Petromyzon marinus (sea lamprey): 116947147
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Entry
116947147 CDS
T09614
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04517
IgSF CAM signaling
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116947147
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116947147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116947147
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116947147
Intermediate filaments
Intermediate filament-binding proteins
116947147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CREPT
Viral_env_HRPV
DUF7854
Motif
Other DBs
NCBI-GeneID:
116947147
NCBI-ProteinID:
XP_032818474
UniProt:
A0AAJ7TJD4
LinkDB
All DBs
Position
29:1290329..1437436
Genome browser
AA seq
2171 aa
AA seq
DB search
MSEFDFDSEEIQQQYEYVNSRWDFPEEEDPEDENNPARLFERSRIKALADEREEVQKKTF
TKWVNSHLSRVSCRIGDLYADLRDGRMLIKLLEVLSGERLPKPTKGKMRIHCLENVEKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDSREVKSAKDALL
LWCQMKTAGYPNVRVHNFTTSWRDGLAFNALIHKHRPDLIDFDALDPADPYGNMQTAFNV
AEQKLGLTQLLDAEDIAVEHPDEKSVITYVVTYYHYFSKMKALAVEGKRIGKVLESAMET
DQMIEKYDSLASDLLDWIEQTIAILNNRTFANSLTGVQQQLQAFSSYRTVEKPAKFTEKG
NLEVLLFTIQSRMRANNQKVFLPGEGKLISEINKAWERLEKAEHERELALREELIRQEKL
EQLARRFDRKAAMRESWLTENQCLVLQDNFGSDLAAVEAATKKHEAIETDMAAYEERVHA
VLHVAQELQAENYHDVARVAARRDNVLRLWRYLQELLCGRRARLEANVALQRTLHEMLHL
LHSMEELKGRLLSQDFGKHLLGVDDLLQKHALLEADAAVLATRVHNVTAAARKFAENSDG
YQACDPQVVSARVAMLEGCLDELLRMAAERRAGLLESRRLWKLVGEISEEEAWIREKERI
LSSDDFGRDLTSIVRLLSKQRALEDELQHREQRVRQAVADGRGMVEERHFAADKIAERAG
NLLSLWSELGRAAALRKLRLEQAASLFQFLADADDADAWTMDHFRLVSSGDIGHDEFSTQ
ALAKKHRDIVEEIGNYASAIRGLQEQADALPDEVARCGGVSDRMSNTKQQYGDLLQLAAQ
RKQQLDDALALFKLFSEADACELWIDEKQKWLDQLEIPEKLEDLEVVQHRFEGLEPEMSA
QDSRIRVVNGVAEHLIRDGHPSETAIHAKRDNLNSRWDVFRKHVAQKKEALLSALSIQNY
HLECRETNSWIQDKIKLVASTQDLGNDLAGVMALQRKLFGIERDLAAIGGKLQELRGEAG
ALASRHPEQAPAILGQLEAVDGVWGDLAGTLQRREESLGEARKLQNFLRDVDSFQGWLSG
ARMAVASEELPSSLPAAETLLVQHGAIKTDADNHQDDYQKIRGVGDDVTRGETDAQHVLL
QQRLQALDGGWKDLHRMWDNRRDVLAQAHGYQTFLRDASQADSFLTNQEYVLSHTEKPAS
LEGAEAAIRKHEDFLSSMEANRDRINGVIASGKNLVLAGNAHADKIQERVDNITDRHAKN
QDTARGLQFLLKDNRDLQKFLQDCQELRLWISEKMVTASDASPCGEARGLHSKWLKHQAF
MAELASNQEWLHNVKEAGAVLVQQQPGAASLVQEKLGELQALWCQLESCTQHKAEELFDA
NRTELLAQSCSALDNWLGDVENQLQSDDYGQDLTSVNILLNKQQLLEKQVEVRAKEAEDL
SGQAEALQREGKGGPEVAGQRHALERRVHHVAGPLARRRERLLASKEGFQFNRDLEDEML
WIEERMPLATSSDHGNNLQTTQLLIKKNETLQKETEGHRPRMEEVYQRGKALLARGVVPP
SGGDRLEGLKATWTRLGQEVDKRRGRLEAALRAHQFYCDAAQAEAWMDEQELHMITQEKA
