Petromyzon marinus (sea lamprey): 116947154
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Entry
116947154 CDS
T09614
Name
(RefSeq) RNA-binding protein Nova-1-like
KO
K14944
RNA-binding protein Nova
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116947154
Spliceosome [BR:
pmrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116947154
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
116947154
NCBI-ProteinID:
XP_032818481
UniProt:
A0AAJ7X236
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Position
29:complement(1600752..1661552)
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AA seq
480 aa
AA seq
DB search
MITMASPATSQQQQQLELALELDPPDSRKRPLETPTEAGSTKRSNTAEEGLYFLKILIPS
YAAGSIIGKGGQTIVQLQKDSGATIKLSKSKDFYPGTTERVALIQGAPDSLNGVHCFIAD
KIREMPTASGKSEAISVLQPQTTVNPDRMKQAKILVPNSTAGLIIGKGGATVKAIMEASG
SWVQLSQKPEGINLQERVITVSGEAEQNQKAIELILQKIQEDPQSSSCLNISYCNLSGPV
ANSNPTGSPYANSAEMLPGSAMAAGLLGQTNLATVAAFPTLVSGFNGNDLVAISSALNTL
ASYGYNLNPLGLGVSPAGATGMLAAAASSSNPAAAAAANLLASYASEVAGVGPGSAHFPL
GGLSASALTNGYFASSPLTAGAILTAEKSSEANKDMIEIAVPENLVGAILGKGGKTLVEY
QELTGARIQISKKGEFIPGTRNRKVTITGTTASTHAAQYLITQRITYEQGVRASNPQKIG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaatggccagccccgcaacatcccagcagcagcagcagctcgaactggccctg
gagctcgaccctccagactcccgcaagcggccgctggagacgcccaccgaggcgggcagc
accaagaggagcaacacggccgaggaaggcctgtacttcctcaagattctcattccgagc
tatgcagcgggctccatcatcggcaaaggtgggcagaccatcgtgcagctgcagaaggac
agtggcgccacaatcaaactctccaagtccaaggacttctaccccggtaccacggagcga
gtggcgctcatccagggcgccccggactccctcaacggggtgcactgcttcatcgccgac
aagatccgcgagatgcccaccgccagcggcaagtcggaggccatcagcgtcctgcagccg
cagacgaccgtcaaccctgaccgcatgaagcaggcaaagatcttggtcccaaacagcacc
gctggcctcatcatcggtaaagggggcgcaacggtgaaggccatcatggaggcatctggc
tcctgggtgcagctctctcaaaagccagagggcatcaacctccaggaacgtgtcatcacg
gtcagcggtgaggccgagcaaaaccagaaggccattgagcttatcctgcagaaaatccag
gaagatccgcagagcagtagctgcctcaatatttcttactgcaacctgtcgggtcccgtc
gccaattcaaacccgacggggtcaccgtacgcgaattcggcggagatgctgcccggctcg
gcgatggccgccggtctgctgggccaaaccaatctggccacggtggccgccttccccacc
ctcgtgtcgggcttcaacggcaacgacctggtggccatctcttcggccctcaacacactg
gccagctacggctacaacctaaaccctctgggcctaggggtcagccccgccggggcgacc
ggcatgctcgctgcggcggcctcgagctccaaccccgccgccgccgccgcggcaaacctg
ctggccagctacgccagcgaggtggccggggtggggcccggctccgcgcattttcccctg
ggggggctttccgcgtccgccctcaccaacggatatttcgcgtcatcgcccctgacggcg
ggcgccattctcaccgcggagaaatcgtcggaggcgaacaaggacatgatcgagatcgcc
gtccccgagaatctggtcggtgccatcctcggcaaaggcggaaagacgctcgtggaatac
caagaactgacgggggcgcgcatccagatctccaagaagggagagtttatccctgggacg
cgtaaccggaaggtgaccatcacggggacaaccgcctcgacgcatgccgctcagtatctc
atcacgcagcgcatcacgtacgagcaaggcgtccgggctagcaacccgcagaaaattggt
tag
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