Petromyzon marinus (sea lamprey): 116947907
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Entry
116947907 CDS
T09614
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116947907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmrn04812
]
116947907
Cytoskeleton proteins [BR:
pmrn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116947907
Intermediate filaments
Intermediate filament-binding proteins
116947907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
RRXRR
Motif
Other DBs
NCBI-GeneID:
116947907
NCBI-ProteinID:
XP_032820091
UniProt:
A0AAJ7TL93
LinkDB
All DBs
Position
31:12376966..12462305
Genome browser
AA seq
2421 aa
AA seq
DB search
MSASSPVPESEGGVGGREAGKRACVMLTTVSVGNSSSSNNGNNGNNGRWELNEEDRENEN
STARLYERSRIRALADEREAVQKKTFTKWVNSHLARVSCRIGDLYTDLRDGRMLIKLLEV
LSGETLPKPTRGKMRIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRLILGLIWTII
LRFQIQDISVQTEDSKETRSAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAVIHK
HRPDLVDFEKLKKSNAQHNLQHAFNAAEQHLGVTKLLDPEDVSVDQPDEKSIITYVVSFY
HYFSKMKALAVEGKRIGKVLDSAIEADRMVERYESLASELLEWIGRTITALNSRDFPNSL
VGVQQQLHAFSSYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLVAEINR
AWERLEKAEHGRELALRDELIRQEKLEQLARRFDRKAAMRETWLAENQRLVMQDNFGADL
AAVEAATKKHEAIETDMAAYEGRVRAVEGVARELEAERYHEVARVVRRRDGVLQLWRRLQ
ELLAARRTRLEMTLALQRAFHEMLYTGAWMDEMKLRLLSQECGKHLLGVEDLLQKHALVE
ADVAAQADRVKAVNAAALRFAEEVDGYRPCDPEVASERAGQLEASYAELCALCAARRARL
EEARALHLFLWEAEEVEAWVRQVEPLLASEDAGHDLAAVLRLLARHRAFEDELSGRRAQL
QQTLRLGEAAAAALAPRLADAAASEEEKREAERDAQAARARSAELDKLWASLELAASRRA
ERLRASEALHQLLSDSADVEAWARDASLLVAAGGDVGNDEFSTQALARKHRDVVEEIEGY
RPVIDSLQEQAAALPASLAEPAGVREQLRRLEEAYGELAALAAERGRRLQDALALYTIHS
ETAACLLWLDEKSQWLDALDIPEKLEDLEVVQHRFESLEPEMNGLASRVAVVNQLARQLL
GSEHASEDDIKAKQDLLNARWSEFRELAESKKEALQAQLTLQSFQLECHETQAWIREKTR
LIESTQGLGNDLAGVMALQRKLSGMERDLAAIEVKVGDLQGEAERLAQHHPERAGAVRGQ
LADTADVWGALRGTLRAREDSLGEASKLQKFLQDVDDFQAWLSKTQKAVASEDVPSTLPE
AEKLLAQHEAIKNEISNYSEDHRRMREMGEEVTRDQSDPQHVFLRQRLQALHTGWAELHS
MWDNRRALLAACHAYLAFARDARQADGVLSNQEYALSRVEMPATLQSAEAAIKKHEELTT
SMEANDEKVGSVLDTGRKLVGEGNFNADKIQEKMDSISERREKNQAAAADLLGRLRDNRD
LQKFLQDCQELSLWMNEKMLTAQDMSYDEARNLHSKWQKHQAFMAELASNKEWLDKIKKE
GEQLIRDKPETEGIVQEKLSELGTVWDRLESTTQLKAQRLFDANRAELFTQSCADINMWL
AELETQITSEDHGSDLTSVNILLKKQQLLEKQMEVREKEVRELQDQVLVLRQEQRKEGAG
GPGEGGEEEVDGMRASVEGRFKQVTQPLEERRLKLLASKEVHQFTRDLEDEILWVEERLP
LATSTDHGNSLQSVQLLVQKNQNLQKEMAGHEPRVHEVCERGEALAQRGLGEDGAEAGAA
ARRLGELRALWGRLRDEARARSARLHEAHRAQQYYFDVAEAESWMSEQELYMIAEEKVKD
EQSALALVKKHAIMEQGVEDYANVIRQLAETSRSLVADSHPESDRILLRQSQADKQYASL
KDLAEERRGKLAEKHGLFQLSREVEELEQWIAEREVVASSHELGQDYEHVTLLEERFAEF
ARETAATGHERVSGVMAASDVVIAGGNAESAAAAAEWKDTLAEGWAELLELMETRAQMLA
ASRRLHRFVHDAREVLGRVREKQQLLPDELARDLISVESQQRAHAAFETDVQAFGTQVVA
