Petromyzon marinus (sea lamprey): 116947526 Help Entry 116947526         CDS       T09614                                  Symbol HCFC1 Name (RefSeq) host cell factor 1 isoform X1   KO K14966   host cell factor 1 Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn03083   Polycomb repressive complex pmrn04980   Cobalamin transport and metabolism pmrn05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pmrn00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     116947526 (HCFC1)  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     116947526 (HCFC1)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     116947526 (HCFC1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:pmrn01009]     116947526 (HCFC1)   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:pmrn03036]     116947526 (HCFC1)    03029 Mitochondrial biogenesis [BR:pmrn03029]     116947526 (HCFC1) Protein phosphatases and associated proteins [BR:pmrn01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      116947526 (HCFC1) Chromosome and associated proteins [BR:pmrn03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      116947526 (HCFC1)    HMT complexes     COMPASS/SET1 complex      116947526 (HCFC1)     MLL-HCF complex      116947526 (HCFC1)    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      116947526 (HCFC1) Mitochondrial biogenesis [BR:pmrn03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     116947526 (HCFC1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_3 Kelch_5 Kelch_4 Kelch_1 fn3 Pur_ac_phosph_N Motif Other DBs NCBI-GeneID:  116947526 NCBI-ProteinID:  XP_032819266 EnsemblRapid:  ENSPMAG00000022070 LinkDB All DBs Position 30:7316166..7353510 Genome browser AA seq 1612 aa AA seqDB search MAAPTLKWKRITGSTGPVPRPRHGHRAVTIKELMVVFGGGNEGIVDELHVYNTATNQWFI PAVRGEIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKPKPPKHG PPPCPRLGHSFSLIGNKCYLFGGLANDSEDPKNNIPRYLNDLYVLELKPGSGVMGWDIPV TQGAPPPPRESHTAVVYPQPPEASPGTPTQPALTQPLGRRPMLVIYGGMSGCRLGDLWTL DVDTMTWSQPMMSGIAPLPRSLHSATVIGPKMFVFGGWVPLVLEDAKVATHEKEWKCTSN LACLNLETMTWQSVPTDTSEDNNPRPRAGHCAVSINSRLFVWSGRDGYRKAWNNQVCCKD LWYLETERPPAPGRVQLVRASTDSLEVSWGAVSTADAYLLQLQKYDIPPPAGATPVQAPA GVSAMDQASAATAAAAAAMAGDKSPSHAATAPLMAAGIPASPMPQMATTGGIRLLGASAA GGMGAANAQGTTVVRVQTTQGASASSSPIFTVTRKPTTPGITVSALPTTVSGTPQMSGMA ALAAAAAATQKIPAGASSLGATTTTLAAGSTGIPGTIKVPPGTVVRHSLQVNAPATSMLK SAIAQVSSPGTVSGTSGRPIITVHKSGTISVMPQAQVVTTMIGGVTKTITLVKSPLSVAG GGTLLSNLGSLVTLMQTKPVQSGVVTSQASSLAHFIQTKGTLPPGATIVKLVTSADGKPA TLITTSQAGGMTGTAQILNIGAMAGHTGTVVGKPGGATIIKTIPMSALMSQAGATGGTQT GGMKSPITYITTKVMTSGTGAPGKIITAMPKLGSTQSGVTQVLLRGTGPAGTILRAVTPM SAATMIGGVRLVSPATVTAGKPALTTLVVKGTTGMTTLGTVTGALSTQTAAGVTCVPVPA ALATPVTTLATIAALSSQVAGVAGPSAPNVTLTHVTSTTAVPATSINQPPMLAQQLVKPQ TVAVSVVPVAQPPAEVVAPPECKSPPHETSETNTTNTSTTTTASMDPNQVQPPPTGEGGI