Petromyzon marinus (sea lamprey): 116947824
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Entry
116947824 CDS
T09614
Symbol
PARP1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03410
Base excision repair
pmrn04210
Apoptosis
pmrn04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116947824 (PARP1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116947824 (PARP1)
04217 Necroptosis
116947824 (PARP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmrn03032
]
116947824 (PARP1)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116947824 (PARP1)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116947824 (PARP1)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
116947824 (PARP1)
DNA replication proteins [BR:
pmrn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116947824 (PARP1)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116947824 (PARP1)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116947824 (PARP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
WGR
PADR1_N
Zn_ribbon_PADR1
BRCT
BRCT_2
DUF5536
Motif
Other DBs
NCBI-GeneID:
116947824
NCBI-ProteinID:
XP_032819895
UniProt:
A0AAJ7TL60
LinkDB
All DBs
Position
31:complement(7468193..7507014)
Genome browser
AA seq
1022 aa
AA seq
DB search
MADKPFKAEYAKSSRASCKKCGGNIEKDCLRLAVMVQSPRFDGKVPQWHHFQCFWKRARP
LTQADVDGFSELRSADQDRIKKHIEGSADGEGKSSGKANGGAAASNTLPDFLVEYAKSNR
SKCKGCDDKIEKDDVRISRKMINIEKPHLGMIDHWYHTNCFVEHRDTLGFLSTYGANQIG
GFTRLNANDKKAVETLLGTVVVDGKRKAEDQVDEVAKKIKLESMQQKEEEEKMLKKQSNV
IWSFKDGLKSCSDEIDLKELLIANKQAVPSGESAVLERLADGMAFGALLPCAECKDGQLV
CMSDAYRCSGNISGWTKCTFSTKTPKRNEWIIPKEFKDVPFLKKYKYKQRERVFMSAQAT
TSPPRAATVATATVATAATKSGEAPGTSAGAVPGKLLAGKALCLVGKLQKSRDDIKALVE
KLGGKMTSTVPKADFCISTKKEVEKMSKKIAEAQTCNVCVVAEDLLTEASGRPLAELVSA
HRLSTWGAPIKVEQEPTVKTEPVLEVPKEASAKSSKRKSEGQKAEANKLKLTVKGRAAVD
PLSNLVDVAHVLEDRGMIYGAAMSLVDVERGTNSYYKLQLLECDLNRKYWVFRSWGRLGT
TIGGTKLEKMKSREDAVEHFCQLYYDKTGNKWNARNFVKYPNKFYPVETDYGQDDEDIHD
LKAMAGTNSKLAKPIQELLRMIFDIDSMKRTMVEFEIDLCKMPLGKLSRKQIQSAYSVLG
DAQKLVSESGLTSLIQDLSNKFYTLIPHDFGMKKPTLLDNLDYIKMKVDMLDNLMDIEVA
YSLLNPKDETSGGKKDLLDASYEKLHTTIEVLGKDTEEFRVILEYVTNTHAHTHDAYELE
VEEVFKVSRDGEFQRYRPFRELHNRQLLWHGSRMTNYAGILSKGLRIAPKEAPVTGYMFG
KGVYFADMVSKSANYCHTSPSNPTGLILLAEVALGNMHELKQSESITKLPKGTHSVKGVG
KTAPDPKKTVTLNGVQVPIGNPSATGINDTSLLYNEYIVYDVAQVNIKYLLKLNFKYKMQ
LW
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaacccttcaaggcggagtacgcgaagagcagccgcgcttcgtgcaaaaaa
tgcggcggcaacattgagaaggactgcctgcgtctcgcagtcatggtgcagtcacccagg
tttgacggcaaggtgccacagtggcaccatttccagtgcttttggaagcgcgcgcggcct
ctgacgcaggccgatgtggacggcttcagcgagttgcgcagcgctgaccaggaccgcatc
aagaagcacatcgagggcagtgcggacggtgaagggaaaagcagtggcaaggcaaatgga
ggagcagcagcatcaaacaccctcccagattttttggtggagtacgccaagtccaaccgc
agcaagtgcaagggctgtgatgacaagatcgagaaggacgacgtgcgtatctcgcggaag
