Petromyzon marinus (sea lamprey): 116947528
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Entry
116947528 CDS
T09614
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116947528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116947528
Membrane trafficking [BR:
pmrn04131
]
Autophagy
Other autophagy associated proteins
Others
116947528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
116947528
NCBI-ProteinID:
XP_032819271
UniProt:
A0AAJ7TLY0
LinkDB
All DBs
Position
30:complement(7354145..7373177)
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AA seq
370 aa
AA seq
DB search
MFFWGGGGSPAQQQRGVNSVRFNQDHSLFCCAMETGVKVFNVDPLAQKAHIDQEQVGSVG
LAEVLRRSNLIAIVGGGSLPRFAENSVLIWDDARGGTPEQDKLVLDFTFTQPVLAVRMRH
DAISVVLRRKIHVFSFPDNPRETSQFDTRDNPLGLCELSTSLERSLLVFPGLKSGFLQMV
DISALKGAPKRPGLGPNESGVTVKAHESGLACIALDSTASRVATASHKGTLIRIYDTTNG
DRTMELRRGADSAQLYCINFSQDASFLCASSDKGTVHIFALKQTKLNRRSALARVGRKVS
PALGEYAESQWSLASFTVPAETACACAFGKGNSIIAVCLDGTFHKYVFTLEGSCKREAFD
VYLDLENDDF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctggggagggggcggctcccccgcccaacagcagcgaggcgtgaacagcgtg
agattcaaccaggatcacagtctcttctgctgcgcaatggagaccggagtaaaggttttc
aatgtggacccactggcacagaaggcacatatcgaccaggagcaggtgggcagcgtgggg
ctcgccgaggtgctgcggcgctcaaacctcatcgcaatcgtcgggggcggcagcctgcca
cgcttcgccgaaaactccgtgctgatctgggacgacgcgcgtggcgggacccccgagcag
gacaaactcgtgctggacttcaccttcacgcagcccgtgctggctgtgcgcatgcgccac
gacgcaatatcggttgtgctccggagaaagatccacgttttctccttcccagacaatccc
cgggaaacctcacaatttgacacaagggacaatccactgggcctgtgcgagctgtctacg
tcactcgagcggagtctgctcgtgttccccgggctcaagagtggcttcctgcagatggtg
gatatttctgctctgaagggagccccaaagcgacctggcctggggcccaacgagagcggt
gtgacggtgaaagcccacgagagtgggctggcgtgcatcgcgctcgactccacggccagc
agggtggccaccgcctctcacaagggaacgctgatccgtatctacgacacgacaaacggc
gacagaaccatggagctcaggagaggcgccgactcggctcaactctactgcatcaacttc
agccaggatgcgtccttcctgtgcgcgtccagcgacaagggcacggtgcacatcttcgcg
ctgaaacagaccaaactgaaccgtcgctccgcgctagcccgcgtgggccgcaaggttagc
ccggcgctgggagagtacgccgagtcacagtggagcctcgcgagcttcaccgtgcctgcc
gagacggcgtgcgcctgcgctttcggcaagggcaactccatcatcgctgtgtgcctggac
gggacatttcacaaatacgtcttcacgctcgagggcagctgcaagagggaagcctttgat
gtctacctggacctggagaatgatgatttctaa
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