgttccgc
tcgcccttccgcatcgcctccctcgtcaaggacttgagaaaacagctggactcgctgctg
gagcagaagatcacgcggccgagccccgtggagtggcaacgcgaatcgtccgaatcggcg
ctcctcaaggccatcatcgacctcatcaccacggaggagggcggtggtgggggtgggggc
gggagtggaggagggttcgggggcccgtcccatcgcgcctactag
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