Petromyzon marinus (sea lamprey): 116947907
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Entry
116947907 CDS
T09614
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04517
IgSF CAM signaling
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116947907
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116947907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116947907
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116947907
Intermediate filaments
Intermediate filament-binding proteins
116947907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
RRXRR
PH_11
Motif
Other DBs
NCBI-GeneID:
116947907
NCBI-ProteinID:
XP_032820091
UniProt:
A0AAJ7TL93
LinkDB
All DBs
Position
31:12376966..12462305
Genome browser
AA seq
2421 aa
AA seq
DB search
MSASSPVPESEGGVGGREAGKRACVMLTTVSVGNSSSSNNGNNGNNGRWELNEEDRENEN
STARLYERSRIRALADEREAVQKKTFTKWVNSHLARVSCRIGDLYTDLRDGRMLIKLLEV
LSGETLPKPTRGKMRIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLILGLIWTII
LRFQIQDISVQTEDSKETRSAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAVIHK
HRPDLVDFEKLKKSNAQHNLQHAFNAAEQHLGVTKLLDPEDVSVDQPDEKSIITYVVSFY
HYFSKMKALAVEGKRIGKVLDSAIEADRMVERYESLASELLEWIGRTITALNSRDFPNSL
VGVQQQLHAFSSYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLVAEINR
AWERLEKAEHGRELALRDELIRQEKLEQLARRFDRKAAMRETWLAENQRLVMQDNFGADL
AAVEAATKKHEAIETDMAAYEGRVRAVEGVARELEAERYHEVARVVRRRDGVLQLWRRLQ
ELLAARRTRLEMTLALQRAFHEMLYTGAWMDEMKLRLLSQECGKHLLGVEDLLQKHALVE
ADVAAQADRVKAVNAAALRFAEEVDGYRPCDPEVASERAGQLEASYAELCALCAARRARL
EEARALHLFLWEAEEVEAWVRQVEPLLASEDAGHDLAAVLRLLARHRAFEDELSGRRAQL
QQTLRLGEAAAAALAPRLADAAASEEEKREAERDAQAARARSAELDKLWASLELAASRRA
ERLRASEALHQLLSDSADVEAWARDASLLVAAGGDVGNDEFSTQALARKHRDVVEEIEGY
RPVIDSLQEQAAALPASLAEPAGVREQLRRLEEAYGELAALAAERGRRLQDALALYTIHS
ETAACLLWLDEKSQWLDALDIPEKLEDLEVVQHRFESLEPEMNGLASRVAVVNQLARQLL
GSEHASEDDIKAKQDLLNARWSEFRELAESKKEALQAQLTLQSFQLECHETQAWIREKTR
LIESTQGLGNDLAGVMALQRKLSGMERDLAAIEVKVGDLQGEAERLAQHHPERAGAVRGQ
LADTADVWGALRGTLRAREDSLGEASKLQKFLQDVDDFQAWLSKTQKAVASEDVPSTLPE
AEKLLAQHEAIKNEISNYSEDHRRMREMGEEVTRDQSDPQHVFLRQRLQALHTGWAELHS
MWDNRRALLAACHAYLAFARDARQADGVLSNQEYALSRVEMPATLQSAEAAIKKHEELTT
SMEANDEKVGSVLDTGRKLVGEGNFNADKIQEKMDSISERREKNQAAAADLLGRLRDNRD
LQKFLQDCQELSLWMNEKMLTAQDMSYDEARNLHSKWQKHQAFMAELASNKEWLDKIKKE
GEQLIRDKPETEGIVQEKLSELGTVWDRLESTTQLKAQRLFDANRAELFTQSCADINMWL
AELETQITSEDHGSDLTSVNILLKKQQLLEKQMEVREKEVRELQDQVLVLRQEQRKEGAG
GPGEGGEEEVDGMRASVEGRFKQVTQPLEERRLKLLASKEVHQFTRDLEDEILWVEERLP
LATSTDHGNSLQSVQLLVQKNQNLQKEMAGHEPRVHEVCERGEALAQRGLGEDGAEAGAA
ARRLGELRALWGRLRDEARARSARLHEAHRAQQYYFDVAEAESWMSEQELYMIAEEKVKD
EQSALALVKKHAIMEQGVEDYANVIRQLAETSRSLVADSHPESDRILLRQSQADKQYASL
KDLAEERRGKLAEKHGLFQLSREVEELEQWIAEREVVASSHELGQDYEHVTLLEERFAEF
ARETAATGHERVSGVMAASDVVIAGGNAESAAAAAEWKDTLAEGWAELLELMETRAQMLA