LQESARGLQESYAGDKAEEIRQREQEAVSGWEGLLAACATRRQLLSDTWEKCRFFSAARD
LLLWMEGIERQMEAQEKPRDVSSAELHITNHQDVKAEMDARNDSFVAVVEMGQSLLDRGH
YASDEIQEKLEQLKDKRKGMVLHWEDRAEWLKLMLEVHQFARDAGVAEAWLLAQEPHVTC
QEFGESADEVDELLKRQEAFEKSAGTWEERIALLERLTTLEVREHKRREARLAEEKRQEQ
LERERQEKEEEEEEARRAAEQEEREKELMEQTVQNGIPSDQESPKTNGEDAKEADGSAVP
TAADEVQPATLKEGSLHRKHELDANGKKASSRSWNTVFCKLTDHGLGFYKDNKSAAAGAL
YHNEPPLPLAGAACEVASDYKKRKHVFKLQLADGSEYLFQAKDDDEMNAWIQSICGNGMG
SGSASGVGMGGSASASGLPSGGGDTASLGGGGGEPQQQQQQQSPAAVVLRRKPTSPGSAA
SDTTSPSRKSEKRFSFFGKKK
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtcttctcccgtcccggagagcgagggcggcgttggggggcgcgaggccggc
aagcgcgcctgcgtcatgctcaccaccgtgtcggtgggcaacagcagcagcagcaacaac
ggcaacaacggcaacaacggacgctgggagctgaacgaggaggaccgggagaacgagaac
agcacggcgaggttgtacgagcgctcgcgcatccgcgccctcgcagacgagcgcgaggcc
gtgcagaagaagacgttcaccaagtgggtgaactcgcacctggcgcgcgtctcctgccgc
atcggcgatctctacacggacctccgcgatggacgcatgctcatcaagctgctggaggtg
ctctccggggagacgctgcccaagccgacgcgtggcaagatgcgcatccactgtctggag
aacgtggacaaggcgctgcagttcctcaaagagcagaaggtgcacctggagaacatgggc
tcgcacgacatcgtcgatggcaaccaccgcctcatcctgggcctcatctggaccatcatc
ctgcgattccagatccaggacatcagcgtgcagacggaggacagcaaggagacccgctct
gccaaggacgcgctgctgctatggtgccagatgaagacggcgggctaccccaatgtgaac
gtccacaacttcacgaccagctggagggacggtctggctttcaacgccgtcatccacaag
caccggccggacctggtggacttcgagaagctgaagaagtcgaacgcgcagcacaacctg
cagcacgcgttcaacgcggccgagcagcacctgggggtcaccaaactgctcgaccccgaa
gatgtgagcgtggaccagccggacgagaagtccatcatcacctacgtggtctccttctac
cactacttctccaagatgaaggccctggccgtcgagggcaagcgcatcgggaaggtgctg
gacagcgccatcgaggcggaccgcatggtggagcgctacgagtcgctggcctcagagctc
ctcgagtggatcggccgcaccatcacggcgctcaacagccgcgacttccccaactcactc
gtgggcgtgcagcagcagctgcacgccttcagcagctaccgcaccgtcgagaaaccgccc
aagttcacggagaaaggaaacctggaggttctgctcttcaccatccagagcaagatgagg
gccaacaaccagaaggtgtacacgccgcgcgaggggaagctcgtggcggagatcaacagg
gcctgggagcggctggagaaggcggagcacgggcgcgagctggcgctgcgtgacgagctc
atccgccaggagaaactggagcagctggcgcgccgcttcgaccgcaaggcggcgatgcgc
gagacctggctggcggagaaccagcggctcgtcatgcaggacaacttcggcgcggacctg
gcggcggtggaggcggccacgaagaagcacgaggcgatcgagacggacatggcggcgtac
gaggggcgcgtgcgcgccgtggagggcgtggcgcgcgagctggaggcagagcgctaccac
gaggtggcgcgcgtggtgcggcgccgcgacggggtgctgcagctgtggcgccgcctgcag
gagctgctggcggcgcggcgtacgcgcctggagatgacgctggcgctgcagcgagccttc
cacgagatgctctacaccggcgcctggatggacgagatgaagctgcgcctgctgtcgcag
gagtgtgggaagcacctgctgggcgtggaggacctcctgcagaagcacgccctcgtggag
gccgacgtggccgcgcaggccgaccgcgtgaaggccgtcaacgcggccgccctgcggttc
gccgaggaggtggacggctacaggccgtgcgaccccgaggtggcgagcgagcgagcgggg
cagctggaggcgtcctacgcggagctgtgcgcgctgtgcgcggcacggcgcgcccgcctc
gaggaggctcgcgccctgcacctcttcctgtgggaggccgaggaggtggaggcctgggtg
cggcaggtggagcccctcctcgccagcgaggacgccggccacgacctcgcggccgtgctg
