Petromyzon marinus (sea lamprey): 116947435
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Entry
116947435 CDS
T09614
Symbol
UBA1
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116947435 (UBA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116947435 (UBA1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116947435 (UBA1)
Enzymes [BR:
pmrn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
116947435 (UBA1)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
116947435 (UBA1)
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116947435 (UBA1)
Exosomal proteins of other body fluids (saliva and urine)
116947435 (UBA1)
Exosomal proteins of colorectal cancer cells
116947435 (UBA1)
BRITE hierarchy
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_UFD
E1_4HB
Viral_DNA_Zn_bi
Motif
Other DBs
NCBI-GeneID:
116947435
NCBI-ProteinID:
XP_032819060
EnsemblRapid:
ENSPMAG00000041999
LinkDB
All DBs
Position
30:1926380..1962199
Genome browser
AA seq
1058 aa
AA seq
DB search
MSSSPPAKKRCVSADNTGSYCTASKAAKTSLPKDADMAKNGGNDVDIDEGLYSRQLYVLG
HEAMKRMQRSDVLVSGMRGLGVEIAKNVILGGVKSVSVHDQGNAEYLDLSSQFYLPEKDL
GKNRAEVCQPQLSELNTYVHVSAYTGELTEEYLSKFLVVVLTNSTLEECLRVGDLCHSKG
IKFIAADTKGLFGQLFCDFGDEFTVMDSTGEQPVSAMISAVTKDAVGVVTCLDETRHGFE
SGDHVIFTEIQGMTELNNCKPREIKVLGPYTFSIGDTSGFSDYKRGGIATQVKMPKKISF
KTFSKALAEPDMVVTDFAKFERPGQLHLAFQALHDFVKKHKRLPKPRNQADADELVVLAR
GLNDRATSAARQERLDEALVTELSFSAMGDLAPINAFIGGIAAQEVMKACTGKFTPLTQW
LYFDALECLPEEGKETLLTEESCKPKGSRYDGQIAVFGSDFQKKLFAHKLFLVGAGAIGC
ELLKNYAMMGLACGEGGMITVTDMDTIEKSNLNRQFLFRSWDVQKMKSETAAAAVKKMNP
ELHITAHQNRVEADTERVYDDDFFEGLDCVSNALDNVDARMYMDRRCVYYRKPLLESGTL
GTKGNVQVVLPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAE
NVNQYLQDPKFMERTLKLPGTQPLETLEAVRRALVQERPKNWEDCVAWSRNHWQHQYNNN
IRQLLHNFPPEQLTSSGAPFWSGPKRCPHYLAFDVNNVLHMDYVMAGANLFATMYGIKGS
RDRVATAEVLAHVKVPEYVPRSGITIHVSDQELQNAATGSMDDDKLEEVKNTLSSLDTLN
NFRMVPIEFEKDDDANFHMDFIVAASNLRAENYDISPADRHKSKLIAGKIIPAIATTTAA
VVGLVCLELYKIVNGNKKLESFKNGFMNLALPFFGFSEPIAAPKHVYYDTEWSLWDRFEV
NGIQENGEEMTLKEFTAYFLEKHELKIMMLSQGVSMLYSFFMGQAKLKERLDQKMTEIVT
KVSKKKIGKHVKALVFELCCNDTNNEDLEVPYVKYTFR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttccccaccggccaagaagcgctgtgtctctgccgacaatacgggttcctac
tgcacggcgagcaaagcggccaagacctctctgccaaaggacgcggacatggccaagaat
ggaggcaatgatgttgacatcgatgagggcctgtactcaaggcagctgtacgtgctcggc
cacgaggcgatgaagcgcatgcagcgctcggatgtactcgtgtcgggcatgcgggggctg
ggcgtggagatcgccaagaacgtcatcctgggcggcgtcaagtccgtgtccgtccatgac
caggggaacgccgagtacctggacctctcctcccaattctatctgccggagaaggacctg
gggaagaaccgggccgaggtgtgccagccccaactctctgagctcaacacctacgtgcac
gtgtcggcgtacacgggcgaactcaccgaagagtacctttccaagtttctggttgtggtg
ctgaccaactccaccttggaggaatgccttcgcgtcggcgatttatgtcactccaaaggg