KDEASATAQLARCDQLERAVGDYGDAVRRLGDGARAMVDAAHPDSEQIRSKQSQVERLYR
SLQELVQERHVGAGGLCRLFHLQREVEDLQQWISEKEVLAVSPELGQDYEHVTMLQEKFT
ELARDTEGIGQERVDAFGKAADELLREGHPDSPTVRQWKASLDASWRKLLEKMATRKRGL
AGSARIHKLLHDARELQGRVQEKRAQIPEESGRDLNHVASLQRMHSALEHDLLALGAQVQ
QLREECSLLLSGDIGDKAPEVRRQEEKVVASWTALQEACKAHRLSLAQASERFHFFSLVR
DLMLWMETIIRQIKAQDTPRDVSAVELLMNYHQGIKAEVEARDDNFAACIDLGKSLIARN
HDAAQEIKEKLEQLNEKRRTMLDMWDNRWDWLQILIEVCQFARDSNVAEAWLVMQEACLS
TTELGDSVDAVEKLLKRHEALEKLASTWEERFSLLERPTSLEIREFRRRDEFGSQDSLHS
NHGVALHNGAGQSAMASETDARGDLPPYNGFSNSSPLDSPRLGYRSQTYQNYRPKRRGTL
EPAKSHGVAQD
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagttcgactttgacagcgaggagatccagcagcagtatgagtacgtcaacagc
cgctgggacttccccgaggaggaggaccccgaggacgagaacaaccccgctcgcctcttc
gagcggtcgcgcatcaaggccctggcagacgagcgcgaggaggtgcagaagaagaccttc
accaagtgggtgaactcgcacctgtcgcgcgtctcctgccgcatcggcgacctctacgcc
gacctgcgcgacgggcgaatgctcatcaagctgctcgaggtcctctccggcgagcgcctg
ccgaaacccacgaagggcaagatgcggatccactgcctggagaacgtggagaaggccctg
cagttcctcaaggagcagcgcgtccacctcgagaacatgggctcccacgacatcgtcgac
ggcaaccaccgcctcacgctcggcctcatctggaccatcatcctccgcttccagatccag
gacatcagcgtggaaacggaggacagccgggaggtgaagtcagccaaggacgccctactg
ctgtggtgccagatgaagacggcaggatacccgaacgtgcgcgtccacaacttcaccacg
agctggagagacggcctcgcgttcaacgccctgattcacaagcacaggccggacctcatc
gactttgatgccctggacccagcggacccctacggcaacatgcagacggccttcaacgtg
gccgagcagaagctggggctgacgcagctactggacgcagaggacattgcggtagagcac
ccggacgagaagtcggtcatcacctacgtggtcacctactaccactacttctccaagatg
aaggcgctggccgtggaggggaagcgcattgggaaggtgctcgagagcgccatggagacc
gaccagatgatcgagaagtacgacagcctggcctcggatctcctcgactggatcgagcag
accatcgccatcctcaacaaccgcaccttcgccaactcgctgacgggcgtgcagcagcag
ctgcaagcgttcagctcctaccgcaccgtggagaagccggccaagtttacagagaaggga
aacctggaggtcctgctgttcaccatccagagcaggatgcgcgccaacaaccagaaggtt
ttcttgccgggagagggcaagctcatctccgagatcaacaaggcgtgggagcggctggag
aaggcggaacacgagcgcgagctggcgctgcgggaggaactcatccgccaggagaagctg
gagcagctggcgcgccgcttcgaccgcaaggcggcgatgcgtgagagctggctcaccgag
aaccagtgtcttgtgctgcaggacaactttgggagcgacctggcggccgtggaggcggcg
accaagaagcacgaggcgatcgagaccgacatggccgcctacgaagagcgtgtgcacgcc
gtgctgcacgtggcccaggagctgcaggccgagaactatcacgacgtggcgcgcgtggcg
gcccgtcgggacaacgtcctgcggctgtggcgctacctgcaggagctgctgtgcgggcgg
cgtgcccgcctcgaggccaacgtggccctgcagagaacgctgcacgagatgctgcacctg
ctgcacagcatggaggagctcaaggggcggctgctgtcgcaggactttgggaagcacctg
ctgggcgtggacgacctcctgcagaagcacgcgctgctggaggccgacgcggccgtgctg
gccacgcgggtccacaacgtcacggccgccgctcgcaagtttgccgagaacagcgacggt