PESVHGETATAGTTNTATNTVSAAQPRAVTNVTQSTPAPGPAISSVASLHLQTIASTSDQ AASSETAATTSNSGGGGEAAVAATVSATTTTATAATATVTVAAAVATPVAPKASEAAPQP AQTVNTAVNPPASSNVAPVPATVAAVVVAPPQPPSSSAPSAPAVAATAITMTATTATVTI KVAVPAPLPTTATILPPTIAVPASVSTPACLSSAETATAALQPASHAGSLLPSKIEPLAP SDALAPADSLNDPAPESNHFPVLAGLAPSSTLLTPPVPTVVPTVPVLPTVPILPTVPILP TVPIVSTVPASPAKLQAATVLAQVANNVPPSPTIVTIAKPEVVEAAPKPLAKKESAPWFD VGIFKVTNTVVTRYHLPPDDSSMEDGDASSGILDHSSLKLQSLQPGTAYKFRVAGVNALG RGSFSEISAFKTCLPGFPGAPSAIKISKTPEGAHLTWEPPALKFGRILEYAVYLAVKRPN QPPAQAAGDGKTGAPAAAAQLAFARVYCGAEPSCLVANASLAGAHLDTGAKPAIIFRISA RNQKGYGPATQVRWLQDAGKDAPGSKPMAKRPITSPETKTPMGLKKPKQEAV NT seq 4839 nt NT seq  +upstreamnt  +downstreamnt atggcggctcccacgctcaagtggaagcggatcactggctcgacgggacccgtgccgcgg ccgcgccacggccaccgcgccgtcactatcaaggagctcatggtggtgttcggcggtggc aacgaaggcatcgtggacgagctgcacgtctacaacaccgcaacaaaccaatggttcatc ccagcagtgcgtggcgagatcccaccgggctgcgcagcgtacggcttcgtgtgcgatggc acacggctgcttgtgttcggcggcatggtggagtacgggaagtacagcaacgacctgtac gagctgcaggcgagccgctgggaatggaagcgcctaaaaccgaaacccccgaagcacggg ccgcccccgtgtccccgactgggccacagcttctcgctcatcggcaacaagtgttatctt tttgggggtcttgccaacgatagcgaggaccccaagaacaacattcccaggtatctgaac gacttgtacgtgctggagctgaagccgggctcgggggtgatgggctgggacatccccgtg acacagggtgccccgccgccccctcgcgagtcccacacggccgtcgtctacccccagccc cctgaggcctcccctggaaccccgacacaaccggcactcacccagccgctgggacgtcgg cccatgctcgtcatctacggaggcatgagcgggtgccgcctcggagatctgtggacgctc gatgttgacacaatgacctggagccagccaatgatgtcgggcattgctcctctccctcgc agtcttcactctgccacagtcatcggacccaaaatgttcgtgtttggaggatgggtgccc cttgtattggaagacgcaaaagtagcgacacatgagaaggaatggaaatgcaccagcaac cttgcctgcttaaatctggaaacgatgacctggcagtcagtgccgactgacacgtctgag gataacaacccgcgcccgcgcgctggccactgtgccgtgtccatcaactcacgcctgttt gtctggagcggccgagatggctaccgcaaggcctggaacaaccaggtgtgctgcaaggac ctgtggtacctcgagacagagaggccgccggcgccgggtcgtgtgcagctggtgcgcgcc agcacggactcgctggaggtgagctggggcgccgtcagcacggctgacgcgtacctcctg cagctgcagaagtatgacatccccccgccagccggcgccaccccagtgcaggcccctgca ggcgtcagcgccatggaccaagcctctgcagctaccgctgccgctgccgccgccatggcc ggcgacaaaagcccctcgcacgctgccacggcgccacttatggctgctggcatccccgct agccccatgccacagatggctacgaccggaggcatccgtctgttgggcgcatcggcggcc ggaggaatgggggcagccaacgctcaaggaacgaccgtggtgcgggtgcagaccacgcag ggagccagtgcatcctcttctccgatcttcaccgtcacacgcaagcctaccaccccgggc atcaccgtttccgccctacccacgaccgtttctggcacgccacagatgagtggcatggca gcgcttgctgctgcggccgccgccacccaaaagatccctgcaggggcctcttcgttgggg gccaccacaaccacactcgcagctggatccacaggcatcccaggcaccattaaagttcct cctggcactgttgtgcgtcattcccttcaggtcaacgctcctgcgacctccatgctgaag tcggccatcgcccaggtgtcatcacccggaacggtgtcggggacctcgggcaggcccatc atcaccgtgcacaagtccggcaccatctcggtaatgccgcaggcgcaggtggtcaccacc atgatcggaggcgtcaccaagaccatcaccctcgtcaagagccccctgtctgtggctggg ggcggcacactgctctccaatctgggctctctggtgacgctgatgcagactaagcctgtg cagtctggggttgtcacttcgcaggcgagctctctcgcccacttcattcagaccaagggc accctgcctccgggcgctaccatcgtgaagctggtgacatcggcggatggcaagcctgcc