atgatcaacatcgagaagccgcacctgggcatgattgaccactggtaccacaccaactgt
ttcgtggaacatcgcgacacgctgggcttcctttcgacgtacggcgcaaatcagatcggt
ggcttcacgcggctcaacgccaatgacaagaaggctgtcgagaccctgctcggcactgtc
gtcgtcgatggaaaacgtaaagcagaggaccaggtagatgaggtggccaagaagatcaag
ttggagtccatgcaacagaaggaagaggaagagaagatgctaaagaagcagagcaatgtt
atctggagcttcaaggatggcctgaagagctgcagcgatgagattgacctcaaggagctg
ctgattgccaacaaacaggccgtgccatctggcgagtctgcggtgctggagcgcctggct
gacgggatggcgttcggtgcgcttctgccatgtgcagagtgtaaggacgggcagctcgtg
tgcatgagcgacgcttaccgctgctcggggaacatctccggctggactaagtgcacattc
agcacaaagacacccaagcgcaatgagtggatcatcccaaaggagttcaaggatgtgcca
ttcctgaagaagtataagtacaagcagcgcgagcgcgtcttcatgtccgcccaagctact
accagcccgccgcgtgctgccaccgtcgccactgccaccgtcgccactgctgcaaccaaa
agtggagaagcccccggaaccagcgctggcgcagtcccaggaaaattattggccggcaag
gcgttgtgcttggtggggaagctgcagaagagccgtgatgatatcaaggcactggtggag
aaactgggaggcaagatgaccagcacggtccccaaggccgatttctgcatcagcaccaag
aaggaggtggagaagatgtcaaagaagattgcggaggctcagacgtgcaacgtatgcgtg
gtggcggaggatctgctcacagaggcctcggggcggcccttggctgagctggtgtcggcg
caccgcctgtcgacctggggggcgccaataaaggttgagcaggagccaacggtgaagacc
gagccagtgctggaggttcccaaggaggcgtcggctaagagcagcaaacgaaagtcggag
ggtcagaaggccgaggcgaataagctgaagctgactgtgaagggtcgtgctgccgtggac
cccttgtctaatttggtggatgtggcccacgtgctggaggatcgtggcatgatctacggc
gccgctatgagtctggtggatgttgagaggggaaccaactcgtactacaagctgcagctg
ctggagtgtgacctcaatcgaaaatactgggtgtttcgctcatggggccgcttgggcacg
acgatcggtggcaccaagctggagaagatgaagagccgtgaagacgcggtggagcacttc
tgccagctctactacgacaagaccggcaacaaatggaacgcccgcaacttcgtcaagtac
cccaacaagttctacccggtggagacggactacgggcaggatgatgaggacattcatgat
ctgaaggccatggcgggtaccaactcgaagctggcaaagccgattcaggaactgctgcgt
atgatcttcgacatagacagcatgaagaggaccatggtagagttcgagatcgatctctgc
aagatgcctcttggaaagctgagcaggaagcagatccagagcgcctacagcgtgctgggg
gatgcacagaagctggtgtccgagagtggcctcacctcgctgatccaggacctgtccaac
aagttctacaccctcatcccgcacgacttcggcatgaagaagcccacactcctggacaac
ctcgactatatcaagatgaaggtggacatgctcgacaacctgatggacatcgaagtggca
tacagcctcctgaaccccaaggacgagacgtcgggtggcaagaaagatttgctggatgca
agctacgaaaaactgcacaccactatagaggtgctgggtaaggacacggaggagttccga
gtgatcctggagtatgtcaccaacacgcacgcgcacacgcacgatgcctacgagctcgag
gtggaggaggtgttcaaggtgtcgcgagacggcgagtttcagcgctaccgcccgttccgc
gagcttcacaaccgccagcttctgtggcacggttcccgcatgacgaactacgccggcatc
ctctccaagggcctccgcatcgcgcccaaggaggctccagttacgggctacatgttcggc
aagggtgtctatttcgccgacatggtgtccaagagtgccaactactgccacacaagcccc
agcaaccccaccggcctcatcctgctcgccgaagtcgccctcggaaacatgcatgagctg
aagcaaagcgaatcgattaccaagctgccaaagggaacccacagtgtgaagggtgtgggt
aagacggcgcctgacccgaagaagaccgtgactctcaacggcgtgcaggtgccaattggc
aatccttccgcgacgggcatcaacgacaccagcctgctgtacaacgaatacatcgtttac
gacgtggctcaggtgaacatcaagtacctgctcaaactgaacttcaagtacaagatgcag
ctgtggtag
DBGET
integrated database retrieval system
