Petromyzon marinus (sea lamprey): 116947501
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Entry
116947501 CDS
T09614
Name
(RefSeq) peroxisome proliferator-activated receptor delta-like
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03320
PPAR signaling pathway
pmrn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116947501
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
116947501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116947501
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmrn03310
]
116947501
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116947501
Nuclear receptors [BR:
pmrn03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
116947501
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
FCD
Motif
Other DBs
NCBI-GeneID:
116947501
NCBI-ProteinID:
XP_032819208
UniProt:
A0AAJ7TJN9
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Position
30:5114531..5134125
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AA seq
499 aa
AA seq
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MLTQSCCLSRVHSLRPPAVYLVAVALNRRQHREDPRLQQLARRRRLVFAFVRCFACPKQL
SSDCRSLHVVSTKARERERASRRGALAAIVTTMPVVPPCGDVALRELPSAAPAVAASAAA
TAAASSVPVEAPLSMECRVCGDRASGFHYGVHACEGCKGFFRRTIRMKLEYGNCGLNCKI
QKKNRNKCQFCRFQKCLSVGMSHSAIRFGRMPAAEKERLKAELGATPAGGERSPHDTTLL
GLAHLVYAAYLRNFTLTKEKARAVLTGRSVHSPVVIHDMESLQSAQSTLHGRARDGRAAE
VLVFNRYQHRSVEAIREVTEFAKCIPGFLALNLNDQVTLLKYGVHEAMFTLWSAYMNKDG
ILVAHSNSFVTREFLKSLRQPYSGVIEPKFQFAMRFNTLDLDDADLALFVAAIVLCGDRP
GLSDARSVEDLQDHVLQAFALQLRLGHPHAPRLFARSLQKMADLRQLVTEHADVVQAIRR
DDAGMALHPLLQEIYEDMY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgcagagctgttgtctgtcgcgagtccactcactccgcccgcctgccgtgtac
ctcgtcgcagtcgccctcaatcgtcgacagcaccgcgaagatccgcggcttcaacaactc
gctcggcggcggcgtttggtttttgcttttgtgcgttgcttcgcctgcccaaaacaactt
tcctccgactgccggagtcttcacgtcgtctccacgaaggcgagagagagagaaagggca
agcaggcggggagccttggcggcgatcgtcacgacgatgcccgtggttccgccgtgcggc
gacgtggccctgcgggagctgccctcagcggcccccgccgtcgccgcatccgctgcggca
acggcggcggcgtcctcggtgcccgtggaggcgccgctctccatggagtgccgcgtgtgc
ggggaccgcgcctcgggcttccactacggggtgcacgcgtgcgaaggctgcaaggggttc
ttcaggcgcaccattcgcatgaagctcgagtacgggaactgcggcctcaactgcaagatt
cagaagaagaaccgcaacaagtgccagttctgtcgtttccagaagtgcctgagcgtgggc
atgtcgcacagcgccatccgctttggccgaatgcccgcggccgagaaggagaggctcaag
gcggagctgggcgcgacgccggccggcggggagcggagcccacacgacacgacgctgctg
ggcctcgcgcacctcgtgtacgccgcgtacctgcgcaacttcacgctcaccaaggagaag
gcccgggccgtcctcacgggaaggtccgtgcattcgcccgtggtgatccacgacatggag
tcgctgcagagcgcacagtccacgctgcacggccgcgcgcgggacggccgcgccgccgag
gtcctcgtgttcaaccgctaccagcaccgctcggtcgaggccatccgcgaggtcacggag
ttcgccaagtgcatcccgggcttcctggcgctcaacctcaatgaccaggtgacgctgctc
aagtacggcgtgcacgaggccatgttcacgctgtggtcggcctacatgaacaaggacggc
atcctggtggcgcacagcaacagcttcgtgacgcgcgagttcctcaagtcgctgcggcag
ccgtacagcggcgtcattgagcccaagttccagttcgcgatgcggttcaacacgctcgac
ctggacgacgccgacctcgcgctcttcgtcgccgcgatcgtcctgtgtggtgaccgcccg
gggctgtcggatgcccgcagcgtggaggacctgcaggaccacgtgctgcaggcgttcgcg
ctgcagctgcgcctgggccacccgcacgctccgcgcctcttcgcgcgcagcctccagaag
atggccgatctgcggcagctggtgacggagcacgccgacgtggtgcaagccatccgccga
gacgacgccggcatggccctgcacccgctcctccaggagatctacgaggacatgtactga
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