Petromyzon marinus (sea lamprey): 116948334
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Entry
116948334 CDS
T09614
Name
(RefSeq) homeobox protein SIX2-like
KO
K15614
homeobox protein SIX1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116948334
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116948334
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Motif
Other DBs
NCBI-GeneID:
116948334
NCBI-ProteinID:
XP_032820797
UniProt:
A0AAJ7TMV6
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Position
33:4065457..4079346
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AA seq
391 aa
AA seq
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MPSHAAAAAEMSFGFTQEQVACVCEALLQGGNMERLGRFLWSLPACEQIQRSESILMAKA
VVAFHQGNFRELYAVLESQPFSARNHPKLQQLWLKAHYTEAERLRGRPLGAVGKYRVRRK
FPLPRTIWDGEETSYCFKERSRGVLRDWYAHNPYPSPREKRELAQATGLTTTQVSNWFKN
RRQRDRAAESRDRDGSDNADGDGTARPPGNTTTTTAAAAATTTTTTTTASAAASTVAAGG
VVARSAGGGSLSGTEDEEGSTPCQSPLSHREAAGPFHSRGHHDGLAAAAAALEREGYALM
AASGHEGDGHGGGPLDEGDPQGPHPPPLSCMAMLSPPPPLPPLPHAQQHGGPDLAFGDGA
LNGQHSYADLFPPSTESLLYSLSANLLELGS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctcacgccgccgctgccgccgaaatgtccttcggcttcacgcaggagcaagtc
gcgtgcgtgtgcgaggcgcttctgcagggcggcaacatggagcgcctgggacgcttcctc
tggtcgctgcccgcgtgcgagcaaatccagcgcagcgagagcatcctcatggccaaggcg
gtggtggcgttccaccagggcaactttcgggagctttacgccgtgctggaaagtcagccc
ttctcggcgcgcaaccaccccaagctgcagcagctgtggctcaaggcgcactacacggag
gcggagcgcctgcgcggacgaccgctgggagccgtgggcaagtaccgggtccgacgcaag
ttcccgctgccgcggacgatctgggacggcgaggagacgagctactgcttcaaggagagg
tctcggggagtgctcagagattggtacgcgcacaacccctacccgtccccgcgcgagaag
cgagagctggcgcaggcgaccggtctgaccactacgcaggtcagcaactggttcaagaac
cggcggcagagggatcgagcggcggagtcgagggacagagacggcagcgacaacgcggac
ggggacggcacggcacgaccccccgggaacaccaccaccaccaccgccgccgccgccgcc
accaccaccactacgaccaccaccgccagcgcagccgcgtcgaccgtggctgcgggagga
gtcgtcgcgcgctcggccggtggcggctccctgtcgggcacggaggacgaggagggttcc
accccgtgccagtcgccgctctcgcaccgggaggcggcggggcccttccactcgcgcgga
caccacgacggtctggcggcggccgcggcggccctggagagggaaggctacgcgctcatg
gccgcgtcgggccacgagggcgacggccacgggggaggccccttggacgaaggggacccg
cagggtccacaccccccgccgctgagctgcatggccatgctgtcacctccgccgccgctg
ccgccgctgccccatgctcagcagcacgggggtccggacctcgcgtttggagacggagcg
ctgaacggacagcacagctacgcggatctctttccgccctcgacggagtcgctgctctac
tcgctgtcggcgaatttgctcgaactgggttcctga
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