acactcatcaccacctcgcaggcgggtggcatgactggcacggcacagatcctcaacatc ggtgccatggccggccacacgggcaccgtcgtgggcaagcccggcggtgccactatcatc aagaccatcccaatgtcggcgctcatgagccaggctggggctacaggtggaactcaaaca ggtggaatgaagtcccccatcacctacatcaccactaaggtcatgacctctggaaccgga gctccaggaaagattatcacagccatgcccaagctaggcagcacccagtccggagtcaca caggtgctgctgcgtgggacaggccctgccggtaccatcctgcgcgccgtcactcccatg tcggccgccaccatgattggaggggtgcgtctggtttcccctgcaaccgtcactgcaggg aagcctgcccttaccacactggtcgtcaagggcaccacaggcatgacgacactgggcaca gttaccggtgccctcagcacacagactgcggctggtgtgacgtgcgtccccgtcccggcc gcgctggcgacgcctgtcacgacgctggccaccatcgccgccctctcgtctcaggtggct ggcgtggcggggccgtcggcgcccaacgtaaccctcacccatgtcaccagcaccacggcc gtgcctgccacatccatcaaccagccgccgatgttggcacagcagcttgtcaagccacag accgtggctgtgtcagttgtcccggttgcccagcccccagcagaggtggttgcaccaccc gagtgcaaaagcccgccgcacgagacgtcggagaccaacaccaccaacacgtcaaccaca accacagccagcatggaccccaaccaggttcagcctccccctaccggcgagggtggtatt ccggagagcgtgcacggggagaccgccacagccggcaccaccaacacggccaccaacacc gtgtcagccgcccagccccgcgccgtcaccaacgtcacgcagtcaacgcccgccccgggg cccgccatctcgagcgttgcatcgttacacctgcagacgatcgcatccacttcggaccaa gcggctagttcagagactgcagccaccacctccaacagcggtggtggtggggaggcagca gtagcagccacagtttcggcgacaacaacaacagcgacagcagcgacggcaacggtgaca gtagcagcagcagtcgcgaccccagtagcaccaaaggcaagcgaggccgccccacaaccc gcacagacggtgaacactgccgtgaatccaccggcaagcagtaatgtggccccggtgcca gcaacagtagcagcagtagtagtagctccaccacagcccccttcatcctcggcaccatca gcccctgctgttgccgccaccgccattaccatgactgcaaccactgccactgtgaccatc aaggtggccgtcccggcaccgctccccacgaccgccacaatcctgcccccgacaatcgcg gtaccagcgtcggtcagcacccccgcgtgcctgtccagcgccgagacggcaaccgccgcc cttcagccagcgtcgcacgcaggttcgctactgccctccaagatcgaacctctagcacca tcagatgcgctggccccagctgacagcctcaacgaccccgctccggagtcgaaccacttc ccagtgcttgcaggccttgctccgtccagcacacttctcacccctccggtgcccaccgtc gtgcccaccgtgcctgttttgcccaccgtgcccatcctacccaccgtgcccatcttaccc accgtacccatcgtgtccactgtgcccgcgagccccgccaagctgcaggcggccaccgtg ctggcccaggtggcaaacaacgtcccgccaagtcctactattgtcactatagcgaagccg gaggtggttgaggctgcgcctaaaccgcttgccaagaaggagtctgcgccctggtttgac gtgggcatcttcaaagtgaccaacaccgtggtgactcgctaccacctgcctcctgacgac agcagcatggaggacggtgacgcgtcgagtggcatccttgaccacagctctctcaagctg cagtcactgcagcccggcacggcctacaagttccgtgtggccggcgtcaacgccctcggc cgcggttccttcagcgagatttccgccttcaagacctgcctgccgggcttccctggggcg ccctccgctatcaaaatcagcaagacccccgagggagcgcacctgacgtgggagccgccg gccctgaagttcggccgcatcctcgagtacgctgtctacctggcggtgaagcggcccaac cagccccccgcgcaagcggccggtgacggcaagaccggcgccccggccgccgccgcccag ctggcgtttgcgcgcgtgtactgcggcgccgagccgtcgtgcctcgtggcaaacgccagc ctggccggcgcgcacctcgacacgggagccaagcccgccatcatcttccgcatctcggcg cgcaaccagaaaggctacggccccgccacacaagtgcggtggctgcaagatgctggcaaa gatgccccaggaagcaagccaatggcaaagcgacccatcacatcgccagaaaccaaaacc ccgatgggcttgaagaaacccaaacaggaagctgtgtaa

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