cgcctgctcgctcggcaccgcgcattcgaggacgagctgagcggccgccgggcccagctg
cagcagacgctgcgcctgggcgaggcggccgcggcggcgttggcgccccgcctggccgac
gccgccgcctccgaggaggagaagcgcgaggcggagcgcgacgcgcaggcggcccgcgct
cgctccgccgagctcgacaagctgtgggcctcgctggagctggcggcgtcgcgcagagcc
gagcgcctgcgggcctccgaggcgctgcaccagctgctgtcggactcggccgacgtcgag
gcctgggcccgggatgcgtcgctgctggtggcggccggcggggacgtgggcaacgacgag
ttctccacgcaggcgctcgcgcgcaagcaccgcgacgtcgtggaggagatcgagggatac
aggccggtgatcgactcgctgcaggagcaggcggcggcgctgcccgcgagcctcgcggag
ccggccggcgtgcgggagcagctgcggcgcctggaggaggcgtacggcgagctggcggcg
ctggccgccgagcgcggccgccgcctgcaggacgcgctggcgctctacaccatccacagc
gagacggccgcctgcctgctctggctcgacgagaagagccagtggctcgacgctctcgac
attcccgagaagctggaggacctggaggtcgtccagcaccggtttgagagcctggagccc
gagatgaacggcctggcgtcgcgcgtcgccgtggtcaatcagctggcccggcagctgctg
gggtcggagcacgccagcgaggacgacatcaaggccaagcaggacctcctgaacgccagg
tggagcgagttccgggagctggcggagagcaagaaggaggcgctgcaggcgcagctgacg
ctgcagagcttccagctggagtgccacgagacacaggcgtggatccgcgagaagacgcgt
ctcatcgagtccacgcagggcctgggcaacgacctggccggtgtcatggcgctgcagcga
aagctgtccggcatggagcgagacctggctgccatagaggtgaaggtgggggacctgcag
ggcgaggcggagcggctggcgcagcaccacccggaacgcgccggcgccgtgcgtggccag
ctggccgacacggcggacgtgtggggcgccctgcgcggcacgctgcgcgcacgcgaggac
tccctcggcgaggcctccaagctgcagaagttcctgcaggacgtcgacgacttccaggct
tggctctccaaaacccagaaggccgtggcgtcggaggacgttcccagcaccctccccgag
gctgagaaactcctggcgcagcacgaagcgatcaagaacgagatcagcaactacagcgag
gatcaccggcgcatgcgggagatgggcgaggaggtgacgcgcgaccagagcgacccgcag
cacgtgttcctgcgccagcggctgcaggccctgcacacgggctgggccgagctgcacagc
atgtgggacaaccggcgcgcgctgctggccgcgtgccacgcgtacctcgccttcgcacgc
gacgctcgccaggctgacggcgttcttagcaaccaggaatacgcgctgagccgcgtggag
atgccggcgacgctgcagtccgccgaggcagccatcaagaagcacgaggagctgaccacc
agcatggaggccaatgacgagaaggtcggcagcgtgctggacacggggaggaagctggtc
ggcgaggggaacttcaacgccgacaagatccaagagaagatggattccatcagcgagagg
cgtgagaagaaccaggcagcagcagcagacctcctgggccgtttgagggacaaccgggac
ctacagaagttcttgcaagattgccaggagctgagcctgtggatgaacgagaagatgctg
acggcgcaggacatgtcgtacgacgaggccaggaacctccactccaagtggcagaagcac
caggccttcatggcggagctggcctccaacaaagagtggctggacaagatcaagaaggag
ggggagcaactgatccgggacaagccggagacagagggcatcgtgcaggagaagctctcg
gagctgggcaccgtgtgggaccgcctggagagcaccacgcagctcaaggcccagcggctc
ttcgacgcgaaccgcgccgagctcttcacgcagagctgcgccgacatcaacatgtggctc
gccgagctggagacacagatcacgtccgaggaccacggcagcgacctcaccagcgtcaac
atcctgctcaagaagcagcagctgctggagaagcagatggaggtgcgcgagaaggaggtg
cgcgagctgcaggaccaggtgctcgtgctgcggcaggagcagcgcaaggagggtgcgggg
ggcccgggggagggcggggaggaggaggtggacggcatgcgcgccagcgtggagggccgc
ttcaagcaggtgacgcagccgctggaggagcgccgcctcaagctgctggcgtccaaggag
gttcaccagttcacccgcgacctcgaggacgagatcctctgggtggaggagcggctgcct
ctggccacgtccacggatcacggcaacagcctgcagtcggtgcagctgctcgtccagaag
