Petromyzon marinus (sea lamprey): 116947049
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Entry
116947049 CDS
T09614
Symbol
GIGYF2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116947049 (GIGYF2)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116947049 (GIGYF2)
Surveillance factors
Other surveillance factors
116947049 (GIGYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
116947049
NCBI-ProteinID:
XP_032818317
UniProt:
A0AAJ7X263
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All DBs
Position
28:13279998..13413816
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AA seq
1354 aa
AA seq
DB search
MEMCILSSDNTEAMAAETQTLNFGPEWLRTLSSGGSVTSPPPSPALPKYKLADHRYGREE
MLALYIKEHKVPEDLMDKEFLPILNEEPLLPLALVPFTEEEQRNFSMSVNSAAVLRLMGR
GGPVVAGAPRGRGVTRGRGRGRGEPGFYQRSFDEVEGGFGRGAREINRSQSWEERGGDRR
FEKPGRRDAPVGAVVPPAPPPPTAVPSVRPVFDEASALLAKKQQHDFTRSDSENWRAMRE
EANGERWRQSSPDGPRSAGWREPGERPRRRFDFEFRERDEERGGGGGGGAYRRTRSGSGS
FDDDNLPEWCLDDEGEMGTFDSSGAFMSFKKGPKEPIPEEQELEFKGADEEDEEADDEGE
FRREDAEERQCSRDNKDGEKVLAQDDWDEASLESGKQEDRLSPTPCFSKELPTVTGNQPS
LREEGSISHKDPEKMDVPDNQTLQHGSPQDLSSSKAVSSDVLNSVGISGPGSGKRDGVVG
HDHDDDEGLKHLEQEAEKMVASLQDTSLEEDRLDTKNRASALPLTHEAAMKWFYKDPQGD
IQGPFTNQEMAEWFQAGYFTMTLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPVPPPFLND
PDHERLKRQQELAIIQMQLQYQQFLQAQLYSRDVSSMWNTGRAAHHPVLENSSRVGHHRI
TSESTRQCAQSIAQLQQKATLAPLTPQQQQHLALLIQHYQTLKQRTQEHQQGLIPAVSRS
LSVPESTGSLWELKTPTSQPAGWEGGSIWDLPPESQGPTLEQLQQLEREKGGKLLDPERC
EAELRMRDDDERKRQEEQVTRTCAVKVTTRRQQEELLQRQEEERKRREEEEAARRKQQQE
DEEQLRRQQEQEMLRRQEEKRRREEEERRQREDMIRKQEEERRHQEEEEARRRCEEDEEK
KRKEVELQRQKELQQQQRQQELELQQRQQELELQQRQQDLELQQRQKELQQRQQQEMMRQ
RQQQEALRRLQQQQLAQMKLPSSSTWGQQVPAMSSQQSSLSLAEIQKIEEEREKQLREEQ
RRQQDLIKTLQQQQQQQQQKPVGWNNVSKAGLSAKSLLEIQQEEARHVQKQQQQQRAQAQ
AQAQARAQHSSVPINNASVWGNVSPGGSSNPWGSDVSNLWGGAGAGTIQEKKSPNIGFWD
DAVKELGPPVRNVNMKTSKSSPSLGESYGIPSRQSKKKTEEEDKLMKLFQGVNKAQDGFT
QWCEQMLHALNTSNNLDVPTFVSFLKEVESPYEVHDYITAYLGETPDAKEFAKQFLERRA
KQKQNHQRQQQQLHQQQQQQESVWGLPQGGGGGSMPSAYQCGHSAAQQASFEAMQASKKK
KKQRMVRADPSILGFSVNASSDRPNMGEIETLED
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtgtattctgtcctcagataacacagaagctatggctgcggaaacccagaca
ctcaattttggaccagaatggctgcgtactttgtcaagtggtgggagtgtcacctcccct
cctccttcaccggccttacctaagtacaagctagctgaccatcggtatggccgagaagaa
atgcttgcactttacatcaaggaacacaaggttccagaggatttgatggacaaggagttt
ctgcccattcttaatgaggagcccctgctgccacttgctttggtgccgttcacagaggaa
gagcaaagaaatttctccatgtcggtgaacagtgcggcggtgctgaggctcatggggagg
ggagggcccgtggtagcaggggctccgagaggtcggggcgtcactcggggcagagggcga
gggagaggtgagccaggtttctaccaaagaagtttcgatgaagtggaaggagggtttggc
aggggagctcgagaaatcaaccgcagccagagctgggaggagcgaggtggtgacagaaga
tttgagaagccaggccgacgcgatgctcctgttggagccgtggtgccacctgcgcccccg
ccacccacagccgttccgtccgtgcgaccggtgtttgacgaagcgagtgcattactggcc
aaaaagcagcagcacgacttcacgcggtccgacagtgagaactggcgagccatgcgcgaa
gaggccaatggggagcggtggagacagagcagtccggacgggccgcgctctgccgggtgg
cgcgagccgggtgagcgtcccaggaggaggttcgactttgagttccgggagagggacgag
gagcgaggaggtggaggcggaggaggagcgtaccggcgcacgcggtctggctcgggcagt
tttgatgatgacaacctgcccgagtggtgtctggatgacgagggggagatgggcaccttc
gactcatccggagcgttcatgtccttcaagaagggcccgaaggagcccatccctgaagag
