Petromyzon marinus (sea lamprey): 116947735
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Entry
116947735 CDS
T09614
Name
(RefSeq) calpain-9-like isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116947735
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116947735
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
116947735
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C2: calpain family
116947735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
DUF6761
Motif
Other DBs
NCBI-GeneID:
116947735
NCBI-ProteinID:
XP_032819678
EnsemblRapid:
ENSPMAG00000013879
LinkDB
All DBs
Position
31:complement(4127716..4168736)
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AA seq
712 aa
AA seq
DB search
MLSINTHGNAFVKNAISRDKTLGTPQNPVKFQGQDYMTLKQEALEKGALFEDELFPPLRE
SVGYKELGGKSKKVKVRKLVWKRVKEFVNDPQFIVDGATRTDIEQGELGDCWLLAAIASL
TLSPKLLERVVPEGQSFGDDYAGIFHFKFWQHGEWTDVVVDDRLPTYKDRLVFLHSADGH
EFWSALLEKAYAKLHGSYEALKGGSTSEAMEDFTGGVVEMYDTKEVPENFPQLMQKALER
GSMLGCSIDVTSSAESEARTTTGLVKGHAYSITGFDEVEVRGHKIQLVRVRNPWGQVEWN
GAWSDGGREWQQVSAAERKRLQHQQKDDGEFWMSYRDFIANFHKVEMCNLTPDALDDDTP
GNWTVSMHEGRWLNGCTAGGCRNFPETFWTNPQFRLKLEEEDDDPDEKGQKGCSFIVSVL
QKNRRHQRKLGAQIYTIGFAIYQVPAKLQQQGGHLPKDFFLYNASKARSKQFINLREVSQ
RFRLPPGNYVIVPSTFEPKQEAEFVVRLYAEKKNGSNEMDNSISADIQPEPVVPKQPETE
EDKQIKNAFKVLAGDDMEISAIELQRILNKIVMKHPSLKTKGFSIDTCRGIVALLDKDGS
GKLGYEEFKYLWFKIKKWVDIYKEFDTDRSGTMASYEMRSAIEAAGFKLTTMLHELVTMR
YADENLEINFDGYVACLTRLESMFRIFAAFDKKGTGMINLGLNEWLQLTLYS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgatcaacactcatggcaatgcgttcgtgaagaatgcaatctcgcgggacaag
accctgggcacgcctcagaaccccgtcaagttccaaggccaggattacatgaccctgaag
caggaggccttggagaaaggtgctctgtttgaggatgagctcttccccccgctccgggag
tctgttggctacaaggagctgggggggaaatccaagaaggtcaaggtccggaagctggtg
tggaagagggtgaaggaatttgtgaacgacccgcagtttatcgtcgacggggcgacgagg
acggacatcgagcagggggagctcggagactgctggctgctggctgccattgcgtcgctc
acactgtcgcccaagctgctggagcgcgtcgtgcccgagggccaaagctttggggacgac
tacgccggcatcttccacttcaagttctggcagcatggcgagtggacggacgtggtggtg
gacgatcgcctgcccacgtacaaggaccggctcgtgttcctgcactcggctgacgggcac
gagttctggagcgccctgctcgagaaggcctacgccaagctgcacggctcgtacgaggcc
ctgaaggggggcagcacgtcagaggcgatggaggatttcacgggcggcgtggtggagatg
tacgacactaaggaggtgcccgagaacttccctcagctgatgcagaaggcgctggagcgt
ggatccatgctcggctgctctatcgatgtaacgagcagcgccgagtccgaggctcgaacc
accacgggcctggtgaagggccacgcctactccatcaccggcttcgacgaggtggaggtc
agaggtcacaagatccagctggtgcgggtccgcaacccgtggggccaggtggagtggaac
ggcgcttggagcgatgggggccgcgagtggcagcaggtctccgccgccgagaggaagcga
ctgcagcaccagcagaaggacgacggggagttctggatgtcctacagggacttcatcgcg
aacttccacaaggtggagatgtgcaacctcaccccggacgcgctggacgatgacacgccg
ggcaactggaccgtgtccatgcacgagggacgctggctcaacggctgcacggccggaggc
tgccgcaacttccccgagacgttctggacaaacccgcagttccgtctgaagctggaggag
gaggacgacgaccccgacgagaaggggcagaagggctgctccttcattgtgtcggtgctg
cagaagaaccgccggcaccagcgcaagctcggagcgcagatctacaccatcggcttcgcc
atctaccaggttccagcgaagctgcagcagcagggcggccacctgcccaaggacttcttc
ctctacaacgcctccaaggcgcgcagcaagcagttcatcaacctgcgcgaggtgtcgcag
cgcttccgcctgccgcccggcaactatgtcattgtgccctccaccttcgagccaaagcag
gaggccgagttcgtggtgcgcctctacgccgagaagaagaacgggtccaatgaaatggac
aacagcatatctgccgatatacaaccagagcccgtggttcccaagcagcctgagacggag
gaagacaagcagatcaagaacgccttcaaagtcctcgctggagatgacatggagatcagc
gccatcgagcttcagcgaatcctgaataagatcgtcatgaaacacccttcactgaagaca
aagggcttcagcattgacacttgccgtgggatcgtggcacttctggacaaagacggcagt
ggcaagctgggttacgaggagttcaagtacctgtggtttaagatcaagaagtgggtggac
atctacaaggagttcgacaccgaccgctcgggcacgatggcctcgtacgagatgaggtct
gccatcgaggctgcaggtttcaagcttaccacgatgttgcacgagctagtcaccatgaga
tacgcggacgagaatttggagatcaacttcgacggctacgtggcctgcctcacgcgactc
gagtccatgttcagaatctttgctgcctttgacaagaaagggacgggcatgatcaacctg
ggcctgaatgagtggctgcagctcaccttgtactcgtga
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