KEGG   Petromyzon marinus (sea lamprey): 116946865
Entry
116946865         CDS       T09614                                 
Name
(RefSeq) Y-box-binding protein 1-like
  KO
K06099  cold shock domain protein A
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    116946865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmrn03000]
    116946865
   03041 Spliceosome [BR:pmrn03041]
    116946865
Transcription factors [BR:pmrn03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    116946865
Spliceosome [BR:pmrn03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    116946865
SSDB
Motif
Pfam: CSD OB_RNB S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 116946865
NCBI-ProteinID: XP_032817983
UniProt: A0AAJ7TJY7
LinkDB
Position
28:1783828..1792213
AA seq 331 aa
MSEAAAQPEKPRPAVAEKKIIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKN
NPRKYLRSVGDGEVVEFDVVEGEKGAEAANVTGPGGTAVQGSRYAADRRRFRGGYYAGPR
RGRGGARNGGEGGDGAEEALEEEDDQAGYQTQTRRPAYRGRRYPPYYGGEAGEGEEGAGD
AGVDGTAPPRRPGGRGFTRPYRSRRGPVRPRAGPPGEGGAEDKENEAGEERPFRAQQQQN
FRRPYYSRGRGRGARRGGGAAAGEGGKAAAGSGGEASGAAATTTTTSGSGTAASATTTTT
ATSAGGEATAAAAPPSPAVAAAPSEPPAAAE
NT seq 996 nt   +upstreamnt  +downstreamnt
atgagcgaggccgcggcgcagcccgagaagccccggccggcggtcgccgagaagaaaatc
atcgccaccaaagttctcggcaccgtcaagtggttcaacgtcagaaacggatacggcttc
atcaaccggaacgacaccaaggaagatgtctttgtccaccagactgccatcaagaagaac
aacccaaggaaataccttcggagcgtgggggacggagaggtggtggagtttgacgttgtg
gagggagagaagggtgccgaggcggccaatgtgaccgggccgggtggaacggcggtgcag
ggcagccgctacgcggccgatcgccggcgcttccgcgggggttactacgccgggcctcgc
cggggccggggaggggcgcgcaatggtggcgagggcggcgatggagccgaggaggcgttg
gaggaggaggacgaccaggccgggtaccagacacagacgcgacgtcccgcctaccgcggc
cgtcgctacccgccctactacggcggcgaggctggcgagggcgaggaaggcgccggtgac
gccggagtggacggcacggctccaccacgccgcccaggcggccgcggtttcactcgcccc
taccgcagtaggcgcgggcccgtgcggccccgcgccggcccccccggggagggtggcgcc
gaggacaaggagaacgaggccggagaggagaggccgttccgtgcccagcagcagcagaac
ttccgccggccgtactacagccggggtcgaggccggggggcgcggcgcggaggaggtgcc
gccgccggagagggcggcaaggccgcggccggcagcggaggggaggcgagcggcgccgca
gccaccaccaccaccaccagcggcagtggcaccgcggcctccgccacgaccaccacgacc
gccacgtccgcagggggagaggccaccgccgccgcagcgccaccatccccagcggtggcg
gcggcgccgtccgagccgcctgctgctgctgaatga

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