Petromyzon marinus (sea lamprey): 116946869
Help
Entry
116946869 CDS
T09614
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116946869
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116946869
Membrane trafficking [BR:
pmrn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116946869
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116946869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
RhoGEF
PH_19
Beta-prop_LRRK2
PQQ_3
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
116946869
NCBI-ProteinID:
XP_032817987
UniProt:
A0AAJ7X1V2
LinkDB
All DBs
Position
28:1930886..1966005
Genome browser
AA seq
1276 aa
AA seq
DB search
MEEDCEGDVAPPKPPPADYPAHPSPPTDSAPPPPPPPDYGAGPRGSPTADPTKTPATAQT
GDPTQEDADDEEEEEEEGEMFDFEEGDNVETRTPHPALTTTAALATATTAALTATATTAT
LTTTTPTTTTLTPPTTLTPTNALSPTGPQPPTTPLETAGGVPGGGDPTPPLRDDSVRLPV
ERERSGYGEDVSETQGPARDDLHEVIYDDVPIEAQSPTLSGVDRIYDAVCPEGRGGGGGG
GGGGGGSGSEGWSSSEFESYSDEDGAEGEGRPPRTGGALALPANLRRSRRPVQELMRAAR
DGTKDGLEKLEKTKAAVLKRGRFFMQRTSLISQSQGRPAASDEDDVQLDVKMETLTLGPA
PPGLSQQQLKRRYILGSIVESERSYVQTLKDIHTRYELPLLEGESRLLSERKVRAVFSGV
RDLLQCHCMFHIALGSRVAQWELTDSIGDVFVASFSRSMVQDVYSEYVSNFSTAMEIVRK
ASATRPAFLEFIKGCQETSADRHSLQALMMKPVQRFPQFILLLQDMLRNTPRGHPDRLPL
QMALTELETLAGRLNERQRFAGRRNELRAVASAIHDRQLAKLLGTGERYLVRVDDVTESV
VGERRLILKTRPRRLFMLNDTIVCAGLNPRIPYDGNGMVPAGPRFTLKWSVPLRQVQVSG
GECDEEGGADKGAPPPQLSVDPKGSHLYSGPARLYVELQELHSDFQLMTQISQLTGQLHG
AYATMTPALVQECAASVQRLIQQKEAQIRGSDRCRVQLQLQGKPDKHGRPVSFVSVFHFS
SPGARASWLRDLKTATLSLEDANQWGWFSAEDEDRPQAPHRCPLLLSHMPVFEAGTQDLR
PECAVYNPVPSSSVGEGWRHQLSLGQGTIWIGSGDASMGQLSVLSLGNAEPRVTEGFSVE
ARVLCAEFVPAPPDPPTPGGSPPDPSTWLALDDGSVCAYRSSPACKKVRLWREPTPGGSP
ASSLRYAHGHVYAGLRDGTLAVYMRGADAAWAVHATFSLGSLPVPALLPVGEALWAACGN
HIAVRTAGGEAATPQAGFEAHPEAEVHVCQVALAGVGVWVSFSRGTSLRLFHTETLEQLQ
DVNIATPVNRMAPGGAAQRPLVVTCLASCPGLLWVGTSLGLIVALPLPRLEGLPKLTGRG
MVAYHAHSGAVTFLAVAMGTSAAEAGAEAAGTPSAAAPPGFEVHHPPDSPLPCGPESPFA
LDEGTALGPEGAGGGEGAERGGDVGGGRRGARAAGVSTALVVSGGLGYRSLPRPGGKAPQ
GPPHSQHSLMLWYYPV
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggattgcgagggcgacgtggccccccctaagcccccgcccgccgactacccc
gcccacccgtccccaccgacagactcggccccccccccgcctccgccccccgattatggc
gccggtccccgtgggtccccgactgcggaccccacaaagacccccgccactgcccagaca
ggtgaccccacacaagaagatgccgatgatgaggaggaggaagaggaggagggagagatg
tttgattttgaagagggcgataacgtggaaactcgcacaccgcaccccgcactcaccacc
accgccgcactcgccactgccaccaccgccgcactcaccgccaccgccaccaccgccaca
ctcaccactaccacacccaccaccaccacactcacccccccaaccacgctcaccccaacc
aatgcactctcgcccactggcccccagccccccacgacccccttggagacggcggggggg
gtcccgggcggtggggacccgaccccccccctgcgggacgactcggtgcgcctccccgtg
gagagagagcggtctggctatggtgaggatgtgagcgagactcagggtcccgcgagagat
gaccttcatgaagtcatctatgacgacgttcctatagaggcacagagccccaccttatca
ggggtggaccgcatctacgacgcagtgtgcccggaggggcgcggcggcggcggcggcggc
ggcggcggcggcggcggctcgggcagcgagggctggagctccagcgagttcgagagctac
agcgacgaggacggcgccgagggggaggggcgcccaccccgcacggggggggcgctcgcc
ctccccgccaacctccgcaggtcccgccgaccggtgcaggagctgatgcgggccgcgcgg
gacggcaccaaggacggcctcgagaagctggagaagacaaaagcggccgtgctgaagcgc
