Petromyzon marinus (sea lamprey): 116947063
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Entry
116947063 CDS
T09614
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116947063
04121 Ubiquitin system [BR:
pmrn04121
]
116947063
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116947063
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Atypical E3
116947063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
TFIIA
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
116947063
NCBI-ProteinID:
XP_032818348
UniProt:
A0AAJ7X362
LinkDB
All DBs
Position
29:8457551..8474446
Genome browser
AA seq
755 aa
AA seq
DB search
MASAATSRRQSCYLCDLPRMPWAIIWDFSEPVCRGCVNYEGGDRIELVIEATRAMKRTHG
FQDHRRSPGPMAQHSGPKIVKELSASSAGLASSHVDCRGGSLQQQQQHQQHQQHQQHQQQ
QHQHQQHQQQQHQQQQQHERYARMLEYQPVSLSRMQANGLAAAVVGVNGLGHGSHGSSHG
SSSSSNNNGGGGGGGKGSNNEDPPELNRQSPTPPRRAVSIAAVAAAAAAAAAAGQPPNLL
PHGLMNGPGGTQLAVHPLLAGGGGGVVPVNKRVSVEHEHKGLPPEMGAGDGLHARGGHRV
EDPWVMASGVGKPKTVRETLISLNGGFESRLRKEHSLLGRVFPFDGGAKQGGRGVRKRKA
SPEPDCDPGGPHSGISSGIPSSVAAGVASSAGGVGGPTKLEGAASDDGPGGPPGPLAHGS
RPPPVPWIPACEALKLTLSSNAFPGSSSTAAALQQQQASSSSGGGGGGGVAATASSSDGN
RTTPPDSVASSNGTNGAAAAASSSTATSSTSSSSSSSTAAASALATLMSSSSSSSSSAAA
AASSAAAAAVAAVAADSMQDEPSPGKDGGSNAVHSTTTTTAVAAGGAMRGAGSPGSPGSS
GSGKRLAGAGEQSGGGGGGGGGANNANGSAQGSNGSGGSNGVNNNGVPAGSGGAGGPDSA
SAGAGGAGGPLCCTNCHQRLEDTHFVQCPSVAAHKFCFPCSRDSIKKQGTSSGEVYCPSG
EKCPLVGSNVPWAFMQGEIATILAGEMTVKKERDT
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcggccacgtcgcgtcgacagtcttgctatctgtgcgaccttccgcgcatg
ccgtgggccatcatctgggacttctcggagcccgtgtgtcgtggctgcgtgaactacgag
ggcggggaccgcatcgagttggtcatcgaggccacgagggccatgaagcgaacccacggc
ttccaggatcaccggcggtcgcctggacccatggctcagcattcgggccccaaaatcgtc
aaagagctgtcggcgtcttccgcgggacttgcgtccagccacgtggattgtaggggtggc
agcttgcagcagcagcagcagcatcagcagcaccagcaacaccaacaacaccagcagcag
cagcatcagcaccagcagcaccagcagcagcagcatcagcagcagcagcaacacgagagg
tacgcgcgcatgctcgagtaccagcccgtgtcgctgagccgcatgcaggcgaacggtttg
gccgcggctgtcgtgggagtcaacggactgggccacggttcgcacggctcttcacacggc
agcagcagcagcagcaacaacaacggcggcggcggcggcggcggtaaggggtccaacaac
gaagatccacccgagctgaaccgacaaagtcccactccgccccgcagggcggtgtccatc
gccgccgtagccgccgccgcggcggccgctgccgcagccgggcagccaccgaacctgttg
ccccacgggctcatgaacggccccgggggcacgcagcttgccgtgcacccgttgctggcc
ggcggcggcggcggggtggtgcccgtcaacaagcgcgtgtcggtggagcacgagcacaag
ggtctgccccccgagatgggtgcaggagacgggctgcacgcgcgcggtggccaccgcgtg
gaggacccctgggtcatggcgagcggggtcgggaagcccaagacggtgcgcgagacgctc
atctcgctcaacggggggttcgagagcaggttacggaaggagcactcgctcctcggcaga
gtctttcccttcgacggaggtgccaagcaaggtggccgcggtgtgcgcaagcgcaaggcc
tctccggagcccgactgcgaccccggcgggccccactcggggatctcctccggcatcccc
tcttcggtggctgcgggggtggcgtcgtcggcggggggcgtcggcgggccgaccaaattg
gagggggccgcgtcggacgacggccctggcggcccgccggggccgctcgctcacggctcg
cggcccccccccgtcccgtggatcccggcgtgcgaggccctgaagctgacgctcagctcc
aacgcattccccggctcatcgtccaccgccgctgcgttgcagcagcaacaagcgtcgagc
agcagcggcggcggcggcggcggcggcgtcgcggccaccgcgtcgtcgtccgacgggaac
cgcaccacgccacccgactcggtcgcctcgtccaacgggaccaacggcgccgccgccgcc
gcctcttcctccaccgccacttcctccacttcctcctcgtcgtcgtcatcaacggccgct
gcctccgcgttggcgaccctcatgtcgtcgtcgtcgtcgtcgtcgtcgtcggctgcggcg
gcggcgtcgtccgcggcggcggcggcggtggcggcggtggcggccgactcgatgcaagac
gagccgtcgcccggcaaagacggcggctccaacgccgtgcactccaccaccaccaccacg
gcggtggcggcgggtggcgccatgcggggggcgggcagccccggctctcccggcagcagc
ggcagcggcaagaggctggccggcgcgggcgagcaaagtggcggcggcggcggcggcggc
ggcggtgccaacaacgccaacggatcggcgcagggcagcaacggcagcggcggcagcaac
ggggtgaacaacaacggcgtgcctgccgggagcggcggggcggggggcccggactctgcg
tcggcgggtgccggtggcgcggggggccccctgtgctgcaccaactgccaccagcggctg
gaggacacgcacttcgtgcagtgcccgtcggtggcggcgcacaagttctgcttcccgtgc
tcgcgcgacagcatcaagaagcagggcacgagcagcggcgaggtgtactgccccagcggg
gagaagtgcccgctggtgggctccaacgtgccctgggccttcatgcagggggagatcgcc
accatcctggccggcgagatgaccgtcaagaaggagagggacacctga
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