ASRRLHRFVHDAREVLGRVREKQQLLPDELARDLISVESQQRAHAAFETDVQAFGTQVVA
LQESARGLQESYAGDKAEEIRQREQEAVSGWEGLLAACATRRQLLSDTWEKCRFFSAARD
LLLWMEGIERQMEAQEKPRDVSSAELHITNHQDVKAEMDARNDSFVAVVEMGQSLLDRGH
YASDEIQEKLEQLKDKRKGMVLHWEDRAEWLKLMLEVHQFARDAGVAEAWLLAQEPHVTC
QEFGESADEVDELLKRQEAFEKSAGTWEERIALLERLTTLEVREHKRREARLAEEKRQEQ
LERERQEKEEEEEEARRAAEQEEREKELMEQTVQNGIPSDQESPKTNGEDAKEADGSAVP
TAADEVQPATLKEGSLHRKHELDANGKKASSRSWNTVFCKLTDHGLGFYKDNKSAAAGAL
YHNEPPLPLAGAACEVASDYKKRKHVFKLQLADGSEYLFQAKDDDEMNAWIQSICGNGMG
SGSASGVGMGGSASASGLPSGGGDTASLGGGGGEPQQQQQQQSPAAVVLRRKPTSPGSAA
SDTTSPSRKSEKRFSFFGKKK
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtcttctcccgtcccggagagcgagggcggcgttggggggcgcgaggccggc
aagcgcgcctgcgtcatgctcaccaccgtgtcggtgggcaacagcagcagcagcaacaac
ggcaacaacggcaacaacggacgctgggagctgaacgaggaggaccgggagaacgagaac
agcacggcgaggttgtacgagcgctcgcgcatccgcgccctcgcagacgagcgcgaggcc
gtgcagaagaagacgttcaccaagtgggtgaactcgcacctggcgcgcgtctcctgccgc
atcggcgatctctacacggacctccgcgatggacgcatgctcatcaagctgctggaggtg
ctctccggggagacgctgcccaagccgacgcgtggcaagatgcgcatccactgtctggag
aacgtggacaaggcgctgcagttcctcaaagagcagaaggtgcacctggagaacatgggc
tcgcacgacatcgtcgatggcaaccaccgcctcatcctgggcctcatctggaccatcatc
ctgcgattccagatccaggacatcagcgtgcagacggaggacagcaaggagacccgctct
gccaaggacgcgctgctgctatggtgccagatgaagacggcgggctaccccaatgtgaac
gtccacaacttcacgaccagctggagggacggtctggctttcaacgccgtcatccacaag
caccggccggacctggtggacttcgagaagctgaagaagtcgaacgcgcagcacaacctg
cagcacgcgttcaacgcggccgagcagcacctgggggtcaccaaactgctcgaccccgaa
gatgtgagcgtggaccagccggacgagaagtccatcatcacctacgtggtctccttctac
cactacttctccaagatgaaggccctggccgtcgagggcaagcgcatcgggaaggtgctg
gacagcgccatcgaggcggaccgcatggtggagcgctacgagtcgctggcctcagagctc
ctcgagtggatcggccgcaccatcacggcgctcaacagccgcgacttccccaactcactc
gtgggcgtgcagcagcagctgcacgccttcagcagctaccgcaccgtcgagaaaccgccc
aagttcacggagaaaggaaacctggaggttctgctcttcaccatccagagcaagatgagg
gccaacaaccagaaggtgtacacgccgcgcgaggggaagctcgtggcggagatcaacagg
gcctgggagcggctggagaaggcggagcacgggcgcgagctggcgctgcgtgacgagctc
atccgccaggagaaactggagcagctggcgcgccgcttcgaccgcaaggcggcgatgcgc
gagacctggctggcggagaaccagcggctcgtcatgcaggacaacttcggcgcggacctg
gcggcggtggaggcggccacgaagaagcacgaggcgatcgagacggacatggcggcgtac
gaggggcgcgtgcgcgccgtggagggcgtggcgcgcgagctggaggcagagcgctaccac
gaggtggcgcgcgtggtgcggcgccgcgacggggtgctgcagctgtggcgccgcctgcag
gagctgctggcggcgcggcgtacgcgcctggagatgacgctggcgctgcagcgagccttc
cacgagatgctctacaccggcgcctggatggacgagatgaagctgcgcctgctgtcgcag
gagtgtgggaagcacctgctgggcgtggaggacctcctgcagaagcacgccctcgtggag
gccgacgtggccgcgcaggccgaccgcgtgaaggccgtcaacgcggccgccctgcggttc
gccgaggaggtggacggctacaggccgtgcgaccccgaggtggcgagcgagcgagcgggg
cagctggaggcgtcctacgcggagctgtgcgcgctgtgcgcggcacggcgcgcccgcctc
gaggaggctcgcgccctgcacctcttcctgtgggaggccgaggaggtggaggcctgggtg
