Petromyzon marinus (sea lamprey): 116947770 Help Entry 116947770         CDS       T09614                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn04140   Autophagy - animal pmrn04148   Efferocytosis pmrn05132   Salmonella infection Brite KEGG Orthology (KO) [BR:pmrn00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     116947770 (VPS39)    04148 Efferocytosis     116947770 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     116947770 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pmrn04131]     116947770 (VPS39) Membrane trafficking [BR:pmrn04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     116947770 (VPS39) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin UTP6_C Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Motif Other DBs NCBI-GeneID:  116947770 NCBI-ProteinID:  XP_032819793 UniProt:  A0AAJ7TKS4 LinkDB All DBs Position 31:complement(5908468..5933682) Genome browser AA seq 873 aa AA seqDB search MHDAYEAVPILEKLPLQIESVACWEEMLLVGTKPGHLLLYKIKGDAGSSRFEVTLEKSSK NFAKKIQQLWVVAQLKILISLSDNVVCVHDLTTFQTITTVNKTKGATLFSCDVQSPTREL RLCVGVRKKLQLFTWKNRDFIELQPDLSLPDFPKSMAWCVDSICVGFKRDYYIVKVDGRG SYKELFPTGKQLEPLVVPLADRKLAVGRDDMTIFIDEEGTTQKHALRWTDVPIAMEHQPP YIIAVLPRYLELRTFEPMLLVQSIELQKPRFIAAGGPNIVYVASSHFVWRLAPVPIATQI EQLLKEKQFDLALQLAQMTNDSDSEKQQRIHHIQNLHAFHLFCQHQFDDSMAKFSTLGTD PSHVIGLYPDLLPADYKKQLQYPSEPPQLSGVELEKGVMALIDYLTQKRNHLVKHMNDAD GGVVAPIVNGVQTIKSRKKLLQIIDTTLLKCYLQTNVALVAPLLRLENNNCHVEESERVL KKAQKYSELIILYERKGMHEKALNVLLQQSQKANSPLKGHERTVQYLQRLGKENMKLIFE FSVWVMKVNPEDGLKIFTEDLPEVEGQPRNEVLQFLESNEKDLAIPYLEYIIYDYMEKGP LFHNRLIELYREKIQEMMKDYLQSLPAGLRQAVVPGSEPGKLGEYRNKLLSFLEISISYQ PGQLITDFPLDGLLEERALLLGRMGNHEQALQIYVHVLRNYPAAEEHCRKYYDRTKEGNK DVYLMLLRLYLCPPDIRELGPLTLGLPKPKPNLPAALLLLEQHYSRVDTTQALNLLPANV QICQVQEFLLRVLEEKAESRRSYQILKSLQLSEHLRVQEQRIFYESVKCVITEEKLCRVC KKKIGSSAFARYPSGVLVHYFCCKNPMECPFDS NT seq 2622 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgcgtacgaggcggtgcccatcctggagaagctgccgctgcagatcgagagc gtcgcctgctgggaggaaatgcttttagtgggaaccaaaccaggtcacctgcttctctac aagattaagggagatgcaggaagttcccgatttgaagtcacgctggaaaagtcgagtaag aactttgccaagaaaatccagcagctctgggtggtcgcgcagttgaaaattctcatcagc ctctctgataatgtggtttgcgtgcatgacctcacaacatttcaaaccatcacaacagtc aacaaaactaaaggggcgacactgttcagctgtgatgttcagtcaccaacgagggagctg cgcctgtgtgtgggcgtccgtaaaaagcttcaacttttcacgtggaaaaatcgcgacttc atagaactgcagcccgatctcagcctgccagacttccccaagtccatggcctggtgcgtg gactccatctgcgtgggattcaagagggactattacattgtcaaggtggacgggcgaggc tcgtacaaggagctcttcccaacggggaaacagctggagccactggtggttcctctggcc gaccgcaagctggcggtggggcgcgacgacatgaccatcttcatcgatgaggagggcacg actcagaagcacgcgctgcgctggaccgacgtccccatcgctatggagcaccagccgccc tacatcatcgcagtgctgccgcgctacctggagttgcggacattcgagccaatgctgctc gtgcagagcattgagctgcagaagcctcgattcatcgccgctggagggcccaacattgtg tacgtggcaagcagccacttcgtctggcgcctggcgcctgtgcccatcgcaacgcagatc gagcagctgctgaaggagaagcagtttgacctggcactacagttggcgcaaatgaccaat gactctgactcagagaagcagcaaagaatccaccacattcagaacctgcacgccttccac ctcttctgccagcaccagtttgacgactccatggccaagttctctaccctgggaacagat ccttcacacgtgatagggctgtacccagatctacttccggctgactacaagaagcagctg caatacccctcggaacctccacagctgtcaggggtggaactggagaagggcgttatggct ctcatcgactacctcacacagaaacgaaaccacctggtgaaacacatgaacgatgcagat ggaggagttgttgcccccatcgtgaacggcgtccagactataaagtccaggaagaagctg ctgcagatcatcgacacgactctgctcaagtgctacctgcagaccaacgtggcgctcgtc gcccccctgctgaggctggagaacaataactgccacgtggaggagagtgaaagagtgctg aagaaggcacagaagtacagcgagctcatcatcctatacgagcgcaagggcatgcacgag aaagcactcaatgtgcttcttcagcagtcccagaaggccaactctcctctcaaggggcat gaacgcacagtgcagtacctgcagaggttaggaaaagaaaacatgaagcttatatttgag ttctcggtctgggtcatgaaagtgaaccctgaggatggattaaagattttcacggaggac ctgccagaggttgaagggcagccaagaaatgaagttttgcagtttctggagtcaaatgaa aaggacctcgccataccgtatctcgagtacattatctacgactacatggagaaagggcct ctcttccacaatcgtctgattgagttgtaccgtgagaagatccaggagatgatgaaggat tacctgcagagcctgccagcaggattgcgccaggcagtggtgcccggctcagagcccgga aagctgggcgagtaccgcaacaagctgctgagcttcctggagatctcgatttcataccaa ccggggcagctcatcaccgacttcccccttgatggtcttttagaggagagggccctgctt ctgggtcgcatgggcaatcacgagcaggctctgcagatctacgtgcacgtgctgcgcaac tatcccgccgcggaagagcactgcagaaagtactatgaccgaaccaaagaaggcaacaaa gatgtgtaccttatgctgctacgcctttacctgtgcccgccggacatccgtgagttggga cccctgaccctcgggcttcctaagcccaagcccaacctgccagccgccctgcttctcctc gagcagcactacagccgcgtggacaccacacaggcactgaacctgttgccagccaacgtg cagatctgccaggtgcaggagttcctgctgcgggttctggaggagaaggcggagagccgc cgctcgtaccagatcctcaagagcctccagctgtcggagcacctgcgggttcaggagcaa aggatcttctacgagagcgttaagtgcgtcatcaccgaggagaagttatgccgcgtttgc aaaaaaaagatcgggagcagtgctttcgcccggtacccgtctggcgtgctggtgcattac ttctgctgcaagaaccccatggaatgcccattcgactcatga

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