ggccgcttcttcatgcagaggacctcgctcatctcccagagccaggggcgaccggcggcc
tcggacgaggacgacgtgcagctggacgtgaagatggagacgctgaccctggggcccgct
ccaccgggcctctcccagcagcagttgaagcgtcgctacatcctcggctcgattgtggag
agcgagagaagctacgtgcagacgctgaaggacatccacacgcggtacgagctgcctctg
ctggagggtgagagccggctgctgagcgagcggaaggtgcgcgccgtgttcagcggcgtg
cgcgacctcctgcagtgccactgcatgttccacatcgcactgggcagccgcgtcgcccag
tgggagctcaccgactccatcggtgacgtgttcgtcgcctcgttctcgcgctccatggtg
caggacgtgtacagcgagtacgtgagcaacttcagcacggccatggagatcgtgcgcaag
gcgagcgccacgcgccccgcgttcctcgaattcatcaagggctgccaggagactagtgct
gaccgccactccctgcaggcgctgatgatgaagccggtgcagagattcccccagttcatc
ctcctgttgcaggacatgctgcggaacaccccgcgggggcaccccgaccggctgccgctg
cagatggcgctcacggagctggagacgctcgccgggcggctcaacgagcgccagcgtttc
gcgggtcggcgcaacgagcttcgcgccgtcgccagtgccatccacgaccgccagctcgcc
aagctgctgggcaccggggagcgctacctggtgagggtggacgacgtgacggagagcgtg
gtgggcgagcgccgcctcatcctcaagactcgcccgcgacgcctcttcatgctcaacgac
accatcgtgtgtgccggcctcaaccccaggatcccctacgacgggaatgggatggtcccg
gctgggccccgcttcacactcaagtggagcgttccactgcgccaggtgcaggtgtcaggg
ggggagtgcgacgaggaagggggtgccgacaagggggcgccccccccacagctctccgtg
gaccccaaagggagtcacctgtactcgggccccgcgcgtctctacgtggagctgcaggag
ctgcacagcgacttccagctcatgacccagatctctcagctcacgggccagctgcacgga
gcctacgcgacgatgaccccagcgctggtgcaggagtgtgcggcctcggtgcagcgactc
atccagcagaaggaggcccagatccggggcagcgatcgctgccgcgtgcagctgcagctg
cagggaaaaccagacaagcatggccgccccgtgtcgttcgtctccgtcttccacttctcg
tctccgggagccagggcctcgtggctgcgagacctcaagacggcgacgctctcactcgag
gatgcgaaccaatggggttggtttagcgcagaggacgaggaccggccacaggctccacac
aggtgcccgctgctgctgtctcacatgcccgtgttcgaggccgggacgcaagacctcagg
cccgagtgcgccgtctataacccggttccctcgtcgagcgtgggggaggggtggcggcac
cagctctccctgggccagggaaccatctggatagggagtggggatgcgtcgatgggccag
ctcagcgtgctgtctcttggcaacgcggagccgcgcgtcaccgagggcttcagcgtggag
gcgcgcgtcctctgcgccgagttcgtccccgcaccccccgaccccccgacccccgggggc
tccccccccgacccctccacctggcttgccctggacgacggcagcgtgtgcgcgtaccgc
agcagcccggcgtgtaagaaggttcgtctgtggagggagccgacgcccgggggctccccc
gccagcagcttgcgctacgcgcacgggcacgtgtacgcgggactacgtgacggcacgctc
gccgtgtacatgcgcggagccgacgcggcgtgggcggttcacgcgaccttctcgctgggc
tccctcccggtccccgcgctgcttcccgtgggagaggcgctgtgggccgcgtgcggaaac
cacatcgcggtgcgcaccgcgggcggagaggcggccaccccgcaggctgggtttgaggcg
caccccgaggcggaggtgcacgtgtgccaggtggcgctggccggcgtgggcgtgtgggtc
tccttctcgcgcggcacctccctgcgcctcttccacaccgagacgctggagcagctgcag
gacgtcaacatcgccacgcccgttaaccgcatggcgcccggtggtgcggcacagcggccc
ctcgtggtcacgtgcctggccagctgcccgggcctcctgtgggtgggcacgagcctgggc
ctcatcgtcgccctgcccctcccccggctggaggggctccccaagctcacaggccgaggc
atggtggcgtaccacgcgcacagcggcgccgtcaccttcctcgccgtcgccatgggaacc
agcgccgccgaggcaggggccgaggcggcggggactccctccgccgccgcccccccaggg
ttcgaggtgcatcacccccccgactcccctctcccctgcggcccggagtcccccttcgcc
ctcgacgaggggaccgccctgggacccgagggggcgggcggcggcgagggggcggagagg
gggggggacgttggtggggggcgacggggggcccgggcggcgggggtctccacggccctg
gtggtgtcggggggactgggctaccgctccctgccgagaccggggggcaaggccccccag
ggcccccctcactcccagcacagcctcatgctgtggtactaccccgtgtga
DBGET
integrated database retrieval system
