Petromyzon marinus (sea lamprey): 116947855
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Entry
116947855 CDS
T09614
Symbol
SNRPD2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116947855 (SNRPD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116947855 (SNRPD2)
03032 DNA replication proteins [BR:
pmrn03032
]
116947855 (SNRPD2)
Spliceosome [BR:
pmrn03041
]
Complex A
U1 snRNP components
Sm proteins
116947855 (SNRPD2)
U2 snRNP components
116947855 (SNRPD2)
Complex B
U1 snRNP components
116947855 (SNRPD2)
U4/U6.U5 tri-snRNP components
116947855 (SNRPD2)
Complex C
U2 snRNP components
116947855 (SNRPD2)
DNA replication proteins [BR:
pmrn03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116947855 (SNRPD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
116947855
NCBI-ProteinID:
XP_032819950
UniProt:
A0AAJ7X3J0
LinkDB
All DBs
Position
31:complement(8537607..8546932)
Genome browser
AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELSKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLARVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIIVLRNPLTSSK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccttaacaaaccgaagagcgagatgacgcccgaggagctgtcgaagcgcgag
gaggaggagttcaacacgggcccgctctccgtgctcacgcagtccgtcaagaacaacaca
caggtcctcatcaactgccgcaacaacaagaagctgctggcgcgagtcaaggccttcgac
aggcactgcaacatggtgctggagaacgtgaaggagatgtggacggaggtgccgaagagc
ggaaagggcaagaagaagtccaagccggtgaacaaggatcgctacatctccaagatgttc
ctccgcggagactcggtcatcatcgtgctcaggaacccgctcacgagcagcaaatga
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