atcaagttcattgcagcagacaccaagggcttatttggacaactcttctgtgattttggt
gacgagttcacagtgatggattcgactggagagcaacccgtcagcgctatgatctctgca
gttacaaaggacgccgttggagttgttacgtgtctcgatgaaacccggcatggatttgag
agtggggaccatgtcatcttcactgaaatccaggggatgacggagctcaataactgcaaa
cctcgggagatcaaagttcttggcccatacacattcagcatcggggacacgagcggattc
tcagactataaacgtggtggtattgccacacaggtcaaaatgcccaagaagatcagcttt
aaaacgttcagcaaggcattggcggaacctgatatggtcgtgacagactttgccaaattt
gaacgtccgggtcaactccacctcgccttccaggccctacatgactttgtcaaaaagcac
aaacgcctgcccaaaccacgcaaccaggctgacgcagacgagttggttgtactggcacgg
gggctgaacgatcgcgccactagcgcggcgcggcaggagcggctggatgaggcgctggtg
accgagctgtccttcagtgccatgggagacctggctcccatcaacgccttcatcggaggc
atcgcggcccaggaggtcatgaaggcttgtactggaaaattcacacctttgacccagtgg
ctgtactttgatgcactggagtgccttccagaagaggggaaggaaacacttctcaccgag
gaaagctgcaagccaaaaggctcacggtatgatggccagattgcagtcttcggaagcgac
ttccaaaagaagcttttcgctcataagctcttcctggttggggcgggtgccattggttgt
gagctgctgaagaactacgccatgatggggcttgcatgcggtgaaggcggcatgatcacg
gtcaccgacatggacaccatcgagaagtcaaatctcaatcggcagtttctcttccgcagc
tgggatgtacagaaaatgaagtccgagacggcggccgcggcagtgaagaagatgaacccg
gagttgcacatcacggcgcaccagaaccgcgtggaagccgacacggagcgcgtgtacgac
gatgacttctttgagggcctcgactgtgtcagcaacgccttggacaacgttgacgcacgc
atgtacatggaccggcggtgcgtttactaccgcaaaccgctgctggagagcggcacgctg
ggcaccaagggcaacgtgcaggtggtgctgcccttcctcacagagtcgtacagctcgagc
caggacccgcccgagaagtccatcccaatctgcaccctcaagaacttccccaacgccatc
gagcacaccctgcagtgggcacgtgacgagtttgaaggccttttcaagcagcctgcagag
aacgtcaaccagtacctacaggaccccaagtttatggagcgcacactgaagctgcccggc
acacagccgctggagacgcttgaggccgtgcggcgtgccctcgtgcaagagcggcccaag
aactgggaggactgtgtggcctggtctcgcaatcactggcagcaccaatataacaataac
atccgacagctgctgcacaacttcccgcccgagcagctcacaagctctggtgctcccttc
tggtctgggccaaagaggtgtcctcactatctcgctttcgacgtcaacaacgtcctgcac
atggactacgtgatggcgggggcgaacctgttcgcgacgatgtacggcatcaaggggtcg
cgcgatcgtgttgccaccgccgaagtgctcgcccacgtcaaggtgcctgagtacgtgccg
cggtccggcatcaccatccacgtctcggaccaggagttgcagaatgcggcaactggctcc
atggacgatgacaagctggaagaagtgaagaacaccctctcgtcgttggacaccctcaac
aactttaggatggtgcccatcgagtttgagaaggacgacgatgcgaatttccacatggac
ttcattgtcgccgcctcgaacctgcgcgccgagaactacgacatcagccctgccgacagg
cacaagagcaaactgatcgcgggcaagatcatcccggccatcgccacgaccacggcggcc
gtggtggggctcgtgtgcctggagctctacaagatcgtcaacggcaacaagaagctcgag
tcgttcaagaacggcttcatgaacttggcgctgccgttcttcggcttctccgagcccatc
gctgcgcccaagcacgtgtactacgacacagagtggagcctctgggaccgctttgaggtg
aacggcatccaagagaatggagaggagatgacactcaaagaattcacggcctactttttg
gagaagcatgagctgaagatcatgatgctgtcgcaaggcgtctccatgctctactcgttc
ttcatgggccaggccaagctcaaggagcgcctggaccagaagatgactgaaattgtcacc
aaagtgtcgaagaagaagataggcaagcatgtgaaggcactggtctttgagctgtgctgc
aatgacaccaacaacgaggacttggaggtcccttacgtcaagtacacattccgctaa
DBGET
integrated database retrieval system
