Petromyzon marinus (sea lamprey): 116947022
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Entry
116947022 CDS
T09614
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03020
RNA polymerase
pmrn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116947022 (POLR2D)
09124 Replication and repair
03420 Nucleotide excision repair
116947022 (POLR2D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116947022 (POLR2D)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116947022 (POLR2D)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
116947022 (POLR2D)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116947022 (POLR2D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
116947022
NCBI-ProteinID:
XP_032818263
UniProt:
A0AAJ7THW4
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Position
28:11159427..11164841
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AA seq
142 aa
AA seq
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MATGGVDAKQGDFEEDASQLQFAKEFENAETLLISEVHMLLEHRKQQNESAEDEQELSEL
FMKTLNYTGRFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPETAEEAKALIPSLEG
RFEDDELQQILDDIQTKRSFQY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggcggcgtggacgcgaagcagggagacttcgaggaggacgcctcgcagctg
cagttcgccaaggagtttgagaacgcggagactctgctcatctccgaggtgcacatgctg
ctggagcaccgcaagcagcagaacgagagcgccgaggatgagcaggagctgtccgagctc
ttcatgaagacgctgaactacacgggccgcttcagccgcttcaagaaccgcgagaccatc
gccagcgtgcgcagtttgctgctgcagaagaagctgcacaagtttgagctggcaagtctg
gccaacctgtgtcctgagacagccgaggaggccaaggctctcatccccagcctggagggt
cgattcgaggacgatgaactgcagcagatactggacgacattcagacgaaacggagcttc
cagtactga
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