KEGG   Petromyzon marinus (sea lamprey): 116947495
Entry
116947495         CDS       T09614                                 
Name
(RefSeq) lysine-specific demethylase 5D-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pmrn01009]
    116947495
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmrn03036]
    116947495
Enzymes [BR:pmrn01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     116947495
Protein phosphatases and associated proteins [BR:pmrn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116947495
Chromosome and associated proteins [BR:pmrn03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116947495
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD
Other DBs
NCBI-GeneID: 116947495
NCBI-ProteinID: XP_032819196
UniProt: A0AAJ7TLT1
LinkDB
Position
30:4657025..4698516
AA seq 1585 aa
MGSGGGEEFVPPPECPVFQPTWEEFGDPLAYIAKIRPIGEKTGICKIRPPPEWQPPFAVD
VDNFRFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGSTLKIPILERKLLDLYMLSKVV
AEEGGFEIVCKDRKWSRVAAKMGYMTGKAVGSLLRVHYERILYPHNLFQSGVSLSTIAQS
LNQKTPIAQAVAEFNYNECIAKPEYEPDEKDQEYKPHSIPLRQSLQHGKMNCAGRRANRM
KTEPDPIDADVSSNSELRKLQIFGAGPKMAGLGLLTGKDRNGKESEGGERGLDDVKALPS
MDIQCPEPEPEPQTAIIPEKVPSMKDSKMELKPVQLKEADIIANVDLYECLVCGRGDDEA
KLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAQVMGWCSGSDGIIPSNSSYECSKP
QEAFGFEQAKRVYTLRSFGEMADVFKSDYFNMPVHMVPTELVEKEFWRLVSCIEEDVSVE
YGADVQAKEYGSGFPVKNGKKKLSKEEEEYTSSGWNLNNMPVLPQSLLGHIDGDISGMKV
PWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPAYAAESLENVMRTLAPELFLA
QPDLLHQLVTIMNPNILMAHDVPVVRTNQCPGEFVVTFPRAYHSGFNQGYNFAEAVNFCT
ADWLPMGRRCVEHYRLMRRYCVFSHEELLCRMACETEGLALPMASAIGRELEIAIDEERK
LRREAWEMGVSKSEPFEFELLADDERQCHFCKTTCYLSAIACPCCPGRLVCLYHIRDLCR
CPTQHKILRYRYTLDELPPMLHKLKSRAEIFDAWAEKVRRALEEENGKKSDLSALKALLE
ESETHDFPESSLRQNLMLLVLEADQCASMAQDLMNSRNCVRDKSGATEEQVMLSLEEFKT
FVNRLEKLPCTVNYMNEIKELLERVEGFRDAVQLLLVAEDKPDLVRMQELLKEAEHLAPV
HLPEKEQLEQRVQRERWLEEVHTALASSLSSQDQGLSEKEAMGGGVSCLNIEVLRRLIDS
AMPLGAEPVMDQAVAELQEILTVAESWEDRARACLQARPRMVRSTLESIVAEAHGVPVHL
PTVQALKVSLQQADDWTADLEKIQAGDHYPYCSVLERMVSQGRCIPVQLDALSQLEGWLE
AASIWQRRAARTFLRRNSCCTLLEVLNPKTCAGDAEKGNECGDNKRTPSQGTDPSFVDTY
RSAEREEVEAMRRMREASRASGPPPEGGTTTPCGACGHGDAGLVRQCHQCRAPCHHGCVA
PTHRRAGARALCTRCVRSKRPQMATVLNLLVGLQGLPVRLPEGEALQCLAERAMGWQDRV
HQALSQGEVVRALEKLKSQPSSHKVAHNTKSRTTIGQKENPNNGSCGTLANVSSEHGGND
DPTYDLQPLTSTSCTELAQSSVCSSQSSRSQQQFHSLLLPPTILAQLEDLLMQGDLIEVS
LQETRLLWRLLSSPSSSADQDREHENEALNTEGEYRDDKTCKRKPESEEVCKEERNAADR
PADGRKRTKVEKDEGADSGAEFSAASSEHEAQSPSSREGEERPGGGVRFREIGDKLERAR
