Petromyzon marinus (sea lamprey): 116947185
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Entry
116947185 CDS
T09614
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116947185 (TP53BP1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_3
BRCT_2
Tudor_5
Tudor_2
BRCT
BAHCC1-like_Tudor
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
116947185
NCBI-ProteinID:
XP_032818589
UniProt:
A0AAJ7TIP5
LinkDB
All DBs
Position
1:complement(14598728..14678903)
Genome browser
AA seq
2363 aa
AA seq
DB search
MDQSGNPADDEFSEKDAPCLIVEDSQEMLTSGEAASSYQTLITHKLTALREQPVSPELAL
LSTPGRSAQQKISTDVLDGAQRPDPAPSESCSLELNTMPHIPHLKDKQTSVVKDAFEQPA
TEVVKPSSVEEASYASSTKKSSLRPTQVYRMAERTVHMLLHGGLRLEPSEHAPSTGNVSG
VVELTMAGDDAERVDESCTQEDMFECSQILESEAKPLSPCYTPVDSLKVLHLSGHQPLAS
ESLSTECSEDMVAPSPNAYSSTPIIIPSSPTAHDSQDSSLDMEEPMDVLVATPPHCKSDE
PMEMQSPTCTTPLPAEIPKCIPNVQATAAQADNEIQPSVPLSPKPASQPVQGVLKNPEEA
QIQREVQTQHVTQAQQTSHAHLATHEADTQHYAQQLQTQKNTQEAQTHNMPQSQQVTQDA
QMLKVSQDVQLSQELQEAPQDEQAQPLHTESPEEGLTHLKSQTKQASQQPQTHPITQEAQ
EHHKSQEVQTHQEKTQEQENTKIHQSHNVTQAAHIQEKPSSPVAICIPPSEPEFSHDIFI
PTPADGINPSASNVPKPVDTPLETEPITTVRSVSDVNLDTSKGGDASFHLQLFSEEHTEL
DHLASLQQFISKQESQNLQTSQIPSDKLDTDTKLVSQSDVVEDKNNQPEATTDPLNKSEM
PLKHGQGDPSKLASDTKEIQIESGPSVNLHLCSTAKEDTSEDQDSEPNEETQIDEEMEVA
LDFTGDNSSLLEKNTDSQLQVMESKVSEPQMSCPPNKSKDALGKHDIDKETKIIAIVPAL
EPSHSDCVSLETSNVKNDQPEQNKNSQSELKKGSEAVEAMQVEKVMDTNTSLSSQPKFKC
LEVSDEATVKNQDPRSPLEVEVDGSSGDCEDDTGADVALHLSLSESQAESQITDSSVIVD
NSVSNLSGKSIQNGNSTAPVDPQTRSLILNESGTSEKCSLMIIDNETQNTEALVLEKHAA
ESQHFQSETITAQPKGSAQDVCSQSKAVNKDAEEMQISQNKPRLEESEGGFQGRAVEAEV
RNVLEHETSQQQAAGATKLSSSEDDGDNSVVEETNKANLSCSSSNEVQFHFTLPKEGEVI
RLQANITPPLIRQMRLAPRHSTPIGGSEPPRAPSAASDVVAGDDSKRNLSQEGAQPSPSS
QRSQGARGDLTSQGGVPESPLTPQIQGNQEDVSFPEMQRIQQEEKQSVREEEKTREQIKG
KAHEKTCLEPAQIITSTPIDNEEQPHFSLKKPEIQMEEFVEDESRPPTVQSAARKGGEDG
TVIETTNNATSSSLNKIQGSEEASEQEILKICEGTEKPQVETSDSHAQDPVTLIAPSVLR
PTEGQSPLPRSCQNEPIRQKEQTTEPNPLDEQEEMEVDSSAARNEAVDPGLGKVEWEKNA
ADNVHVGEKAASGVGLEEEAGMTEHAALFAQTSSCTSGLSETAGQTKETQTESRVGFNVG
VERGLGLTKLRNIAVQTREDGESTSHGTEGEADTVSLHSQEEDSLPLPAPAPGRLVHRHV
RTIREVKITRVITDVYYVNGKEVERRVTEEAEAPIVERQEYEQSTTSPSRTVSSLTSGDL
ADVSSLSTKVSNGTGSLQRTGSSTSGGGHSSVSLNRSGSGGTLADPPSASLQRSGSDGSG
GHSSGGLHKPCAAAAAAVGGHKSTDKGHHTSKKDMEMEKDVSTNIRGSGRAVFEDNRGKQ
SSKSTLLKVQAGRGCEEVWGEGARVGYSRHTHSMPRTTRGKGRGRGHRAPRKRYAWQGQR
SVAPIMFLEPDTEWEEIAGDGDAGDEDDADPIEPEPTAEWTLVADRGPQAKNLKRATECS
TIPAAARGSSDGDMQSDGGVIPGPEWLTADSGGPCTSRAALAAAGPFRRSSLQRSASPLM
HLQAEQDVPVVTVAGEGSNSGSSSLVGLRVVAKWSSNEYFYSGRVVGEREAGRCRVRFDD
GYECDVAGRDVLLCDPIPLHTQVTALSHDEYFSAGYIKGHRREEDELYYCVEKDGQRKWY
