Petromyzon marinus (sea lamprey): 116947725
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Entry
116947725 CDS
T09614
Name
(RefSeq) metastasis-associated protein MTA1-like isoform X1
KO
K11660
metastasis-associated protein MTA
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116947725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116947725
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116947725
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116947725
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
116947725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
zf-C2H2
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
116947725
NCBI-ProteinID:
XP_032819657
UniProt:
A0AAJ7TKP7
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Position
31:3634342..3663309
Genome browser
AA seq
738 aa
AA seq
DB search
MAANMYRVGDYVFFENSSSNPYLIRRIEELNKTPSGNVEAKVVCFYRRRDISSTLITLAD
KHASGSLLHETEEMEEEMESVDDLSEKQRHQLKHRELFLSRQFESLAATHIRGKCSVTLL
NETEALSSYLEREDCFYYSLVYDPAQKTLLADKGEIRVGPRYQADVPDMLKEGPDFEDDR
DQVKLETKIWDPESPLTDRQIDQFMVIARSVGTFARALDCTSSVRQPSLHMSAAAASRDI
TLFHAMDTLHRSTYEVAKAIGLLVPQGGPVLCRDEMEEWSAAEANLFEEALEKYGKDFTD
IRLDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYNKPNPNQIFT
KQGVPNGSGTAGPGQASGTGRACESCFASQSQQWYSWGPPAMQCRLCSSCWTYWKKYGGL
RLPTRLDGERPGPNRASSGLPLSIQTSEGTLKCAVNGCGKEFRTQGHLYRHCQAVHGLSV
RSQGSSRVALKTRQAFYLHTTKLTRIARRLCCDIFSGRQAARRPFQPINATTIKTECTAR
LPEAAKTPLKVKPVVRKPLESVVKYMEAHPCPVRVAQPLPPRTVSSITPTKVLSVLNHGS
PTILGKRSYDQHNGTDGNTKKRMLMPCRVAKNHTQVKPTVSANRCYLVNGKPFAGSARFV
AKGATPPMAKRRRLNCINAPDDVFFMATADTRKVRKLLVALEMKRSARRPYQRIATRPSS
STQRAVLPVNTEPIVIED
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaacatgtaccgggttggagactatgtcttctttgagaactcttcaagcaac
ccctatctgatcagaaggattgaagaactcaataagacgccgagtggcaacgtggaggcc
aaagtcgtgtgtttctacaggagaagggacatctccagcacgttgatcacgctcgctgat
aaacatgccagtggttctttgttgcatgaaacagaggagatggaggaagaaatggagagc
gtggatgacctttctgagaagcagaggcatcagctcaaacaccgtgagctcttcctttct
cgacagtttgagagcctcgctgccacacacatcagggggaagtgtagtgtgacattgctg
aatgaaactgaagccctgtcatcgtacctggagagggaggactgtttctactactctctg
gtatacgacccagctcagaaaaccttactagccgacaaaggggaaatccgtgttggacca
aggtaccaggcagatgtgccagacatgctgaaagaaggtcccgactttgaagatgacagg
gaccaggtgaagctggaaacaaagatctgggaccccgaaagcccacttacggaccggcag
attgaccagtttatggtgatcgctcgttcggtgggtacatttgcccgtgcactggactgt
acaagctccgtccggcagcccagcctgcatatgagtgccgctgccgcctcccgggacatc
acactgttccacgcgatggacacgcttcaccggagcacgtatgaagtggcgaaggccatc
ggcctgctcgtgccgcagggcgggccagtcttgtgccgcgacgagatggaggagtggtca
gccgctgaggccaacctcttcgaggaggcacttgagaagtatgggaaggacttcaccgac
attcgactcgactttcttccttggaagtcactcaccagcatcatcgaatattactacatg
tggaaaacgacagaccgatacgtgcaacagaagcggctgaaggctgcagaagcggagagc
aaattgaaacaggtgtacatccccaattacaacaaacccaaccccaaccagatattcacc
aagcagggggtgcccaatggctcgggcacagcagggcccggccaggcttcaggaaccggc
agagcctgtgagagctgctttgcatcgcagtcacagcagtggtactcgtggggcccgcct
gctatgcagtgccgcctgtgctcctcgtgttggacctactggaagaagtacggcgggctg
cgtctccctacgcgcctcgacggggagcgcccgggcccgaaccgtgccagcagtggcctg
cccctatccatccagaccagcgaaggcactctcaagtgtgccgtcaacggttgtggaaag
gagttccgcacacagggccacctgtaccgccactgtcaagcagtacacggcctgtcggtg
cgaagccagggcagttcacgcgtggccctcaagacacgccaggccttctacctgcacacg
accaagctgacgcgcatcgcccgccgtctctgttgtgacattttcagcgggcggcaggca
gcgcgtcgccctttccagcccatcaatgcaacgaccatcaagacagagtgcacggcacgt
ttgcctgaagcagccaaaacccccctcaaggtcaagcctgtggttcggaagccattggag
agcgtggtcaagtacatggaggcacacccgtgccccgtgcgtgtggcacagcccctaccg
ccacgcacggtgagcagtatcacccccaccaaggtactctcggtgctcaaccacggctcg
cccaccatcctgggcaagcgtagctacgatcagcacaacggtacggacggcaacacaaag
aagagaatgctgatgccttgtcgtgttgcgaagaatcacactcaagtgaagccaacggtg
tctgcgaaccgctgctacctggtgaacgggaagccgtttgcggggagcgcacgtttcgtg
gccaagggggccactcctcccatggccaagcggcggagactcaactgcatcaatgcacca
gacgacgtctttttcatggccacagcagatacaaggaaagtgcgcaagctgctggtggcg
ctggagatgaaacgctcggcgcggcgtccctaccagcgcatcgccacccgtcccagctcg
tccacccagcgagcagtgctgcccgtgaacacggagcccatcgtcatcgaagactga
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