Petromyzon marinus (sea lamprey): 116946941
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Entry
116946941 CDS
T09614
Symbol
HES1
Name
(RefSeq) transcription factor HES-1
KO
K06054
hairy and enhancer of split 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03460
Fanconi anemia pathway
pmrn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116946941 (HES1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116946941 (HES1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116946941 (HES1)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116946941 (HES1)
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
116946941 (HES1)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
116946941 (HES1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_IRO3
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
116946941
NCBI-ProteinID:
XP_032818117
UniProt:
A0AAJ7TKB4
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All DBs
Position
28:5091321..5096071
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AA seq
329 aa
AA seq
DB search
MPADTMMEKVSVSPVAAVTACNSIPEKSKTASEHRKSSKPIMEKRRRARINESLGHLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALNTDPSVLGKYRAGFNECMTE
VTRFLSTCEGVNAEVRTRLLSHLANCMAQISTMSGGYPQGHHHGPAGMMPPPSHYAQALP
TGAPGGQVPVASNASGGGAGAAAAAGGGGGTGGVALPGGGGPACKGSPPALADVLLSQTT
AGPASNVGAGKVYGGFHLVPGPDGQIAFLIPNPHLIPMYAPGSSAGSPGHPGSPGKGLRH
HPYPAGCPMTASAIPINALMGADSVWRPW
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgacactatgatggagaaggtgtccgtgtcgcctgtggccgccgtgaccgcc
tgcaactccatcccagagaagtcaaagacggcgagtgagcaccgaaaatcctccaagccg
atcatggagaagaggaggagagctcgaatcaacgagagcctgggtcacctgaagacgctc
atcctggacgccttaaaaaaagacagttctcgccactccaagttggagaaggcggacatc
ctggagatgacggtcaagcacctaagaaacctgcagcgcgttcaaatgacagccgccctc
aacacggaccccagcgtcctgggcaagtacagggccggcttcaacgaatgcatgaccgag
gtgacgcgattcctgtccacgtgcgagggcgtcaacgcggaggtgcgcacccgtctgctc
agccacctggccaactgcatggcccagatctccaccatgagcggcggctacccgcaagga
caccaccacggacccgccggcatgatgccaccaccatcgcactacgctcaggcgcttcct
accggcgcaccgggtggacaggtccctgtggcttccaacgctagcggtggtggtgccggt
gctgctgctgctgctggcggcggcggcggcactggtggtgtggctctgcccggtggagga
ggtcccgcttgcaagggcagcccgccggcgttagccgacgtgctgctgtctcagaccacc
gcggggccggcctcgaacgtgggggcgggcaaggtgtacggagggttccacttggtgccg
ggacccgacggacagatcgccttcctcatcccgaaccctcacctcatccccatgtacgcg
cccggctccagcgcggggtctcccggccacccgggcagccccggaaagggactccggcac
cacccctaccccgccgggtgccccatgacggcgtcggccatccccatcaatgctctgatg
ggcgcagactctgtatggaggccttggtga
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integrated database retrieval system
