KEGG   Petromyzon marinus (sea lamprey): 116948122
Entry
116948122         CDS       T09614                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit-like isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116948122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmrn03041]
    116948122
Spliceosome [BR:pmrn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116948122
 Complex B
    116948122
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 zf-CCCH_2 zf-CCCH_3
Other DBs
NCBI-GeneID: 116948122
NCBI-ProteinID: XP_032820398
UniProt: A0AAJ7TPL7
LinkDB
Position
32:6510060..6520502
AA seq 229 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTICLLNLYQNPQNVAQ
TANGTTCMISDVEMQQHYDDFFEEVFVELEEKYGEIEEMNVCDNLGDHLVGNVYIKFHSE
EDAEKAVNDLNNRWFNGQPIQAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRGKRKRRRSRSRSRERRRSRSKERRPDRSRERRRSKERAGRF
NT seq 690 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcgtccatcttcggcacggagaaagacaaggtcaactgctccttc
tacttcaagatcggtgcctgtcggcatggtgaccgctgctcacgcctgcacaacaaaccg
accttcagccagaccatatgcctgctgaacctgtaccagaacccacagaatgtggcccag
acggccaacgggacaacctgtatgatcagcgatgtcgagatgcagcagcattatgacgac
ttcttcgaggaggtgtttgtggagctggaggagaagtacggagagattgaggagatgaac
gtctgcgacaacctgggagatcacctggtcggaaacgtctacatcaagttccactctgag
gaggatgcagaaaaggccgtcaacgacctcaacaaccgttggttcaacgggcagcccatc
caggctgagctctctcctgtcactgacttccgggaggcctgctgccgccagtacgagatg
ggggagtgcacacgtggaggcttctgcaacttcatgcacctcaagcccatctctcgcgag
ctgcgtcgggaactgtatggacgtggcaagcgcaagcgacgccgttcccggtcacgctcg
cgggaacgtcgtcgatctcgctccaaggaacggcgccctgaccgcagccgtgagagacgt
cgttccaaggagcgcgccggccgcttctga

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