taccaggcgtgcgacccgcaggtggtgagcgcgcgggtggcaatgctggagggctgcctg
gacgagctgctgcggatggcggccgagcggcgcgccggcctgctcgagtctcgccgcctg
tggaagctcgtcggcgaaatctccgaggaggaggcgtggatccgggagaaggagcgcatc
ctgtcgtcggacgactttggccgcgacctcaccagcatcgtccgcctgctgagcaagcag
cgcgccctcgaggacgagctgcagcaccgcgagcagcgggtgcggcaggccgtcgccgac
ggccggggcatggtcgaggagaggcacttcgccgcggacaagatcgccgagagagccggc
aacctcctgtcgctctggtccgagctggggcgggcggccgccctgcgcaagctgcgcctg
gagcaggccgcgagcctcttccagttcctggccgacgcggacgacgcggacgcgtggacc
atggatcacttccgcctcgtctccagcggcgacatcggccacgacgagttctccacgcag
gccctggccaagaagcaccgggacatcgtcgaggagatcggcaactacgcgtccgcgatc
cggggcctgcaggagcaggccgacgctctgcccgacgaggtggcccgctgcggcggggtc
agcgacaggatgagcaacaccaagcagcagtatggcgacctgctgcagctcgctgcccag
cgcaagcagcagctggacgacgccctcgcgctgttcaagctcttcagcgaggccgacgcg
tgcgagctgtggatcgacgaaaagcagaagtggctcgaccagctggagataccggaaaag
ctggaggacctcgaggtcgttcagcacaggtttgagggccttgagcctgagatgagtgcc
caggattctcggatcagggtggtgaatggagtggccgagcatctgatcagggacggacat
ccgagcgagacggcgatccacgctaagagagacaacctcaacagcaggtgggatgtcttc
cgaaagcacgtggcccagaagaaggaggccctcctgtcggcgctgagcatacagaactac
cacctggagtgcagagaaaccaactcgtggatccaagacaaaatcaagctggtcgcgtcg
acgcaggacctcggcaacgacctggcgggagtgatggcgctgcagcggaagctgttcggc
atcgaacgcgacctggccgccatcgggggcaagctgcaggagctgcgcggggaagccggg
gcgctcgcctcgcggcaccccgagcaggcgccggccatcctcggccagctggaggcggtg
gacggggtgtggggcgacctcgcggggacgctgcagcgtcgcgaagagtcgctcggcgaa
gctcgcaagctgcagaacttcctgcgtgacgtcgactccttccagggctggctgtccggc
gcccggatggccgtggcctcggaggagctgcccagcagcctgcccgccgccgagaccctg
ctggtgcagcacggggccattaaaaccgacgccgacaaccaccaggacgactaccagaag
atccgcggcgtcggcgatgacgtgacccgaggggaaacggacgcgcagcacgtgttactc
cagcagcggctgcaggctctggacggcgggtggaaggatttgcaccgcatgtgggacaat
cggcgcgatgtccttgcccaggcgcacggctaccaaaccttcctgcgagacgccagccag
gccgacagcttcctcaccaaccaggagtacgtgttgtcccacacggagaagccggcctcc
ctggaaggcgccgaggcggcgatccgcaagcacgaggacttcctctcgtcgatggaggcc
aaccgcgaccggataaacggtgtcatcgcgtctggaaaaaatctggtcctggcaggaaat
gcacacgcggacaagatccaggagcgcgtggacaacatcacggaccggcacgcgaagaac
caggacactgccaggggacttcagttcctcctcaaggacaacagggacctgcagaagttc
ttgcaagactgccaggagctgaggctgtggatcagcgagaagatggtgaccgcgagcgac
gcgtcgccctgcggcgaggcgcgaggcctgcacagcaagtggctcaagcaccaggccttc
atggcggagctcgcttccaaccaggagtggctgcacaacgtcaaagaggccggcgccgtg
ctggtgcagcagcagcccggcgcggcctcgctggtgcaggagaagctgggagagctgcag
gcgctatggtgccagctcgagagctgcacgcagcacaaggccgaggagctgttcgacgcg
aaccgcacggagctgctcgcgcagagctgctcggcgctcgacaactggctgggggacgtg
