Petromyzon marinus (sea lamprey): 116947621
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Entry
116947621 CDS
T09614
Name
(RefSeq) decorin-like
KO
K04660
decorin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04350
TGF-beta signaling pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116947621
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116947621
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmrn00535
]
116947621
Proteoglycans [BR:
pmrn00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
116947621
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_5
LRR_9
LRR_14
LRR_6
Motif
Other DBs
NCBI-GeneID:
116947621
NCBI-ProteinID:
XP_032819472
UniProt:
A0AAJ7X3A2
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Position
30:12566774..12580529
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AA seq
394 aa
AA seq
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MASPLVALLLAGALVASSSSSSSSSSSSGWASAAAAVPFRQSQMFDFMAGGSGAVDVEGS
GEIIAVAPSGSARPLPTPRPPPRAAHSCPFGCQCNHKVVQCSDLGLRDVPSNIPLDTTLL
DLQGNKLTEIKEDAFKNQAKLHVLILANNKISKIHPKAFVPLVSLDRLYLSKNQLEEVPP
NLPKHLTELRLYENRISKVPREIFYGLKRLNAIEMGNNPLQNSGIDVGSFKGLDRLTYIR
LSESELSAIPKGLPASLNELHLDGNKITDIGDSDLKGLDHLTRLGLSHNKISSVKEGSLT
HVSGLLELHLDSNQLTRVPPGLADLKFIMAVYLHENKISVVEPDDFCGKGHSPKKSLYSA
ISLYRNPVNYWDIQPLAFRCVTSRVAVQLGNYRK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccgctcgtggccttgcttcttgccggcgcgctggttgcctcctcctcctcg
tcctcctcctcgtcctcctcctccggctgggcgtcagccgccgctgcggtgccattccga
cagtcccagatgtttgacttcatggccggcggcagcggtgcggtggacgtggagggctcg
ggggaaatcatcgccgtcgcgcccagcgggtcggctcggccactcccgactccgcgtccg
cccccccgcgccgcgcactcgtgtcccttcggctgccagtgcaaccacaaagttgtgcag
tgctccgacctcggactccgcgacgtgcccagcaacattccgctggacaccacgctgctc
gatctgcagggcaacaagctgaccgagatcaaagaagacgccttcaagaatcaggccaag
ctgcacgttctcatcctggcgaacaacaagatctccaagatccacccgaaggcgtttgtg
cccctggtgagcctcgaccgcctgtatctgtcaaagaaccaactcgaggaggttccgccc
aacttgcccaaacacctcaccgagctgcgcctctacgagaaccgcatttccaaggtgccc
agggagatcttttacggactcaagcgtctgaacgcgatagagatgggaaacaatcctctg
cagaacagcggaatcgacgtcggctccttcaagggattggatcgcctcacctacatccgt
ctgtctgagagcgagctcagcgccatccccaaagggctaccggcctccctcaacgagctc
cacttggacggcaacaagatcaccgacatcggggacagcgacctcaagggcctggaccac
ctcaccaggctcggtctcagccacaacaagataagttccgtcaaggaggggagtctaacc
cacgtcagcggcctccttgaactgcacctggattcaaatcagctgacccgtgtgccgccg
ggcctggccgatctcaagttcatcatggccgtgtacctgcatgagaacaagatctccgtg
gtggagccggacgacttctgcggaaagggtcacagtcccaagaagtctctgtacagcgcc
atcagcctgtaccggaacccggttaactactgggacatccagccgctcgccttccgctgc
gtgacgagccgcgtcgccgtgcagcttggcaactaccgcaagtag
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