caagaactggaattcaagggcgccgacgaagaggatgaggaagcagatgatgagggggag
ttcagacgggaagatgccgaggaacgacagtgcagcagggacaacaaagatggggaaaaa
gtcttagcacaagacgactgggatgaagcatccctcgaaagtggcaaacaggaagaccga
ctgtcaccaacgccatgtttttcaaaagagctgcctactgtgactgggaaccagccctca
ttgcgggaagagggttccatttcacataaagatcctgaaaaaatggatgtgcctgacaac
cagacactgcagcatggctcaccacaagacctctcaagctcaaaggctgtcagctctgat
gtcctgaactctgtgggcatttcggggcctggctctggcaagcgagatggagtcgttggc
catgatcatgatgatgatgagggcctcaagcacttagagcaggaagctgagaagatggtg
gcatcgctgcaggacacctccctggaggaggatcgtctggacacaaagaacagggcgtct
gctcttccacttacccatgaggctgctatgaagtggttttataaggatccacagggagac
atacaaggtcccttcaccaaccaggagatggcagagtggttccaggctgggtacttcacc
atgactctgcttgtaaaacgcggctgcgacgaaggtttccagccccttggggaagttata
aagatgtgggggcgtgtgccgtttgctcctggccctgtacctccaccgttcctgaacgac
cctgaccacgaacggttgaaacgccaacaagagttggcgataattcagatgcagctgcag
tatcaacaattcctgcaagcccagctctacagcagagatgtatcatccatgtggaacact
gggagagcagcgcaccaccctgtgttagaaaacagctccagagtggggcatcacaggatt
acatctgagagcactcggcaatgtgctcagtccattgcgcagctccagcagaaggccact
ttggcaccattgaccccacagcaacagcagcacttagctcttctcatacagcactaccag
acgctcaagcagaggacccaggagcaccaacaaggcctcatccctgcagtgtcacggtcc
ctatcggtacccgaatccacaggttcactgtgggaactcaagacgcctacctcccagcct
gcaggctgggagggaggcagcatctgggatttgccacccgagtcgcagggccccactctg
gagcagttgcagcaattagaacgcgagaagggaggcaagctgctggatccagaaagatgc
gaggctgagctcaggatgagggacgatgatgagaggaagcgtcaggaagagcaagtcacc
cgaacgtgtgctgtgaaggtgacaacgcggagacaacaggaggagctcctccagaggcaa
gaggaggagagaaaacggagagaggaggaggaggctgcccgacgaaagcagcagcaggag
gatgaggagcaactgagacgccagcaggagcaggagatgctgcggagacaggaggagaag
cggcggagagaggaggaggagcgacggcaacgcgaggacatgatccgaaagcaggaggag
gagcgccggcatcaggaggaggaggaggcacggagacgctgcgaggaggatgaggagaaa
aagcgtaaggaggtggagctccagcggcagaaggagctgcagcagcagcagaggcagcag
gagttggagttgcagcagaggcagcaggagctggagctgcagcagaggcagcaagatctg
gagctgcagcagagacagaaggagctgcagcagagacagcagcaggagatgatgcggcag
agacagcagcaggaggccttaaggcggctgcagcagcagcagcttgcgcagatgaagctg
ccctcgtcgtccacgtgggggcagcaggtgccagccatgagcagccagcagtcgtcgctc
tccctcgccgaaatccaaaagatcgaggaggagcgagagaagcaactgcgggaggaacaa
cgccgacagcaagatctgatcaagacgttgcaacagcagcaacagcaacagcagcagaaa
cccgtggggtggaacaacgtgagcaaggctggcttgtcggccaagtctctgctggagatt
cagcaggaggaagcccggcatgtgcagaagcaacagcagcagcaacgggcgcaggcacag
gcccaagctcaggcacgcgcacaacattcaagcgtccccattaacaacgcttccgtgtgg
gggaacgtgagtcccggtggctcctctaacccgtggggttctgacgtgagcaatctgtgg
gggggggctggtgctggcacgatccaagaaaagaaatctcccaacattggcttctgggac
gacgctgtgaaggagctgggcccgccagtgcgcaatgtcaacatgaagaccagcaagagc
agtccttcgctcggtgagtcgtatggaattccgtcacgtcaaagcaaaaagaaaacggaa
gaagaagataagctgatgaaactattccagggagtgaacaaggcccaagacggattcact
cagtggtgcgagcaaatgctgcatgctctcaacacttccaacaacctcgatgttcctaca
tttgtgtcattcttaaaagaggtggagtctccctatgaggtacacgactacatcacagca
tacctgggagagacaccagacgccaaggagtttgccaaacagtttttggagcgccgtgcc
aaacagaagcaaaaccatcagcgccagcagcagcagctgcaccaacagcaacagcagcag
gagtccgtttggggtctcccacagggcggtggtggtggcagcatgccttcggcatatcaa
tgtggccacagtgcggcgcagcaggccagcttcgaggccatgcaagccagcaagaagaaa
aagaaacagcgcatggtcagggcagaccccagtattcttggattctcagtgaatgcttca
tcggatcgtcccaacatgggagagatagaaaccctggaagactaa
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