gagaaccagctgcagtcggacgactacgggcaggacctcaccagcgtcaacatcctcctc
aacaagcaacagctgctcgagaagcaggtggaggtgcgtgccaaggaggcggaggatctg
tccggccaggccgaagcgttgcaacgtgagggcaagggcggccccgaggtggccggccag
cggcacgcgctggagcggcgggtgcaccacgtggccgggccgctggcgcggcggcgggag
cggctgctcgcctccaaggagggctttcagttcaacagagacctggaggacgagatgctc
tggatcgaggagcggatgccactcgcgacgtcttccgaccacgggaataacctgcaaacg
acgcagctcctcatcaagaagaacgagaccctgcagaaggagacggagggccaccgtccg
cgcatggaggaggtgtaccagcgggggaaggcgctgctggcccgcggggtggtgccgccc
agcggcggcgaccgcctggaggggttgaaggcgacgtggacccgcctcgggcaagaggtg
gacaagcggcggggacggctggaggcggccctgcgggctcaccagttctactgcgatgcg
gctcaggccgaggcctggatggacgagcaggagctgcacatgatcacccaggagaaggcc
aaggacgaggcgagcgcgacggcgcagctcgcgcgctgcgaccagctggagcgcgccgtt
ggggactacggcgacgccgtgcgccgccttggggatggcgcgcgggccatggtggacgcc
gcacaccccgacagcgagcagatcagaagcaagcagtcgcaggtggagcggctgtaccgc
agtctgcaggagctggtgcaggagaggcacgtcggggcgggggggctgtgcaggctcttc
cacctgcagcgggaggtggaggacctgcagcagtggatctctgagaaggaggtgctcgcc
gtctccccggagctgggccaggactacgagcacgtgacgatgctgcaggagaagttcacg
gagctggcccgagacacggagggcatcgggcaggagcgcgtcgacgccttcggcaaagcg
gccgacgagctgctgcgcgagggccaccctgactcgcccaccgtgcgccagtggaaggcc
tcgctcgacgcgtcgtggcgcaagctgctcgagaagatggccacgcgcaagcggggcctg
gcgggctcggcacggattcacaagctgctgcacgacgcgcgggagctgcagggccgcgtg
caagagaagcgagcgcagatccccgaggagtcgggccgggacctcaaccacgtggcatcg
ctgcagcgcatgcactcggcgctggagcatgacctgctggcgctcggagcacaggtgcag
cagctgcgcgaggagtgctctctgctgttgagcggcgacatcggagacaaggcgcccgag
gtccgcaggcaggaggagaaggtggtggcctcgtggaccgccctgcaggaggcctgcaag
gcccaccggttgagcctcgcccaggccagcgagaggttccacttcttcagcctggtgcgc
gacctcatgctgtggatggagacaatcatccgacagatcaaggcccaggacacccccagg
gacgtgtctgcggtggagctgctcatgaactaccaccagggaatcaaggcggaggtggag
gcccgcgacgataacttcgcggcctgcattgacctgggaaaatcgctcatcgcgaggaat
cacgacgccgcacaagagattaaggaaaagctggagcagctgaacgagaagcgacggacc
atgctggacatgtgggataatcgttgggactggctgcagatcttgatcgaggtgtgccag
tttgcgagggattcgaacgtggcggaggcctggctggtgatgcaggaggcgtgcctctcc
accacggagctgggcgacagcgtggacgccgtggagaagctgctgaagcggcacgaggcg
ctggagaagctggcctccacctgggaggagcgcttctcacttctcgagcggcccacctcg
ttggagatccgggagttccgccgccgcgatgagtttggcagccaggactcgctgcacagc
aaccacggcgttgcgctgcacaacggagccggacagtcggccatggcttccgaaaccgac
gcccgcggcgatctcccaccgtacaacggcttctcaaacagctcgccgctcgactcgccg
aggctgggctatcgctcacaaacctaccagaactaccggcccaagcgccggggcacctta
gagccagcaaagtcgcacggcgtcgcgcaagactga
DBGET
integrated database retrieval system