aaccagaacctgcagaaggagatggcgggtcacgagccgcgcgtgcacgaggtgtgcgag
cgcggcgaggcgctggcgcagcgcggcctgggcgaggacggcgccgaggccggcgccgcg
gcgcgccgcctgggggagctgcgggcgctgtggggccgcctgcgcgacgaggcgcgggca
cggagcgcgcgcctccacgaggcccaccgcgcgcagcagtactacttcgacgtggcggag
gccgagtcgtggatgagcgagcaggagctctacatgatcgccgaggagaaagtgaaggat
gagcagagcgcactggctctggtgaagaagcacgccatcatggagcagggggtggaggat
tacgccaacgtcatccggcagctggccgagaccagccgcagcctggtggcagactcgcac
cccgagagcgaccggatcctgctgcggcagtcgcaggcggacaagcagtacgccagcctc
aaggacctggcggaggagcggcgcgggaaactggccgagaagcacggcctcttccagctg
agccgcgaggtggaggagctggagcagtggatcgccgagcgggaggtggtggcctcctcg
cacgagctgggccaggactacgagcacgtcaccctcctggaggagcggttcgcggagttt
gcgcgggagacggcggcgacgggccacgagcgcgtgagcggcgtcatggcggcctccgac
gtggtcatcgccggcggcaatgccgagtcggcggcggcggccgccgagtggaaggacacg
ttggctgagggctgggccgagctgctcgagctcatggagacgcgggcgcagatgctcgcc
gcctcgcgccggctgcacaggttcgtgcacgacgcgcgcgaggtgctggggcgcgtgcgc
gagaagcagcagctgctgcccgacgagctcgcgcgggacctcatctccgtggagagccag
cagagggcccacgccgccttcgagaccgacgtgcaggccttcggcacgcaggtggtggcg
ctgcaggagtcggcgcgcggcctgcaggagtcgtacgcgggggacaaggcggaggagatc
cgccagagggagcaagaggccgtgagcggctgggaggggctgctggcggcgtgcgccacg
cgccgccagctgctctccgacacgtgggagaagtgccgcttcttcagcgctgcccgcgac
ctcctgctgtggatggagggcattgagaggcagatggaagctcaggagaagccaagggac
gtttcttctgctgagctgcacatcaccaaccaccaggacgtcaaggccgagatggacgcg
cgtaacgacagcttcgtcgccgtggtggagatggggcagtcgctgctcgaccgcgggcac
tacgcctctgacgagattcaggagaagctggagcagcttaaggacaagcggaagggcatg
gtcctgcactgggaggatcgcgccgagtggctcaagctcatgctggaggtgcaccagttt
gcgagggacgccggcgtggcggaggcctggctgctggcgcaggagccgcacgtcacgtgc
caggagtttggggagagcgcagacgaggtggacgagctgctcaagcggcaggaggccttc
gagaagtcggccggcacctgggaggaacgcatcgcgctgctcgagaggctcaccaccctg
gaggttcgcgagcacaagcggcgggaggcgcgcctggcggaggagaagcgccaggagcag
ctggagcgcgagcgccaggagaaggaggaggaggaggaggaggcgcggcgggcggcagag
caggaggagagggaaaaagagttaatggagcagactgtgcagaatggtatcccgtctgat
caagagtccccgaagaccaacggagaggacgcgaaggaggcggatggcagcgccgtccca
acggccgcggacgaggtccagcccgccacgctcaaggagggctccctgcaccgcaaacac
gagctcgatgccaacgggaagaaggcctccagcaggtcctggaacacggtgttctgcaag
ctcacggaccacggcctgggcttctacaaggacaacaagagcgccgccgcgggggctctg
taccacaacgagccccccctgcccctcgccggcgccgcctgcgaggtggcctccgactac
aagaagaggaagcacgtcttcaagctgcagcttgcggacgggagtgaatacctgtttcaa
gccaaggacgacgacgagatgaacgcctggatccagagcatctgtgggaacgggatgggt
tcggggagcgcgagcggcgtggggatggggggcagcgccagcgccagcgggctgcccagc
ggcggcggagacacggccagcctcggcggtggcggtggagagccgcagcagcagcagcag
cagcagtcgcctgccgccgtggtgctgcgccggaaaccgacgtcgccgggatcggccgcc
agcgacacgacgagcccgagccgcaagagcgagaagcgcttcagcttctttgggaagaaa
aagtaa
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integrated database retrieval system
