Petromyzon marinus (sea lamprey): 116947913
Help
Entry
116947913 CDS
T09614
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04140
Autophagy - animal
pmrn04148
Efferocytosis
pmrn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116947913 (VPS18)
04148 Efferocytosis
116947913 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116947913 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116947913 (VPS18)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116947913 (VPS18)
Hops complex
116947913 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C4H2
zf_RING_Vps8
zf-RING_16
zf-RING_UBOX
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
116947913
NCBI-ProteinID:
XP_032820108
UniProt:
A0AAJ7TLD0
LinkDB
All DBs
Position
31:12562019..12569926
Genome browser
AA seq
965 aa
AA seq
DB search
MASLFDQYEDAQSRPGYQQQRASEPFMQSGIVSARLEDETPIFSKKKINFTPTQPITYLV
ISNNQLCLAMGKNMLLRIDLDNPDKIDELEVLRAQDDKIHKLFLDPTGSHLLIALESQEC
LYLSRNSRKAKNLSKWRSHLIECVGWNKLAGNEVSTGPILVGTRTGTIWESEISSADQGL
FGSNPDQYFKHLYTLGEVDSPSPVCCIEVERIVEGKCFIIATTNKRLYQFFAVMPEGGEN
PVYQSVFNNYMEEPPGFLEFPAEVGYSDLALYTQKLRSSPRAFAWMTGSGVYFGSLDYNR
QGSMLADAQQWPYPTSNDGDTKQPNSIVLTQFHFLLMFPDRMSAICTLNGQLTYEDIAPV
KFGRLLRMIKDPTKGTVWSYTENAVFRYYIARESRDVWQMYLGMGKFDLAKEYCKDRPEC
LDKVQTKQAEHYFKTGKYIESAMYYALTHSYFEEIALKFIEAKQEEALKVFLTKKLTNLK
TEDKTQMTMLVTWIIELYLNKLGQLKDDRDSSFPATQEEFHKFLMQSKLKECLQNNRTAI
YELIASHGNVEDLVFFAVLIQDYERVLSHHIQHEDYTLALEVLARHGDRDLVYRFSPVLM
QHVPRELVKTWIEMGRRLEPRRLIPALVSHHQAQGNEQVNQAICYLEFCVNQLHVEDQAI
HNYLLSLYARHAPHQLITYLESQGQNAQNVGYDLKYALRLCAEHNLHRACVHIYTTMELY
EEAVDLALKEDVELAKLNADRPEDDEDLRKKLWLKIARHVVEEEKDVRKAMACLPNCDLL
KIEDILPFFPDFVTIDHFKEAICSSLQEYNKHIEELKEEMEEATESARRIRQDIQDMRNK
YGVVNAQEKCASCLFPLLNRGFYLFPCGHMFHGDCLVREVYPHLSSSKKATLDDIQRKLG
ETSRDAPGRSHKQKEASTSNAQQSRETLKQELDDIVAVECVYCGEIMLKSIDKPLIDESD
AKEWL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctgttcgaccaatacgaggatgcgcagtcgcggccggggtaccagcagcag
cgggcgagcgagcccttcatgcagtctggtattgtcagtgcacggcttgaggatgaaacg
cccattttcagcaaaaagaagatcaatttcacacccacccagcccatcacctacctggtc
atttccaacaaccaactgtgtctggcgatggggaagaatatgctgttgagaattgatttg
gataaccctgacaagattgatgaattggaggtcctcagggcccaggatgataagatacat
aaactcttcttggatcccacaggttctcatctcctaattgcgttagaatcacaggagtgc
ctgtacctcagccgaaactcccgcaaagccaaaaacctctccaaatggagaagccacctg
attgagtgtgtcggctggaacaagctggcaggaaacgaagtctctacgggtcccattctg
gtgggcacgcgcactggcaccatctgggagtctgagatcagctccgccgatcagggtctc