cggcaggtggagcccctcctcgccagcgaggacgccggccacgacctcgcggccgtgctg
cgcctgctcgctcggcaccgcgcattcgaggacgagctgagcggccgccgggcccagctg
cagcagacgctgcgcctgggcgaggcggccgcggcggcgttggcgccccgcctggccgac
gccgccgcctccgaggaggagaagcgcgaggcggagcgcgacgcgcaggcggcccgcgct
cgctccgccgagctcgacaagctgtgggcctcgctggagctggcggcgtcgcgcagagcc
gagcgcctgcgggcctccgaggcgctgcaccagctgctgtcggactcggccgacgtcgag
gcctgggcccgggatgcgtcgctgctggtggcggccggcggggacgtgggcaacgacgag
ttctccacgcaggcgctcgcgcgcaagcaccgcgacgtcgtggaggagatcgagggatac
aggccggtgatcgactcgctgcaggagcaggcggcggcgctgcccgcgagcctcgcggag
ccggccggcgtgcgggagcagctgcggcgcctggaggaggcgtacggcgagctggcggcg
ctggccgccgagcgcggccgccgcctgcaggacgcgctggcgctctacaccatccacagc
gagacggccgcctgcctgctctggctcgacgagaagagccagtggctcgacgctctcgac
attcccgagaagctggaggacctggaggtcgtccagcaccggtttgagagcctggagccc
gagatgaacggcctggcgtcgcgcgtcgccgtggtcaatcagctggcccggcagctgctg
gggtcggagcacgccagcgaggacgacatcaaggccaagcaggacctcctgaacgccagg
tggagcgagttccgggagctggcggagagcaagaaggaggcgctgcaggcgcagctgacg
ctgcagagcttccagctggagtgccacgagacacaggcgtggatccgcgagaagacgcgt
ctcatcgagtccacgcagggcctgggcaacgacctggccggtgtcatggcgctgcagcga
aagctgtccggcatggagcgagacctggctgccatagaggtgaaggtgggggacctgcag
ggcgaggcggagcggctggcgcagcaccacccggaacgcgccggcgccgtgcgtggccag
ctggccgacacggcggacgtgtggggcgccctgcgcggcacgctgcgcgcacgcgaggac
tccctcggcgaggcctccaagctgcagaagttcctgcaggacgtcgacgacttccaggct
tggctctccaaaacccagaaggccgtggcgtcggaggacgttcccagcaccctccccgag
gctgagaaactcctggcgcagcacgaagcgatcaagaacgagatcagcaactacagcgag
gatcaccggcgcatgcgggagatgggcgaggaggtgacgcgcgaccagagcgacccgcag
cacgtgttcctgcgccagcggctgcaggccctgcacacgggctgggccgagctgcacagc
atgtgggacaaccggcgcgcgctgctggccgcgtgccacgcgtacctcgccttcgcacgc
gacgctcgccaggctgacggcgttcttagcaaccaggaatacgcgctgagccgcgtggag
atgccggcgacgctgcagtccgccgaggcagccatcaagaagcacgaggagctgaccacc
agcatggaggccaatgacgagaaggtcggcagcgtgctggacacggggaggaagctggtc
ggcgaggggaacttcaacgccgacaagatccaagagaagatggattccatcagcgagagg
cgtgagaagaaccaggcagcagcagcagacctcctgggccgtttgagggacaaccgggac
ctacagaagttcttgcaagattgccaggagctgagcctgtggatgaacgagaagatgctg
acggcgcaggacatgtcgtacgacgaggccaggaacctccactccaagtggcagaagcac
caggccttcatggcggagctggcctccaacaaagagtggctggacaagatcaagaaggag
ggggagcaactgatccgggacaagccggagacagagggcatcgtgcaggagaagctctcg
gagctgggcaccgtgtgggaccgcctggagagcaccacgcagctcaaggcccagcggctc
ttcgacgcgaaccgcgccgagctcttcacgcagagctgcgccgacatcaacatgtggctc
gccgagctggagacacagatcacgtccgaggaccacggcagcgacctcaccagcgtcaac
atcctgctcaagaagcagcagctgctggagaagcagatggaggtgcgcgagaaggaggtg
cgcgagctgcaggaccaggtgctcgtgctgcggcaggagcagcgcaaggagggtgcgggg
ggcccgggggagggcggggaggaggaggtggacggcatgcgcgccagcgtggagggccgc
ttcaagcaggtgacgcagccgctggaggagcgccgcctcaagctgctggcgtccaaggag
gttcaccagttcacccgcgacctcgaggacgagatcctctgggtggaggagcggctgcct