GGAAGAVVVGLENVAESKGRPQDEV
NT seq 4758 nt   +upstreamnt  +downstreamnt
atgggcagcggcggcggagaggagttcgtgccaccgccggagtgcccagttttccaaccg
acgtgggaggaattcggggacccgctggcttacatagcaaagattcgccccattggcgag
aagacgggcatctgtaagatacggccgcctccggagtggcagcctccgtttgctgtggat
gttgataattttcgtttcacgccaagaatacagagattgaatgaactagaggcccaaacg
agagtgaagctaaactttctggatcagatagcaaaattctgggagctgcaaggttctact
ttgaagattcccattttggagcgaaagctgttggacctctacatgctgagcaaggtggtg
gcagaggagggaggctttgagattgtgtgcaaagacaggaaatggtcacgcgtggcagca
aagatgggatacatgacgggaaaggctgtgggctcactgcttcgtgtgcactacgagcga
atcctctacccccacaaccttttccaatctggcgtgagcctctcgacaatagcacagagc
ctcaatcagaaaacaccaatcgctcaggctgttgcagaattcaattacaatgagtgcatt
gcgaagccagagtatgagccggatgagaaagaccaagaatataaaccacacagcatcccc
ctgaggcagtcgttgcaacatggaaagatgaactgtgccgggcgacgtgcaaaccgcatg
aaaacagagcccgatccgattgacgctgacgtgagctccaattcggagctgcggaaactt
caaatctttggggcaggtcccaaaatggcaggcctgggcctgttaactggaaaagatcga
aatggaaaggaaagtgaaggtggagagcgaggcctggatgatgtgaaagctctaccttcc
atggacatccagtgtcctgaacctgaacctgaaccacagactgccatcatcccagaaaag
gtgccttctatgaaggattccaaaatggagctcaagccagtgcagcttaaagaagctgat
ataattgcgaatgtcgacctgtacgaatgcctggtgtgcgggcgaggggacgatgaagct
aaactgctcctgtgcgatggctgtgacgacagctaccacaccttctgcctcattccaccc
ctgcaggatgtccctaagggtgactggaggtgccctaagtgtgttgctcaggtgatgggc
tggtgcagtgggagtgatggcataatccctagcaacagctcttacgaatgtagcaaacct
caggaggcatttggatttgaacaggcaaagagggtgtacaccttgcgcagtttcggagag
atggcggatgtatttaaatcggactacttcaacatgcctgttcacatggtgcctaccgaa
cttgtggagaaagagttctggaggctggtcagctgcattgaggaggacgtgagtgtggag
tatggggccgacgtgcaggccaaggagtacggcagcggttttcctgttaagaatgggaaa
aagaaattatccaaggaggaggaggagtacaccagcagcgggtggaacctcaacaacatg
ccagtcttgccccagtcattgctgggtcacatcgacggggacatatctggcatgaaggtg
ccctggctgtatgtgggcatgtgtttctcttccttctgctggcacatcgaggaccactgg
agctactccattaactatttgcactggggagagccaaagacatggtatggtgttcctgcg
tatgctgccgagtcactggaaaatgttatgaggaccttggctccagagctctttctggca
cagcctgacttgctgcatcagttggtcacgattatgaatcccaacatactaatggcccac
gatgttcccgtggtgaggaccaatcagtgtcccggagagtttgtggtgaccttcccacgg
gcctaccacagcggatttaaccaagggtacaattttgcagaggccgtgaatttctgcact
gcagactggcttccgatgggccgccggtgtgtggagcattatcgcctgatgcggaggtac
tgcgtgttctcgcacgaggagctgctctgcaggatggcgtgtgagacagagggcctggcg
ctgccaatggcatcggcgattggccgcgagctcgagattgccattgacgaggagcggaag
ttgcgcagggaggcctgggaaatgggtgtgagcaagtcggagccgtttgagtttgagttg
ttggcggatgatgagcggcagtgccacttttgcaagacgacctgctacctgtctgctatc
gcgtgcccctgctgcccaggccgcctggtgtgcctctatcacatccgtgacctctgccgt
tgtcccacacagcacaagatactcaggtacagatatacactggacgaactgcccccaatg
