Petromyzon marinus (sea lamprey): 116947589
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Entry
116947589 CDS
T09614
Symbol
CXXC1
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116947589 (CXXC1)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116947589 (CXXC1)
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
116947589 (CXXC1)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
116947589 (CXXC1)
COMPASS/SET1 complex (yeast)
116947589 (CXXC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
DUF2116
PHD_2
Motif
Other DBs
NCBI-GeneID:
116947589
NCBI-ProteinID:
XP_032819407
UniProt:
A0AAJ7TMT8
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All DBs
Position
30:9763223..9820565
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AA seq
659 aa
AA seq
DB search
MRGEGPGVKSWFGSPGEDDSRDAGCRGGGQEGSRVRESSCPRSMESNSTESDVEPMSGAF
NKDGAGPGDANRRRGDGVGDHEVRGSRPSGVGGGAGGGRAPPNGGVAPVGGRTPLETEPA
VYCVCRKPDTNRFMIGCDKCNEWFHGDCIDITQKIAKAIKQWYCDMCRAKDPSLAIRYRQ
KKIKDKSRDAARDYSAEYDGNCSSERRKQLKRSVRMCGECEACCRTDDCGHCDFCRDMKK
FGGPNKIRQKCRLRQCIVRSRKLLRVRDDHGGSSREGAPRGAGLGSSDSDALLSYHDYAA
SPRADQFPWSSGKEDSQDHSLFRKRAVKLKHVQKRERRYEKQNRSERHRDKARHRLRVRH
SERGGPEARETPRQRQCLGPGCTQAVRPTSKYCSHECGMKLAANRIYEILPQRIQEWQAS
PCVAEELGKRLLEGVRREQHTARLRLAHMDRRFLELEAVIAQAKQQSVCEDEEVTDGDNE
EADLQIFCVSCGHPINPKTALKHMERCYAKYESQTSFGSMYPTKIEGATRLFCDVYNTQS
KTYCKRLQVLCPEHSRDPKVSVDEVCGCPLVRDVFSPTGDFCRLPKRRCNKHYCWEKLRR
AEVDLERVRVWYKLDELFEQERNVRTAMANRAGLLALMLHQTIQHEPHTTDLRNSTKET
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtgagggccccggcgttaaaagttggtttggttcaccaggtgaggacgactcg
agagacgcaggttgcaggggtggaggtcaggaggggtcacgcgtccgtgagagcagctgc
ccccgcagcatggagagcaacagcacggagagcgatgtggagccgatgagtggcgccttc
aacaaggatggtgctgggccaggtgacgccaatcgacggcgaggagatggggtgggagac
cacgaggttcgggggtcccggcctagcggggtgggtggcggggcagggggtggcagggcc
ccacccaatggaggggttgctccggtgggggggcggaccccccttgagacggagccggct
gtatactgcgtgtgccgcaagccagacacgaaccgcttcatgataggctgtgacaagtgc
aatgagtggttccacggcgactgcatcgacatcacgcagaagatcgccaaggccatcaag
cagtggtactgcgacatgtgccgcgccaaggacccgtcgcttgccatccgctaccgccag
aagaagatcaaggacaagagccgggatgcagcgcgtgactattcggccgaatacgacggc
aactgcagctcggagagacggaagcaactgaagcgctcggtgcgcatgtgtggcgaatgc
gaggcgtgctgccgcaccgacgactgtggccactgcgacttttgccgggacatgaagaag
tttggtggccccaacaagatccggcagaagtgccggctccggcagtgcatcgtgcgctcc
aggaagctgctgcgcgtgcgcgatgaccacggcggctcaagccgtgagggggcgccacgc
ggcgccggcctcggctcctccgattcggacgcgctgctctcctaccacgactacgccgcc
tcgccccgcgccgaccagttcccgtggagcagtgggaaggaggactcgcaggatcacagc
ttgttccgtaagcgcgccgtgaagctcaagcacgtgcagaagcgcgagcgccgctacgag
aagcagaaccgctcggagcgccaccgggacaaggcccggcacaggctgcgcgtgcggcac
agcgagcgcggcgggcccgaggcacgcgagaccccgcgccagcgccagtgcctgggtccc
ggctgcacgcaggccgtgaggcccacctccaagtactgcagccacgagtgcggcatgaag
ctcgcggccaaccgtatctacgagatcctgccacagcgtatccaggagtggcaggcgagc
ccgtgcgtggccgaagagctgggcaagcgactgctggagggcgtgcgccgggagcagcac
accgcacgcctgcgcctcgcccacatggaccgccgcttcctcgagctggaggccgtgatc
gcgcaggccaagcagcagagcgtgtgcgaggacgaggaggtgacagatggggacaacgag
gaggcggatctacagatattctgcgtgtcgtgtggccaccccatcaaccccaagacagcg
ctgaaacatatggagcgctgctacgccaagtacgagagccagacgtcgtttggatccatg
tacccaaccaagatcgagggggcgacgcgcctgttctgcgatgtctacaacacgcagagc
aagacctactgcaagcggctccaggtcctgtgccccgagcactcccgggacccgaaggtc
tccgtggacgaggtatgcggctgcccgctggtgcgtgacgtgttctcgcccaccggtgac
ttctgccgcctgcccaagcgccgctgcaacaaacactactgctgggagaagctgcggcgc
gccgaggtcgacctggagcgcgtgcgcgtgtggtacaagttggacgagctgtttgagcag
gaacggaacgtgcgcacggcgatggcaaaccgcgccggcctgctggcactcatgctgcac
cagacgatccagcacgaaccgcacaccaccgacctgcgtaactccaccaaggagacctga
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