ctggccacgtccacggatcacggcaacagcctgcagtcggtgcagctgctcgtccagaag
aaccagaacctgcagaaggagatggcgggtcacgagccgcgcgtgcacgaggtgtgcgag
cgcggcgaggcgctggcgcagcgcggcctgggcgaggacggcgccgaggccggcgccgcg
gcgcgccgcctgggggagctgcgggcgctgtggggccgcctgcgcgacgaggcgcgggca
cggagcgcgcgcctccacgaggcccaccgcgcgcagcagtactacttcgacgtggcggag
gccgagtcgtggatgagcgagcaggagctctacatgatcgccgaggagaaagtgaaggat
gagcagagcgcactggctctggtgaagaagcacgccatcatggagcagggggtggaggat
tacgccaacgtcatccggcagctggccgagaccagccgcagcctggtggcagactcgcac
cccgagagcgaccggatcctgctgcggcagtcgcaggcggacaagcagtacgccagcctc
aaggacctggcggaggagcggcgcgggaaactggccgagaagcacggcctcttccagctg
agccgcgaggtggaggagctggagcagtggatcgccgagcgggaggtggtggcctcctcg
cacgagctgggccaggactacgagcacgtcaccctcctggaggagcggttcgcggagttt
gcgcgggagacggcggcgacgggccacgagcgcgtgagcggcgtcatggcggcctccgac
gtggtcatcgccggcggcaatgccgagtcggcggcggcggccgccgagtggaaggacacg
ttggctgagggctgggccgagctgctcgagctcatggagacgcgggcgcagatgctcgcc
gcctcgcgccggctgcacaggttcgtgcacgacgcgcgcgaggtgctggggcgcgtgcgc
gagaagcagcagctgctgcccgacgagctcgcgcgggacctcatctccgtggagagccag
cagagggcccacgccgccttcgagaccgacgtgcaggccttcggcacgcaggtggtggcg
ctgcaggagtcggcgcgcggcctgcaggagtcgtacgcgggggacaaggcggaggagatc
cgccagagggagcaagaggccgtgagcggctgggaggggctgctggcggcgtgcgccacg
cgccgccagctgctctccgacacgtgggagaagtgccgcttcttcagcgctgcccgcgac
ctcctgctgtggatggagggcattgagaggcagatggaagctcaggagaagccaagggac
gtttcttctgctgagctgcacatcaccaaccaccaggacgtcaaggccgagatggacgcg
cgtaacgacagcttcgtcgccgtggtggagatggggcagtcgctgctcgaccgcgggcac
tacgcctctgacgagattcaggagaagctggagcagcttaaggacaagcggaagggcatg
gtcctgcactgggaggatcgcgccgagtggctcaagctcatgctggaggtgcaccagttt
gcgagggacgccggcgtggcggaggcctggctgctggcgcaggagccgcacgtcacgtgc
caggagtttggggagagcgcagacgaggtggacgagctgctcaagcggcaggaggccttc
gagaagtcggccggcacctgggaggaacgcatcgcgctgctcgagaggctcaccaccctg
gaggttcgcgagcacaagcggcgggaggcgcgcctggcggaggagaagcgccaggagcag
ctggagcgcgagcgccaggagaaggaggaggaggaggaggaggcgcggcgggcggcagag
caggaggagagggaaaaagagttaatggagcagactgtgcagaatggtatcccgtctgat
caagagtccccgaagaccaacggagaggacgcgaaggaggcggatggcagcgccgtccca
acggccgcggacgaggtccagcccgccacgctcaaggagggctccctgcaccgcaaacac
gagctcgatgccaacgggaagaaggcctccagcaggtcctggaacacggtgttctgcaag
ctcacggaccacggcctgggcttctacaaggacaacaagagcgccgccgcgggggctctg
taccacaacgagccccccctgcccctcgccggcgccgcctgcgaggtggcctccgactac
aagaagaggaagcacgtcttcaagctgcagcttgcggacgggagtgaatacctgtttcaa
gccaaggacgacgacgagatgaacgcctggatccagagcatctgtgggaacgggatgggt
tcggggagcgcgagcggcgtggggatggggggcagcgccagcgccagcgggctgcccagc
ggcggcggagacacggccagcctcggcggtggcggtggagagccgcagcagcagcagcag
cagcagtcgcctgccgccgtggtgctgcgccggaaaccgacgtcgccgggatcggccgcc
agcgacacgacgagcccgagccgcaagagcgagaagcgcttcagcttctttgggaagaaa
aagtaa
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integrated database retrieval system