tttggaagcaacccagatcagtacttcaagcatctgtataccctgggggaggttgacagt
cccagcccagtgtgctgcattgaagtggagaggatagttgagggaaagtgcttcatcatc
gctaccacaaataaacgcctctaccaattctttgcggttatgcccgaaggaggcgagaac
ccagtgtatcagtcggtcttcaacaactacatggaggagccacctggattccttgagttt
cccgctgaggtcgggtactcggatctggcgctgtacacccagaagctgcgctcatcccct
cgcgcctttgcttggatgaccggctccggtgtctactttggatccctcgattacaatcgg
cagggctcgatgctggccgatgcacagcagtggccctaccctacctctaacgatggcgat
acgaagcagccaaattccatcgtcctcactcagtttcacttcctgctcatgttccctgat
cgcatgtctgcaatatgcacactgaatggtcagctaacctacgaggatattgcccccgtt
aaatttggccgcctgttgagaatgatcaaagacccaacgaagggcacagtttggagttat
acggagaatgccgttttccggtattacattgctcgcgagtcgagagatgtttggcagatg
tatctcggcatgggaaagtttgacctcgcgaaggaatactgcaaggacagaccagaatgc
ctggacaaggttcagacaaaacaggccgaacattactttaagactggaaagtacatcgag
agtgccatgtactatgcactgacccacagctactttgaagaaattgctcttaaattcatc
gaagccaagcaagaggaagcactgaaagtgtttctcacgaagaagctcacgaacctgaag
acagaagacaagacacagatgaccatgctggtcacctggatcatagagctctatctaaac
aagcttggacagctgaaagacgaccgagactcgagtttccctgctacgcaggaagaattt
cacaagttcctgatgcaaagcaagctaaaagaatgccttcaaaacaaccgtacagcaatc
tatgaattgattgccagtcatgggaatgtggaggacctggtcttttttgcagtcctgata
caagattacgagcgtgtcctctcgcaccatatccagcatgaggattatacgttagctctg
gaggtactggccaggcatggggacagggaccttgtgtaccgtttctcccccgtgctgatg
cagcacgtgcctcgagagctcgtgaagacttggatagagatgggccgacgtctggagccc
aggcggctcattccagcactggttagccatcaccaggctcagggaaatgaacaagtgaac
caggcaatttgctatctagagttttgcgtgaaccagctgcacgtggaagaccaggccatc
cacaactacctcctgtctctctacgctcggcacgcaccccaccagttgattacgtacctg
gaaagccaggggcagaatgctcagaacgtcgggtatgacctcaagtacgccctgcggttg
tgtgcagagcacaacctacatcgtgcttgtgtgcacatttacacaactatggagttgtac
gaggaggctgtcgacttggcactgaaggaggatgtcgaactggctaagctgaacgcggat
cgcccggaggatgacgaggacctgcgcaagaagctgtggctgaagattgcacgccacgtg
gtggaggaggagaaggatgtgaggaaggcaatggcatgtctgcctaactgtgatctgctt
aagatcgaagatattctccccttctttccagacttcgtcaccattgaccacttcaaagaa
gcaatctgcagctcactgcaagaatacaacaagcacattgaggaactaaaggaagagatg
gaggaggcgacggagagcgctagacgtatccgtcaggacatccaagacatgaggaacaag
tacggtgtggtgaatgctcaagagaagtgcgcttcttgcctcttcccactgctcaatcgg
ggcttttacctcttcccctgcggacacatgttccacggagactgcctggtgcgggaggtg
tacccacatctctcgagcagcaagaaagccacgctggacgacattcagcgcaagctgggg
gagacgtcacgagacgccccgggacgctcccacaagcagaaggaggcgagcaccagcaat
gcccagcagtcacgagagacgctgaagcaagagctggatgacatcgtcgcagtcgagtgc
gtctactgtggggaaataatgctcaagtccattgacaaacctctcatagatgagtctgat
gcaaaggagtggctgtaa
DBGET
integrated database retrieval system
