KEGG   Petromyzon marinus (sea lamprey): 116947218
Entry
116947218         CDS       T09614                                 
Symbol
PNN
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03013  Nucleocytoplasmic transport
pmrn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116947218 (PNN)
   03015 mRNA surveillance pathway
    116947218 (PNN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116947218 (PNN)
   03041 Spliceosome [BR:pmrn03041]
    116947218 (PNN)
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     116947218 (PNN)
Spliceosome [BR:pmrn03041]
 Complex C
  Other components
   EJC/TREX
    116947218 (PNN)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA Synapsin_N
Other DBs
NCBI-GeneID: 116947218
NCBI-ProteinID: XP_032818613
UniProt: A0AAJ7TL69
LinkDB
Position
29:5483546..5494124
AA seq 613 aa
MAVEASSLREQLERARQSLHSVDENIKKLTGRDPNDLRPGPGRRLSLTGGPQGLGRGRGM
GLLRRGLSDTGLLAGMGGPPAKKRDLEGTMGRPGPERRVRRESHPESDAEDDEDVQKPAV
QSSVVNTAKERTRRDLIHDQNPDEKGRQRNRRMFGLLMGTLQKFKAEASEENEKQKRRHE
IEAKVEEQAEEERRALALERRELFEERRNQQATLRLLEVKVQLAHLQEEWDAHNQKLLPF
IRTKTKPHMFFLPAKMNPDTQKLLEESQKTLSDEFAKRRADFLEEIERMEVRPRRARIRG
RLGPTPDGDGDLGGGPPWLGEGPETEDVEGKAKMGDVGEDTDGAPVQDVEMSGGPEGEQA
GQDQPEQEKGSFEAKHQEEGMEEGEVGEVGERAQPEGQEVSKPEETKTPVAKEECSERRR
ESDRGQRIRIVRRGPERDRGGSPDRRRDGWDRRRGVMGFGGSRSHEQGGSGGGRRRRHSS
ERGRREREPVRRSPRPRSPRHARHLERGDKNETHRKVRAGSDGDKKGGHSGEGGHRGERQ
RRLSEGGARRRHSEGHRGGEAGKRLSSEGSAEKGKEAEAAGQQGDTTGEDVQMMVPAVET
EGQEEPGAQAVES
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggcggtggaggcgtcgagcctgcgggagcagctggagcgcgctcgccagagcctccac
agcgtggacgagaacatcaagaagctgacgggacgcgacccaaacgatttgcggcctgga
ccgggcaggcggctgtccctcacgggtggaccccagggccttggcagggggcgaggaatg
gggcttctgaggcgtgggctctcggacacggggctactggcaggaatgggcggaccgccg
gccaagaagagagatctggaaggaacgatgggcaggccggggccagagcggcgggtccga
cgtgaatcccaccccgagagcgacgccgaggacgacgaggacgtgcagaagcccgcggtg
cagtcatcagtggtgaatactgccaaggagcgaacacgccgagacctcatccatgaccag
aacccagacgaaaagggacggcagaggaatcggcgaatgtttgggctgttaatggggacc
ctgcaaaaattcaaggccgaggcatcggaggagaacgaaaagcaaaagcggcggcacgag
attgaggcgaaggtagaggagcaggcggaggaggagcggcgcgctctggcgctggagcgg
cgtgaactttttgaggagcggcgcaaccagcaggcaacactgcgcctgctcgaggtcaag
gtgcagctggcgcacctgcaagaggagtgggatgcacacaaccagaagctgctcccgttc
atccgcaccaagacgaagccgcacatgttcttccttccggccaagatgaaccctgacacg
caaaagctgctggaggagtcgcaaaagactctgagtgatgagtttgcgaaacgacgcgcc
gacttcctggaggagattgaaagaatggaggtgcggccacgacgcgcgaggatccggggg
cggttgggtcccacgccggacggagacggggacctggggggcggccccccctggctgggg
gagggccctgagacagaggacgtggagggtaaggcgaagatgggggacgttggagaggac
acggatggagcgccggtgcaggatgtagagatgtcgggcggccctgagggtgagcaggca
gggcaggatcaaccagagcaggagaagggcagcttcgaggccaagcaccaggaggagggg
atggaggagggggaggtgggggaggtaggggagagggcccagcctgaagggcaggaagtg
agtaagcctgaagagacgaagacaccggtggccaaggaggagtgtagcgagaggcgcagg
gagagcgatcgtgggcagcgaatccgcatcgtgcggcgggggccggagcgtgaccggggg
ggcagcccagacaggcggcgcgatggctgggaccggcgcaggggggtcatgggattcggg
ggcagccgcagccacgagcagggcggctcgggaggggggcggcggcggcgccatagctcg
gagcggggacgtcgggagcgggagccggtgcggcggagcccccgcccacgctcgccccgt
cacgcgcgccacttggagcgcggtgacaagaacgagacccacaggaaggtcagggctggg
tcggatggggacaagaagggggggcacagtggggagggggggcacaggggggagaggcag
cgcaggctctcagagggcggggctcgtcgcaggcatagcgaggggcacaggggaggcgag
gccgggaagcggttgtcctcggagggcagcgccgagaaaggtaaggaggcagaggccgca
gggcagcagggcgacacaacaggggaggatgtgcagatgatggtgccagcagtggagacg
gagggtcaggaggagccgggggcacaggcagtggagtcgtag

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