ctgcacaagctgaagtctcgagcagagatatttgatgcttgggccgaaaaagtgaggaga
gcattggaagaggaaaatggcaagaagtctgatttgtcggcgttgaaggcactgctggag
gagtctgagacgcacgacttccccgaaagcagcttacggcagaaccttatgcttctcgta
cttgaggcagaccaatgtgcctcaatggcacaggacctgatgaacagtcgcaactgtgtc
cgagacaagagtggtgcaactgaagagcaagtgatgctgagcttggaagagttcaaaaca
tttgtgaatcgtttggaaaaacttccctgcactgtcaactatatgaatgaaataaaggag
ctgctggagagagtggaaggcttcagggatgctgtgcagctgctgttggtggcagaggac
aaaccagatttggtgcggatgcaagagttgctcaaggaggctgaacacttggctcctgtt
catcttcccgagaaagagcagctggaacagagggtgcagagggagcgctggcttgaagag
gtgcacactgcactggcctcttcactgtccagccaagaccaggggctttctgagaaagaa
gcgatgggtggaggcgttagctgcctgaacatagaggtgcttcgcaggttgatagacagt
gccatgccactgggagctgaacctgtcatggatcaagctgtggctgagctgcaggaaatt
ctgaccgtggcagagagttgggaggatcgggcccgtgcttgcctgcaggccaggcctagg
atggtgagaagtacccttgagtccattgttgctgaggctcatggggtaccagttcatctg
ccaactgtgcaagcactgaaggtctccttacagcaagctgacgattggactgctgacctg
gaaaagatccaggcaggagatcactatccatactgcagcgtgctggagaggatggtatcg
caaggccgctgcattcctgtgcagcttgatgcattgtcccagttggaggggtggctggag
gctgccagcatttggcagagacgtgctgcaaggacctttcttaggagaaactcctgctgt
accctcctagaggtgctgaacccaaagacttgtgctggtgatgcggagaaagggaacgag
tgcggtgacaacaaaagaactccgtcccaagggactgacccttcttttgtggatacgtac
aggtccgcagagcgcgaggaggtggaggccatgcggcgaatgcgcgaggccagtcgcgct
agcgggcctccaccagaggggggcaccacgacgccatgtggcgcgtgtggccacggtgat
gccgggctggtgaggcagtgccaccagtgccgggcaccctgccaccacggctgtgtggca
ccgactcaccgccgagccggtgccagggcgctgtgcactcgctgtgttcgatccaagcgg
ccgcaaatggccactgtactgaacctcctggttggtctacagggcctgcccgtcaggctg
ccagaaggagaggccctgcagtgcctggcagagcgtgcgatgggctggcaggaccgggtg
catcaagccctgtcccagggggaggttgtgcgggcccttgaaaaactcaagtcccagccc
tcttcccataaagtggcacacaacaccaagtccagaaccaccatcgggcagaaggaaaac
ccaaacaatggatcgtgtggaactctcgctaacgtttcttctgaacacggagggaatgat
gatcccacctatgaccttcagcctttgacttctacctcctgcactgagcttgcccagtct
tcagtgtgcagcagccaaagttccaggtcgcagcagcagtttcattcgctgttgctccct
cccactattctggcacaacttgaggacctgctcatgcagggagatctgattgaagtgtct
ctgcaagagacgcggcttctttggaggttactgtcatcaccctcgtcttccgctgaccag
gacagagagcatgagaatgaagcacttaataccgagggggagtacagagatgacaaaaca
tgcaagaggaaaccggagtcggaggaagtctgcaaagaggaaaggaatgccgcagaccgt
cccgctgacggtcgcaaacgcacaaaagtggagaaggatgaaggggcagactccggcgcg
gagttttccgctgcgtcgagcgagcacgaagcgcagagtcccagttccagggagggggaa
gagcggccgggtggaggagtgaggtttcgggagataggtgacaaactggagcgagcccgc
ggtggtgcggcaggggctgtcgttgtgggcttggaaaatgtggcagaaagcaaagggcga
cctcaagatgaggtgtga

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