RRVAVILSSEQGDQLRAQYSLDPLCPPTPHKRMADVSLDNLVEGKRQRRLGTAAEGRSPT
TQAARQPQSPRVVPSTGKRRLQLTDQGSSDVGSPAKRGRKTTSAKHSSSGGSSPCKSIGG
HSPTHSLTEERPVPQACPSSELFCGYSFVLTVSTPADRVYCRPPRFSTDESSGTEEEQAA
VPYDYAAIEAQIRAAGGTVLQNLNPTLCTELSLCFLVCDFPCRSREYLLALAAGIPCVSH
MWVRDTCLLNTQHDYRKYMLPSGYSLTAGSIIEWHGQKNLFEDTRVLLVSEDHESFLDLW
SEILMAAKAATVTCHKPTPNYDVAVAKYDLLVSDASCPPGMLHCAAALEMPVVSSEWLVQ
CLVTGHRVPFTSHPAFRHDHRPV
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagtgggaacccggccgacgatgaattttctgagaaggacgcgccatgtctt
attgtggaagactcgcaggagatgctaacatcaggcgaggctgcatctagctaccaaaca
ctcataacgcacaagcttacagctctacgagaacagccagtcagccctgaactggcacta
ctgtccacacctggaaggtctgcacagcagaagataagtacagatgtgcttgatggagca
cagagaccagaccctgcaccctcagaatcgtgtagcttagaattaaacactatgcctcat
attcctcatcttaaagataagcagacatctgttgttaaagatgccttcgagcagcctgcc
actgaggtggtgaaacccagcagtgtcgaagaggcctcgtatgccagctctacaaagaag
agtagcctccggcctacccaggtctaccgcatggcagagcggactgtgcatatgttgttg
catgggggactgaggctggagccgtcggagcacgcgccttccactggcaacgtgtcggga
gtagtggagttgaccatggcgggcgatgatgcagagagggtggacgagtcttgcacacag
gaagacatgtttgaatgttcacagatccttgaaagtgaggccaaaccactttctccatgc
tacacgcccgtggactccctgaaagtgcttcacctgtctggacaccagcccctggcctct
gagagcctgtctactgagtgctctgaggacatggtagctccctctcccaatgcctacagc
tccacacctatcattataccatcctccccaacagcccatgattctcaagacagcagtctg
gatatggaggagcccatggatgttctagttgctacaccccctcactgcaagtctgatgag
cccatggagatgcaatccccaacctgcaccactcctcttccggccgaaattcccaaatgc
atacctaatgtacaagccactgctgcacaggcagacaatgagattcagccttctgttccg
ttgtcacccaagccagcatctcaacctgttcaaggggtactcaagaatcctgaggaggca
caaatccagagagaagtgcagacacaacatgtgacacaggctcagcagacatcacatgca
cacctggctacccacgaggcagacactcaacattatgcacaacaattgcagacacaaaaa
aatacccaagaggcacagacacataacatgccacagtctcagcaggttacacaggatgca
caaatgctgaaggtctctcaagatgtacaattatcacaagaattacaagaggcaccccaa
gatgaacaggctcagccactacacactgagtctcctgaagagggactaacacacctgaag
tcacagaccaaacaggcttctcagcagccacagacacacccgatcacccaagaggcacaa
gaacaccacaaatcccaggaggtgcaaacacaccaagagaagacacaagaacaagagaat
acaaagatacatcagtcgcataatgtaactcaggctgctcatattcaggagaaaccatcc
tctccagttgccatctgtattcctccatcagaacccgagttctcacatgacatttttatc
ccaacacctgcagatggtatcaatccctcagcctctaatgtcccaaagcctgtggacaca
ccattggaaacggagccaataactacagtgcgaagtgtatcggatgtcaatctggatacc
agtaaaggaggagacgcgtctttccacttgcagcttttcagtgaagaacacacggagttg
gaccacctagcatccctgcagcagtttatatctaagcaggagtctcaaaatttgcaaacc
agccaaataccatcagacaagctggacacagacaccaaactcgtcagccagtccgatgta
gttgaagataaaaacaaccaaccagaagcaacaaccgaccctctgaataaatctgaaatg
cctctaaagcatgggcaaggtgatccatccaaattggccagtgacacgaaggaaatacaa
attgaatctgggccatctgttaatttgcatttatgctcaactgcgaaagaggacacttcc
