Petromyzon marinus (sea lamprey): 116948141
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Entry
116948141 CDS
T09614
Symbol
TBC1D5
Name
(RefSeq) TBC1 domain family member 5 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116948141 (TBC1D5)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116948141 (TBC1D5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
116948141
NCBI-ProteinID:
XP_032820440
UniProt:
A0AAJ7TP79
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Position
2:complement(17263995..17279892)
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AA seq
835 aa
AA seq
DB search
MQSRDNGGSSCEARHTQPEYGEWSSEQSWHPLQSERGEEVGGPCLESDVENNTADSYRQE
WVRMFDDQEHVSRVRQRGMKGQLRSSRFRSVCWKMFLKCLPEDRELWVKITEELRQQYDQ
IKLMHITNPRKEAGEKDLNINNPLSQAEESPWNRFFQDKELRAVIEQDVTRTFPEIQYFQ
EERVQELLTDILFCFARENEHLLYRQGMHELLAPIVFVLHCDYQAFLHATELSQATNEMR
TILNPEYLEHDAYALFSQLMETAEPWFSNSERKKYMGRDPTVNAVPFARPQDNSPSIAII
TKLNRINDQVLKQHDTELYMHLLRLEIAPQIYGIRWVRLLFGREFPLQDLLALWDAIFAD
SSNLSLVDYMFVAMLQNIRDPLLSSNYQTCLGLLMHYPPSGDLHHLVQKALFLRDPKFCV
LQNNPRPNNYKFSGTVETPKASAIVRHTEHAARQTQQRPAVNINKVSAGLLNLTRKLIGP
PASGQATSVVPRARLMTDTYVHVHQQQEQQQRILKSESVPSHLSKGKVEAGNGEKAPLPA
DSMPGGTGLGWGEGSSSPSTESLSREEPRPLPSSPAGTRGKALFGSGSTLPRPRSVSKTR
RELEEDLQSQISLLQAKLMEMQGMCHYCAEKLDQHLAKIQEDILQENLQREDEILVSLAG
IKQIKDILKGTLRFNQSQLESGDNEEISITDNHYQPDGSQAAGPGSKVAKVSVPHRTAED
PSLGLQSPRPIRQNLPMDNPLMEIRHARKSTLQEIAHGVECSDEGGHAALSSDGGNGSSM
QKHPLAESQHPLGDDQTLQGEDHHTAGPVRSLISPDEESGSNTSRDFLIVSPLDL
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagggacaatggaggttcctcttgcgaggcgaggcatacgcaacctgaatat
ggcgagtggagcagtgaacagtcctggcaccccctgcaatccgagaggggagaagaagtg
ggtggaccgtgcctggaatctgatgttgagaacaacactgccgattcatacaggcaggag
tgggtgaggatgtttgacgaccaggagcatgtttctcgagtgcggcagcgtggcatgaag
ggccagctgagaagcagccgattccgtagcgtgtgctggaagatgttcctgaagtgcttg
ccggaggacagagagttgtgggtgaagataactgaggaactgaggcagcagtacgaccaa
atcaagctcatgcacatcacaaaccccaggaaggaggcaggagagaaagacttgaacatc
aacaaccctctatcacaagcagaagagagtccctggaaccggtttttccaggacaaggaa
ctgcgtgcagttattgagcaagatgtaactcgcacgtttcccgagatccagtacttccaa
gaggagcgggtgcaggaacttcttacagatatcctcttctgttttgcccgtgagaacgag
catctgctgtacagacagggcatgcatgagctgctggcacccatagtgtttgtgctgcac
tgcgactaccaggctttcctgcacgccaccgagctctcccaggccaccaacgagatgaga
accatcttgaacccggagtacttggagcatgatgcttatgccttgttctcacaactaatg
gagacggcagaaccctggttttccaactccgagcggaagaaatacatgggtcgtgaccca
actgtgaacgccgtcccgtttgcgcggccgcaagacaacagcccctccattgccatcatc
accaagctcaaccgtatcaacgaccaagtgctcaagcagcatgacacagagctctacatg
cacctgttgcgcctagagatcgcaccgcaaatctacggcatccggtgggtacgccttctg
ttcggacgcgagttccccctgcaagacctattggcgctgtgggacgccatcttcgctgac
agttccaacctctcgcttgtcgactacatgttcgttgccatgctgcagaacatccgtgac
ccactgctgtcgagtaactaccagacgtgcctgggactgctcatgcattaccctcccagt
ggagatctccatcatctggtgcaaaaagcactcttccttcgtgaccccaagttttgtgtt
ttacagaacaatccaaggcccaacaattacaagttctcgggcactgtggagactcccaag
gcatctgcgattgtgcggcacaccgaacatgctgccaggcagacacagcaacggccagcc
gtcaacataaacaaagtctctgcgggactgctcaacttgacgcgcaaactcataggccct
ccggcatcgggacaggccaccagcgttgtgccacgagcacgcctgatgacggacacttac
gtgcacgtgcaccagcagcaggagcagcagcagcgtatactgaaatctgagagcgtgcct
tcacacctcagtaaggggaaggtcgaggcaggcaatggggaaaaggctcctttgcctgcc
gacagcatgcctggtggcacaggcctgggatggggtgagggcagctcgtccccaagcaca
gaaagtctgtcccgtgaggagccgaggccattgccatcctcgccggccggtacccgtggg
aaggcgctgttcggtagcggtagcacacttcctcggcctcgcagcgtcagcaagactcgc
agggaactggaggaagacctgcaaagccaaatatcacttctgcaggccaagctgatggaa
atgcagggcatgtgccattactgcgcagagaaattggaccagcacctggccaaaatccag
gaggacattctgcaagagaacctgcagagagaagatgagatcctggtgtccctggctggc
atcaaacagattaaggacatcctgaaggggactctcaggtttaaccagagccagctcgag
tctggggacaatgaggaaatctccatcactgacaaccactaccaaccagatggcagccag
gctgcagggcctggcagtaaagtggccaaggtctcagtgccacacagaacagccgaggat
ccttcactcggccttcagagccctcgtcccatccggcagaacctgcccatggacaaccca
ctcatggaaatccgacacgctcgcaaaagcaccctgcaggaaattgcacacggtgtcgaa
tgtagtgatgaaggcgggcatgccgccctgtcaagtgatggaggcaatggcagcagcatg
cagaagcatcccttagctgaaagccaacacccattgggagatgaccaaaccctgcagggt
gaagaccaccacactgctgggcctgtccgctcgctcatcagcccagatgaagagagtggc
agcaacacgagccgagactttctcattgtgagcccattggacctataa
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