Petromyzon marinus (sea lamprey): 116948139
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Entry
116948139 CDS
T09614
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-like isoform X1
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116948139
04121 Ubiquitin system [BR:
pmrn04121
]
116948139
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
116948139
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
116948139
BRITE hierarchy
Motif
Pfam:
zf-H2C2_2
zf-C2H2
BTB
zf-C2H2_4
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-Di19
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
116948139
NCBI-ProteinID:
XP_032820435
EnsemblRapid:
ENSPMAG00000036121
LinkDB
All DBs
Position
32:7461769..7527615
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AA seq
891 aa
AA seq
DB search
MNVSDTPVAIRLVNPSHPGAMLHRANQLRQAGTLCDVVIQVDGQQFPAHRAVLAAASKMF
ELLFGQRGDTTRYTLDFLSPRTFAQVLEYMYTSTLEVRPEDLDDLLYAAEILEIEYLEEQ
CLKLLEGLQGSEGNESEVTEDEGHQSGANIREHGDTARMPHGVYLQHTVAGVSVAEHSHR
DLYPRTSQAALQIATEARLPGVGSRKKLYSRTSRSATHRLSEGSLSTDNADAAVPSHSLE
GIQSEESMAPEQVENSAFESAYSVGEDGPQRSIDRTNSDPSLYLRPSNADEEAVTVREQG
RSSSFSRYREDPHEDRHKNGIFLRLQEKAAKAVVTEVLADEGSMPQDLACSSQKLSRGEL
EAGRGREDPSGLYLRAPSHHALEMMAAMLGEQHRLTEAQAAGLQAGCFSLSPRRVAVDSL
MSLRHSLVAGQHLGGSSQMETSGADGNQASVATRQESMEERQERSGSEVEEAPGTPTRGS
VITSARDLHRHSSQDDPEDVVMRQPLDSDEEAMVSPPEVASNVEIEGHTPYHRVSREATR
LELMDPALIYNMHMLGALGSGLYPLALHQQHQHQQQQQQQRAFQAQELASRLGEMSSALR
ADQSAMQLYLPPGSSSAPGEEKCDICNVSFSSRESLWEHRKLHMEKGYACDLCGKRFLDS
LRLRMHLLSHSANGQSYSCEQCGAAFTKESSLEHHREAHRAESGMAYFCLLCGKRLQTQS
SLLQHMEVHAGAHEYVCGECNRTFPSHSTLKRHLRSHTSGEHPYECEFCGSCFRDEAILK
NHKRLHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLR
THNGAAPYQCTLCLQFCSSLAGMQKHMKAHRPEDIPPDWRIEKTYLYLCYV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtcggacaccccggtggccatccggctggtgaacccctcgcacccaggggcc
atgctccaccgggcaaaccagctgcggcaagccggcacgctgtgcgacgtcgtcatccag
gtggacgggcagcagttcccggcccatcgcgccgtcctggcggcggccagcaagatgttt
gagctgctgtttggtcagcgtggcgacactacgcgctacactttggactttctctcgcct
cgcactttcgcgcaggtgctggagtatatgtatacatcaacattggaggttcggccagaa
gatctggacgatctcctatatgcagctgagatattagagattgaatacttagaagaacag
tgtttaaaacttcttgagggcctgcagggttcagagggcaatgagtcagaggttacggaa
gatgaaggacaccaaagtggtgccaacattcgtgagcacggtgacactgccagaatgcca
cacggtgtctatctgcaacacactgtggctggggtctctgtggcggaacattcacatcgt
gatttgtacccaagaacgtcgcaagctgctttgcagatagcaaccgaggcgaggctgcct
ggtgttggcagccgcaaaaaactctactcgagaacgtcgcgaagtgcaacacaccggctc
agcgaaggttcactgtcgactgataacgcggacgctgcggtgccttctcacagcctcgaa
ggcattcagtctgaagagtccatggcaccagagcaggtcgagaacagtgctttcgaatcg
gcttattctgtcggcgaagatgggcctcagaggtccatagaccgtaccaatagcgatccc
agtttgtatctcagaccgtcgaatgccgacgaagaggctgtgacggtaagggagcaggga
cgaagcagtagcttctccagatatcgggaggacccccatgaagatcgccacaaaaatggc
atttttctgagactgcaggagaaggccgcaaaggctgtggttacagaggtcctcgccgac
gaaggttccatgcctcaggacctggcatgctcgtcgcagaagttgagcaggggtgagctg
gaggcaggccggggtagggaggacccttcgggcctctatcttagagcgccttcccatcac
gcgctggaaatgatggccgccatgctaggggagcagcatcgcctgacagaggcccaagcg
gcgggcttgcaagccggctgcttctcgctgagcccccgacgagtcgccgtggacagcctc
atgagcctgcgacattcgcttgttgccggccagcaccttggaggttcgagccaaatggaa
acctcaggcgcggatgggaaccaggcctccgtagcaacacggcaagagtcgatggaggag
aggcaggagcggtcgggctctgaggtggaggaggcgcccgggacacccacaagaggcagc
gtgatcaccagcgctcgcgacctccaccgccactcgtcacaggacgaccccgaagatgtg
gtgatgcggcagccgctcgactcagacgaggaggccatggtgtctcccccggaagttgct
tcaaatgttgagatcgagggccacactccttaccatcgggtcagccgggaggctacgcgg
ctggagttgatggaccccgcgctcatctacaacatgcacatgctgggtgccctgggctct
ggtctttaccccctcgcactgcatcagcaacaccagcaccagcagcagcagcagcagcag
cgagccttccaggcccaagagcttgccagccgcctgggagagatgagctctgcgctgaga
gcagaccagtcagccatgcagctctaccttccccctggttcctcgtcagctcccggagag
gagaagtgtgacatatgcaatgtttccttctcaagtcgagagagcctgtgggagcacagg
aagctgcacatggagaagggctacgcctgcgatctctgcgggaagcgcttcttggacagc
cttcgtcttcgcatgcatcttctgtctcattcggcaaacgggcaaagttactcctgcgag
cagtgtggcgccgcattcaccaaagaatccagtctggagcatcacagggaggcacacaga
gcagagagcggaatggcctacttctgcttgctgtgcgggaagcgactgcagacccagagt
tccctgctgcagcacatggaggtgcatgcaggggcgcacgagtacgtgtgcggggagtgc
aaccggaccttccccagccactccactctgaagcggcacctgcgctcacacacctccgga
gagcacccgtacgagtgcgagttctgcggcagctgcttccgcgacgaggccatccttaaa
aaccacaagcggttgcacacgggggagaagccctacgagtgtaatggctgcggcaagaag
ttcagcctcaagcatcagctggagacgcactacagagtgcacactggcgagaagccgttt
gagtgcaagttgtgccaccagcgctccagggactactcggccatgatcaagcacctgcgg
acgcacaacggcgcggcgccctaccagtgcaccctctgcctgcagttctgcagcagcctg
gccggcatgcagaagcacatgaaggcccaccggcccgaggacatccccccggactggcgc
attgaaaagacgtacctctacctctgctacgtctag
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