Petromyzon marinus (sea lamprey): 116947691
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Entry
116947691 CDS
T09614
Name
(RefSeq) homeobox protein six1-like isoform X1
KO
K15614
homeobox protein SIX1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116947691
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116947691
BRITE hierarchy
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
116947691
NCBI-ProteinID:
XP_032819590
UniProt:
A0AAJ7X370
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All DBs
Position
31:1198530..1223533
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AA seq
350 aa
AA seq
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MSLLPSFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKTLESHQFSAHNHPKLQQLWLKAHYTEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKDRENSENAHHHHSNAGGGTGGAGGLVLSPLHGGRGLLSSDEERSPAPSPAHSTPN
DTPPRLLGHHPAAAAAAAGHGEHHQHHHHQQQQQQHHQHHHHQQQQQQHHASAYQQQYVG
GTLMPLPVLVSNSAGGALPGPGSLQQQQQQHALQDSSLLQPLSSSLVNIG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtccctactgccgtcgttcggcttcacgcaggagcaggtggcgtgcgtgtgcgaggtg
ctgcagcagggaggcaacatcgagcgcctgggccgcttcctgtggtcgctgcccgcgtgc
gagcacctccacaagaacgagagcgtgctcaaggcgaaggccgtggtggccttccaccgg
ggcaacttccgcgagctctacaagacgctggagagccaccagttctcggcgcacaaccac
cccaagctgcagcagctgtggctcaaggcgcactacacggaggcggagaagctgcgcggg
agacccctgggcgccgtgggcaagtaccgggtgcggcgcaagttcccgctgccgaggacc
atctgggacggcgaggagacgagctactgcttcaaggagaagtctcggggcgtgctgcgc
gagtggtacgcgcacaacccgtacccgtccccgcgcgagaagcgggagctggccgaggcc
acggggctgaccacgacgcaggtcagcaactggttcaagaaccggcgacagcgagaccgc
gccgcggaggccaaggacagagagaacagcgagaacgcgcaccaccaccactccaacgcg
ggagggggcacgggcggcgctggggggctggtgctctcccccctccacgggggccgcggc
ctcctgagctcggacgaggagaggagcccggccccctcccccgcgcactccacccccaac
gacaccccgccccgcctcctgggacatcaccccgcagcagcagcagcagcagcagggcac
ggcgagcaccaccaacatcatcaccatcagcagcagcagcaacagcatcatcagcatcat
catcatcagcagcagcagcagcagcatcacgccagcgcgtaccagcagcagtacgtgggg
ggcactctgatgcctctccccgtcttggtctctaactctgcggggggcgccctgcccggg
ccgggctccctgcagcagcagcagcagcagcacgccctgcaggactcctcactgctgcag
ccgctctcctccagccttgtcaacatcgggtag
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