Petromyzon marinus (sea lamprey): 116948266
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Entry
116948266 CDS
T09614
Name
(RefSeq) poly(A) polymerase beta-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116948266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116948266
Enzymes [BR:
pmrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
116948266
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
116948266
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
116948266
NCBI-ProteinID:
XP_032820656
UniProt:
A0AAJ7X4E2
LinkDB
All DBs
Position
33:complement(393718..418957)
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AA seq
775 aa
AA seq
DB search
MQGSQSSQSGRQHGITSPISLAEPREADRVLTRHLMNTLLPFGVFEEEEELNHRMVVLGK
LNNLAKAWVREVGESKNLPPAILENGGGKIFTFGSYRLGVHTKGADIDALCVSPRHVERI
DFFSTFIEMLKNQEGVKDLRSVEDAFVPVIKLTFDHIEIDVLFARLALQVIPDNLNLRDN
ALLKNLDIRCIRSLNGCRVTDEILHLVPNVEHFRMTLRAIKLWAKRRGIYSNMLGFLGGV
SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPKPVLLKQPEECNLNLPVWDPRVNPT
DRYHVMPIITPAYPHQNSTYNVTMSTRTVMVEEFKQGLAITDEILMGKAEWSKLFESPNF
FLKYKHYIVLTASALTEEQHLEWVGLVESKIRILVGNLERNEYITLAHINPQSYPGPKDN
PDKQGVTTVWFIGIIFKKLENPENVNVDLTLDIQSFTDTVYRQAAHISMLKEGMQIEAIH
VKKKQLSQFLPGDVLQKKKKENGRSGSARTSLNSGSVLDSSRDSDCSFSSPTIIRVLNSD
SNQPSSPVTGENGSVSSPSASPPVAADDKSPSPRTPSPENPSMPVAGNAIPVISTRSVRV
PPHHPSLQVLRLSYRATFALAGPLHAASVPSGTVVRVVTPTRLVNTPPPATGAPATAGHP
TPPQGVKRPQSPGSKTSPPKRHKSPPSEAAPAGDSDMDTDSQPLKNSDTGNAVTKTGASE
DCDILELREETTPIQTTDVQTETQKQASNELSDGSAPVPTAVKVVKNSIRLKLNR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcagggatctcagtcttcccagtcagggaggcagcatggcatcacgtcgcccatcagc
cttgcggagccacgcgaagccgaccgtgttctcacacgacacctcatgaatactcttctg
ccatttggggtctttgaagaggaggaggaacttaaccaccggatggttgttttggggaaa
ttaaataacttggcaaaagcatgggtccgagaagttggtgaaagcaagaatcttccacca
gcaattttggagaatggcgggggtaaaatatttacgtttgggtcctatcggctgggagtt
cacacaaaaggtgccgatattgacgccctgtgtgtttcgccgcgacacgtggaacgtatc
gacttcttctcgactttcatcgagatgttaaagaatcaggagggagtaaaagacctccgg
tctgtggaggatgcctttgtacctgtcatcaagcttacgtttgaccacattgagatcgac
gtgttgttcgcacggctggctctgcaggtgatccccgataacctaaacctccgtgacaac
gcactactcaaaaacctcgacatccgatgcatccgcagcctcaatggctgccgcgtgacg
gatgaaattttgcacctggtgcccaacgtagaacacttccgcatgacgctgcgcgccatc
aagctctgggcaaaacgccgtggaatctactcgaatatgctgggcttcctgggtggcgtg
tcatgggcaatgcttgtggcacgaacctgccagctctaccccaacgccatcgcctccacc
ctcgtgcacaagttcttccttgtcttctccaagtgggagtggcctaagcctgtacttctg
aaacagcccgaggaatgtaacctcaacctgcctgtgtgggacccacgggtgaacccaaca
gacaggtaccacgtgatgcccatcatcacacccgcgtaccctcaccagaactccacctac
aacgtcaccatgtccacacgcaccgtcatggtggaggagttcaagcaaggactcgccatc
accgatgaaattctgatgggcaaagcggaatggagtaagctgtttgagtcgccaaacttt
tttctcaagtacaagcattacatcgtactgacagcaagtgcactcacggaagaacagcac
ctagagtgggtgggactcgtggagtcgaagatccgcatcctcgttggaaaccttgagcgc
aacgagtacatcactctggctcacatcaacccgcagtcctaccccggccccaaggacaac
ccggacaagcaaggcgtgacaacggtttggttcatcgggatcatcttcaaaaagttggag
aacccggagaatgtgaatgtggacctgacgctagacatccaatcattcactgacacggtt
tacaggcaagctgcacacatcagcatgctcaaagagggcatgcagatcgaggccatccat
gtcaagaaaaagcagctcagccagtttctgcccggtgatgttcttcagaaaaagaaaaag
gagaacgggcgaagtggctcggcgcgcacctccctgaacagcggcagcgtgctcgactcg
tcgagggactccgactgcagcttctcgtcgcccaccatcatccgtgtcctcaactcggac
agcaaccagccgtcctctccggtgaccggtgagaatggcagtgtctccagcccttcggcg
tcgccccctgtggcggccgacgacaagtcgccctcgcctcggacgccatcgccagaaaac
cccagcatgcccgttgccggcaatgccatcccagttatctccaccaggtccgtgcgtgta
cccccccatcatccctcccttcaagtgttacggctgagttaccgtgccacgtttgcgctc
gcagggcctctccacgctgcctccgtcccgtcggggacggtcgtacgggtggtgacgccc
acgcggctcgtgaacacgccgccgccggccaccggcgcccccgccactgccggacatccc
acaccgccgcagggagtcaagcggccgcagtcgcccggaagcaagacgtccccacctaag
cggcacaagagccccccgagcgaggctgccccggctggcgactcggatatggacactgac
tcccagccactgaaaaacagtgacacaggcaacgctgtcacgaaaactggcgcatctgag
gactgcgacattctggaacttcgggaggagacgacgcctatacaaacaaccgacgtgcaa
acggaaacgcagaaacaggccagcaacgagctgtctgatggctccgcgccagttcccacc
gccgtgaaggttgtaaaaaactccatccgtctcaagctcaaccggtag
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