Petromyzon marinus (sea lamprey): 116947736
Help
Entry
116947736 CDS
T09614
Name
(RefSeq) calpain-9-like
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116947736
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116947736
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
116947736
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C2: calpain family
116947736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_7
EF-hand_1
CAPN13-like_C_EFh
EF-hand_8
Plasmid_stab_B
Motif
Other DBs
NCBI-GeneID:
116947736
NCBI-ProteinID:
XP_032819682
EnsemblRapid:
ENSPMAG00000003442
LinkDB
All DBs
Position
31:complement(4174246..4211883)
Genome browser
AA seq
739 aa
AA seq
DB search
MAFFSTDNLPFSGFSGIPGFLSGGGPAGAGGAGGRGGNAPAPHNPAAVFGPHEPGAFSNS
AIRNRGAFVCQTKHKAFAELKKECLAKGALFEDAEFPATDSSLGPSFSGQRHQWKRPQEI
VQNPEFIVDGATRTDIKQGALGDCWLLAAIASLTLNDQLLAKVVPPGQNFRDGYAGIFHF
QFWHFGEWMDVFIDDRLPTKNGQLVFVHSADKREFWSALLEKAYSKLNGSYEALKGGSIA
EAMEDFTGGVYELLDLKTAPPDLFRIMCKARQKGSMMGCSIDVTNASESEARTSNGLVKG
HAYSITGVDEVNYRGQKVKLLRIRNPWGEVEWNGAWSDHAPEWKALDQGERNRLQQVMAE
DGEFWMSFDDFMRHFTKMEICNLTPDRVEREGDPRYWTVTVHDGRWLKGCTAGGCRNFPE
TFWTNPQFRLKLHNEDDEADETGSKACSFIVALMQKNMRKQQRNMLTMGYAIYKIPDQTG
PMPKEFFLYNASKARSPSFINLREVSQRFRLPAGEYVIVPSTFEPHQEADFLVRVFAEKP
NRSKESDDKIGAEIDLNDVAKPGTETEDDRKFKTLFGRLAGEDMEISPKELQDMLNKITA
KHGELESTGFSMHACRSIVALTDVDGSGKLGLQEFRILWNKIKKWQAIFRKHDEDLSGTM
SSYEMKNALNAAGFQLNSQMYQLIIMRYTDESMLINFNDYITCLVRLDAMFRAFYTVDKE
KKGFVKMPFDQWMTVAMYA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttctcgacagacaatctccccttctcaggattttcgggcattcctgggttt
ctgtctgggggtggccccgccggcgctggaggtgccggaggtcgaggggggaacgcgccc
gctccgcataatcccgcggccgtgttcggaccccatgagcccggggccttcagcaacagc
gccatcaggaacaggggtgccttcgtgtgccagacgaagcacaaggctttcgcggagctg
aagaaggagtgcctggcgaagggtgccctctttgaggacgcggagttcccggccacggac
tcatccctgggtccgtccttctccggacagcgacaccagtggaagcgaccgcaggagatc
gttcaaaacccggagttcatcgtggacggtgccacaagaacggacatcaaacagggcgct
ctgggtgactgttggctgctggctgccatcgcgtcactgacgctcaacgatcaactgctg
gcgaaggtggtgcccccgggccagaacttcagggatggctacgctggaatattccacttc
cagttctggcactttggcgagtggatggacgtcttcattgatgaccgacttccaacaaag
aacgggcagctcgtgttcgtgcactcggccgacaaacgcgagttctggagcgcgctcctc
gagaaggcctactccaagcttaacggctcttatgaggccctcaagggcggcagcattgcg
gaggccatggaggacttcacggggggcgtgtacgagctgctcgacctgaagaccgctccg
ccggatctgttccgcatcatgtgcaaggcgcggcagaagggctccatgatggggtgctcc
atcgacgtgacgaatgcctccgagtctgaggcgcggacgtcaaatggtctcgtgaagggc
cacgcttattccatcacgggggtcgatgaggtgaactatcgtggtcagaaggtcaagctg
ctccgcatccgcaacccttggggcgaggtggagtggaacggtgcctggagcgatcacgcc
ccggagtggaaggccttggatcagggagagaggaaccgtctgcagcaagtgatggcggag
gatggagagttctggatgtcgttcgacgacttcatgcggcatttcacgaagatggagatc
tgcaacctaaccccggaccgggtggagcgcgagggagacccgcgctactggaccgtcacg
gtgcacgatggtcgctggctcaaggggtgcaccgccggcggctgccgcaacttccccgag
acgttctggaccaacccgcagttccgcctcaagctgcacaacgaggacgacgaggcggac
gagaccggcagcaaggcctgctccttcatcgtagcactcatgcagaagaacatgcgcaag
caacagcgcaacatgctcaccatgggctacgccatctacaagatccccgatcagacgggc
ccgatgcccaaggagttcttcctctacaacgcctccaaggcgcgcagcccgtcgttcatc
aacctgcgcgaggtgtcgcagcgcttccgcctgccggcgggcgagtacgtcatcgtgccc
tccaccttcgagccgcaccaggaggccgacttcctcgtccgcgtcttcgccgagaagccc
aaccgctccaaggaatcggatgacaagatcggagcagaaatagatttgaatgatgtggcc
aagcctggaacggaaaccgaggacgatcgtaaatttaaaaccttgttcggtcggctcgca
ggagaggacatggaaatcagccccaaagagctgcaggacatgctaaacaagatcactgcc
aagcatggcgagctggagtcgaccggcttcagcatgcacgcgtgccgcagcatcgtcgcc
ctcacggacgtggacggctcggggaagctgggtctgcaggagtttcgcatcctgtggaac
aagataaagaagtggcaggccatcttcagaaaacatgacgaagacctgtcgggaacgatg
tcttcctatgagatgaagaacgccctcaacgccgcaggcttccagctgaacagccaaatg
taccagctgatcatcatgcgctacacggatgagagcatgctcatcaacttcaacgactac
atcacctgcctcgtccggctggacgcgatgttccgtgctttttataccgttgacaaggag
aagaaaggcttcgtgaaaatgccatttgaccagtggatgaccgtggctatgtacgcgtga
DBGET
integrated database retrieval system