KEGG   Petromyzon marinus (sea lamprey): 116948265
Entry
116948265         CDS       T09614                                 
Symbol
DCAF4
Name
(RefSeq) DDB1- and CUL4-associated factor 4 isoform X1
  KO
K11799  DDB1- and CUL4-associated factor 4
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmrn04121]
    116948265 (DCAF4)
Ubiquitin system [BR:pmrn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     116948265 (DCAF4)
SSDB
Motif
Pfam: Beta-prop_DCAF4 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40 WDR55 WD40_Gbeta Beta-prop_THOC3 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st EIF3I WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd PEP5_VPS11_N Beta-prop_VPS8 Beta-prop_WDR75_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 116948265
NCBI-ProteinID: XP_032820648
UniProt: A0AAJ7TMD6
LinkDB
Position
33:331810..351525
AA seq 532 aa
MDRSRSCGGLKCGYPHLQGVSAAWKSRPQTLSRGSRNLPRVEASSASSGVSKMSGRWRGG
RKRGHWVAPEPGHRRMRHRHRQSEAHGEGTSSAAAVSQVAQTENTSDAPELPGFYFDREK
NRYFRLLPGHNNCNPLTTESICTREKERQRLQLLKQDESTNRVPQNGVPVTRVLNERRAG
FHSTRSYSRLMHELKLVAMQRRVVHSVSGDFGLMEVDSKSERIFALYNEHTHYKYGLFDL
SCREGKLHTKIYGVLKASPCKLNSMSWASFNGKDSHILIARNEVAVGDGAMHASVELVPV
SYFTEEGTGVDAIFNFTILTFSCVYGRHPQHNHCFSAGCSGKAVVTDVVTGHQQTIHTHS
DVLAQCFAEQSPLLYCGCRSGKVWRADLRDRTGPNSSRRRRSLLRHESAIVALRTLADEN
YLLASDMAGKIKLWDVRTQRTVLEYHGHRNEHAILPLHVSDDENFIVAVGQDNSTRFWRL
RDGLLLRTIPSAVPVSCTKAALSVALMPSLSRPHGAPGLLVAAGHRLFHYCY
NT seq 1599 nt   +upstreamnt  +downstreamnt
atggacaggtcgcgttcgtgtggcgggctaaagtgtgggtatcctcacctgcagggcgtc
tcggcagcgtggaagagtaggccacaaaccctctcgaggggctctcgaaatctgcctcga
gtggaggcttcttcagcaagcagtggcgtcagcaagatgagtggaaggtggcgcggagga
aggaagcgaggccactgggtggcaccagagcctgggcacaggcggatgagacacagacac
cgacagagtgaagcacatggggagggcacgtcctcagcagctgccgtctcacaggtggcc
cagacggagaacacgagcgacgcaccagaactcccaggcttctactttgaccgggagaag
aaccgttactttcgactgctgcccggccacaacaactgcaaccccttgacgacggagagc
atttgcacacgagagaaggagcgccagcgtttgcagctgctcaagcaggatgagagcacc
aacagggtccctcaaaatggagtgccggtcaccagggtgctcaacgagcgaagagctggc
ttccactcaacacgatcctacagcaggttgatgcacgagctgaagcttgtggccatgcag
cggcgggtggtgcactccgtgagtggcgacttcgggctaatggaggtcgactcaaaatcg
gagcgcatcttcgctctgtacaatgagcacacccactacaagtatgggctctttgacctg
tcctgtcgggagggcaagctccataccaagatatacggtgtgctcaaggcttctccctgc
aagctaaactccatgagttgggcatcgttcaatgggaaggactctcatattttaattgct
cgcaatgaagtggcggtgggtgacggcgcgatgcacgcgtcggtggagctggtgcccgtc
tcatatttcaccgaagaaggcacaggcgttgatgcaatcttcaacttcaccatcctgact
ttttcctgcgtttatggccgtcatcctcaacacaaccactgcttcagtgcaggctgctcg
gggaaggcggtggtgacggatgttgttaccgggcaccagcagaccatccacacacacagc
gacgtcttagcacagtgctttgcagagcagagcccactgctgtactgcggctgtcggtcg
ggcaaggtgtggcgggcagacctgcgggacaggacagggcccaacagctcgcgacggcga
cgctcactactccggcacgagtcggccatcgtggccttgcgcacgctcgccgatgagaac
tacctgctcgccagtgacatggccggcaagattaaactgtgggacgtgcggacgcagaga
accgtgcttgagtaccatgggcatcgcaacgagcacgccatcctccctctgcatgtcagc
gacgacgagaacttcatcgtggccgttggacaggacaactccacgcgcttttggcggctt
cgcgacggcctcctcctccgcaccattccgtcggccgtgcccgtgtcctgcaccaaagcc
gccctgagcgtggcactgatgccgagtctaagtcgcccccatggggcgcctggtctgctc
gtggccgccggccatcgcctcttccactattgctattga

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