gaggatcaggacagtgaaccaaatgaagaaacacagattgatgaggaaatggaggtggct
ctggatttcacaggggataattcatcattactggaaaagaatactgattctcagttacag
gtgatggaatctaaggttagtgagcctcaaatgagttgtcccccaaataagagcaaagat
gctttaggaaaacatgatattgataaagaaacaaagataattgccattgttcctgcacta
gagcctagccatagtgattgtgtttctttagaaactagtaatgtaaaaaatgatcagcct
gaacaaaataaaaattcacaatcggagcttaaaaaaggttcggaagcagttgaagccatg
caagttgaaaaagttatggataccaacacaagtttgtcatcacaaccaaaatttaaatgt
ctagaagttagtgatgaggcgactgtcaaaaatcaagaccctcggagcccactggaggtg
gaggtggacggttcatcaggggattgtgaagatgacacaggagctgatgtggctctccac
ctgtcactgtcagaatcccaagctgaatcacaaataaccgattcatcagtcatcgtggac
aacagtgtcagcaacttgtcaggaaaaagcatccaaaatgggaactccacggcaccagtc
gatccccaaacaaggtcactaattttaaatgaaagcggaacgtctgaaaaatgtagtttg
atgataattgacaacgaaacccaaaatacagaagctttagtgcttgaaaagcacgctgca
gaaagtcagcatttccaaagcgaaactataacagcacagcctaaagggtctgctcaagat
gtctgctcacaaagtaaagctgtgaacaaggatgcagaagagatgcagatatcacaaaac
aaaccaaggttggaagaatctgaaggtggctttcagggtagagctgtggaggctgaagta
agaaatgtcctggaacatgaaacatcgcaacaacaagcagcaggggcaaccaagctgtcc
tcgtctgaagatgatggtgataactcagtagtagaagagaccaataaggctaacctttcc
tgttcatcatctaatgaagtgcagttccactttactttgccaaaagagggtgaagttatc
cggctgcaggccaacatcaccccacctcttatccggcaaatgcgacttgctccccgacac
agcacacccattggtggctcagagcctccccgggccccctccgcagcaagcgacgtagtg
gccggagatgacagcaagagaaacctttcacaggagggagcccagcctagcccttcctcc
cagcggagccagggtgcgcgaggggacctcaccagccaggggggggtccctgaaagccct
ttaaccccgcagatacagggtaaccaagaggacgtgagctttccagaaatgcaaagaatc
cagcaagaggagaagcagagtgtcagggaagaagagaagacgagagagcaaattaagggg
aaggcgcatgagaagacttgcctagaaccagcacagataatcacttcaacacccattgac
aatgaggaacagccccacttcagcctaaaaaaaccagaaatacaaatggaagagttcgta
gaagatgaatcgaggccacctacagtgcaatctgcggcccgtaagggtggtgaagatggt
actgtcattgaaacaaccaacaatgctacatcttctagcttaaacaaaatccaaggatcc
gaggaagctagtgagcaagagatactgaagatttgtgaagggacagaaaagccacaagtg
gaaacttctgattcccacgctcaagatccagtaaccctgattgccccctcagttcttaga
ccaactgaagggcaatctcctctgcccagatcctgccagaatgagcccatccgacaaaaa
gaacagacaactgaaccaaatcctctggatgagcaagaagaaatggaagtggactcttca
gcagctaggaatgaggctgtagaccctggattgggaaaggttgaatgggagaagaacgca
gctgataatgtgcatgttggtgagaaagctgcaagtggagttggtttggaggaggaagct
ggcatgacggagcatgctgcattatttgctcagacatcttcctgcacatctgggttatct
gagacagctggtcaaaccaaggagacccagacagaaagcagagttggatttaatgtggga
gttgagagaggcctgggcttgacaaagctacggaacattgctgtgcagacgagggaggat
ggagagagcacaagccatggcacagagggggaggccgatacagtctctctccacagtcag
gaggaagacagtttgcccttaccagccccagcacccgggaggctggtgcacaggcacgtg
cgcacaattcgcgaggtgaaaatcactcgtgtcatcaccgacgtctactacgtcaatggc
aaggaggtggaacggagggtcactgaggaggcagaagcaccaattgtggaacggcaagag
tatgagcagagcacaacatcgccctcccgcaccgtgagctcgctcacgtccggtgacctg
gctgacgtcagctcattgtccaccaaggtgtccaacgggacgggcagcctgcagaggacc
ggcagcagcacgtctggtggaggccactcgagtgtcagcctcaaccgctccggtagtggg
ggtacattagcagatccacccagcgccagcctccagaggtcagggagtgatggatctggt
ggccacagcagcgggggcctccacaagccatgcgcagcagcagcagcagccgtcggtggg
cacaagtccacagacaagggccaccacacctccaagaaggacatggaaatggagaaagat
gtttccacaaacatccgcggcagtggtagagctgtctttgaggacaacaggggaaagcag
agcagtaaaagtacacttcttaaagtgcaagctgggcgtggctgtgaggaggtctggggg
gagggagcacgagtcggatactccagacatactcacagcatgccacggacaacgcggggc
aaaggcaggggccgtggccaccgtgcaccgaggaagcgttatgcttggcagggtcaacga
agcgttgctccaattatgtttttggagccagataccgaatgggaagagattgcaggtgat
ggagatgcaggggatgaggatgatgcggatccaattgagccagagcccacagcagagtgg
acactagtagcagaccgtggtccccaagccaagaacttaaagcgtgcgactgaatgcagc
accataccagcagctgcccgggggagctctgatggagacatgcaatcagatggtggagtc
atcccgggcccagagtggctaaccgccgactccgggggcccctgtacaagtcgagctgcg
ttggctgctgccgggccctttcgtcgctcttccctgcaacgctcagcctcgccgctcatg
catcttcaggcagagcaagatgtgccggtggttacggtagccggggagggcagcaacagc
ggcagcagcagcctggtgggactgcgcgtcgtggccaagtggagctctaatgagtacttc
tactcggggcgggtggtgggcgagcgtgaggccgggcggtgccgtgtgcgcttcgacgac
ggctacgagtgcgacgtggcgggccgtgacgtactgctgtgtgaccctatcccactgcac
acgcaggtcacggcgctctcccatgacgagtacttctccgcagggtacatcaaggggcac
cggagggaggaggacgagctgtactattgtgtggagaaagacgggcagcgcaagtggtac
cggcgtgtggctgtcatcctgtccagcgagcagggcgaccagctcagagcacagtacagc
ctggacccgctgtgcccacccactccacacaagcgcatggcagatgtcagcctcgataac
cttgtggagggcaagaggcaacgacggcttggaacagcagcagaaggtcggtctccgacc
acacaagctgcacggcaaccgcaaagcccccgggtcgtgccctccactggcaagcgaagg
ctgcagctcaccgaccagggatcatctgatgtcgggtcgccagctaagcgaggccgcaaa
accaccagtgccaagcactcatcatcaggaggctccagcccatgtaagagcattggcggg
cactcgcccacgcacagcctcacggaggaacggccagtgccacaggcgtgccccagctct
gagctcttttgcggctacagcttcgtgttgacagtgtccacccctgcagatcgagtgtac
tgccgaccaccccgcttctccactgatgagagctcgggcacggaggaagagcaagcagca
gtgccgtatgactacgcagcaattgaggctcagattcgggcagcaggaggcaccgtcctg
caaaaccttaacccgaccctgtgcacagagctttcactctgtttcttggtgtgcgacttc
ccgtgtcgctcacgcgagtacttgctggcgctagcggctggcataccctgtgtgtcgcac
atgtgggtgcgggacacttgcctgctgaacacccagcatgactaccgtaaatacatgctt
ccctctggctacagcctcactgctggctccatcatcgagtggcacggacagaaaaatctc
tttgaagacacaagggtactgctggtgtccgaggatcacgagagcttcctggacctgtgg
tcggagattcttatggcggcgaaggctgccacagtcacctgccacaagcccaccccgaac
tatgatgttgcagtggccaagtacgacttgctggtgtcggatgcatcatgccctcccggc
atgctgcattgtgctgctgctctagaaatgcccgtggtgtcctctgagtggctggtgcag
tgcctggtaacaggacaccgtgtccccttcacctctcaccctgccttccggcatgaccac
cgcccagtttaa
DBGET
integrated database retrieval system
