Petromyzon marinus (sea lamprey): 116948340
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Entry
116948340 CDS
T09614
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116948340 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116948340 (VPS54)
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116948340 (VPS54)
Membrane trafficking [BR:
pmrn04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
116948340 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
116948340
NCBI-ProteinID:
XP_032820811
UniProt:
A0AAJ7TML5
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All DBs
Position
33:complement(4845596..4876577)
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AA seq
1013 aa
AA seq
DB search
MASGRQGHPSTAPAASAAALARGRATEELGKGGVVAAAAARAKALHPSRSLPDVCPNDSS
VPRGQDGLREARDGPSVVTDQHKWTVYHSKVNLPAALNDPRRAKRESDFFTKTWGLEFTE
VPVQPSPHLPEVTREDFEKYLSSTSKCYAVHQKCQATCPQKDEVDRVLDAVSCTHGKQQS
DLEQVPKMFLKPDFALEDPATFNTVLPWSQFGGAQQRVGARNAPAVPDGFSSRLLQEKLS
HYLDVVEVNLARQISLRSDAFFQAMESQRDVQEHLRRAALTVRSLRSLVGRVDTVLASGS
LRVLRLATARRNAASLHGKLKLMAAVQQTQPTVQLLLSTAEYSGALDLIATTQEVLQQEL
QGVHSFRHLGSQLCELEKLIDKMMVEEICRYAEVDLNRTLQEGEAVLEEERLVSLVFGLL
RQRRLDFLDMYNDRIVMAVRNIVKQTVMEAVSQVDEIDTEIVTKLADQIRLMIFPLWLDL
LQKVFSNLLVFLRRVKATLNVMRDVVHMALERAYERARELEERTRPPSHGPSQRSHNSAE
RSDLPVLECRPGGELPHVGQQEDAAGGGDTPSSGSASDTDQTTDSSASCDQALASSKAHE
GLQLQLLGEELRLSVLELERVSSSVQELLHSTSDCCHDRCVKFIMARARQDGSLERLSPA
EFVALSQAVEGFVAASEEISGRKSTSLRGALQSQASRFVQRFHEERRTKLSLLLDNERWK
QADVPAEFQQLVDSMAGGVIALSEKKPAASQDKKLADYLFVDGQKYTVVSTVLLLIRMVL
EYCQCVEDIPSVTTDMLPRLTDLLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALASRC
LQLILQYIPLIRAHFEARLQPKQYNMLRHFDHMTKDYSDHIGEISAKLVAIMDSMCEKLL
FRYEVKAPVPSACFRNVSKQMAKMHEAVCELLPNEQVQLLFLRINACFKQHLKGQLSRLG
VVSDGGPQHGLVTSDLAFYVGNLRGLKGLEQLDLNLTEIWEQKRSGVPRSEQW
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggcaggcaaggccacccgtcgacagctccagcggcgtcggcggcggcgttg
gcgcgcggcagggccaccgaggagcttggcaagggcggcgtcgtcgctgcagcagcggcc
cgcgccaaggcactccacccgagccgctcgcttccggatgtgtgccccaacgactcttcg
gtgccacgtgggcaagatgggttgcgggaggcccgggatgggccgagtgtggtgacggac
cagcacaagtggacggtgtaccactcgaaggtgaacctaccggcggcgctcaacgacccg
cggagggccaagcgcgagtccgacttcttcaccaagacgtggggcctcgagttcaccgag
gtgcccgtccagccatcgccccacctgccggaggtgacgcgcgaggactttgagaagtac
ctgagcagcaccagcaagtgttacgcagtccaccagaagtgccaggctacctgtccgcag
aaggacgaagtggatagggttcttgatgctgtcagttgcacgcacggtaaacagcaaagt
gatctggaacaagtgcctaaaatgtttctgaagccagactttgccctggaggatccggcc
acgttcaacacggtgctgccctggtcacagtttggcggcgcgcagcaacgcgtgggcgcc
agaaacgctccggcggtgcccgacggattctcttcgcgcctcctgcaggagaagctgagc
cactacctggacgtggtggaggtgaacctggcgcggcagatctcgcttcgctccgacgcc
ttcttccaggcgatggagtcccagcgcgacgtgcaggagcacctgcggcgagcggcgctc
acggtgcgctcgctgcgctccctcgtggggcgcgtggacacggtgctggcgagcggctcg
ctgcgggtgctgcgcctcgcgactgcgcgacgcaacgccgcgtcgctgcacggcaagctg
aagctgatggcggccgtgcagcagacgcagccgaccgtgcagctgctgctgtccacggcc
gagtacagcggcgccctcgacctcatcgccaccacgcaggaggtgctgcagcaggagctg
cagggggtgcacagcttccggcacctcggctcccagctgtgcgagctggaaaagctcatc
gacaagatgatggtggaggagatctgcaggtacgccgaggtggacctcaacaggaccctg
caggaaggggaggccgtgctggaggaggagcggctggtgtccctggtgtttgggttgctg
cgccagcggaggttggacttcctggacatgtacaatgaccgcatcgtcatggccgtgagg
aacatcgtcaagcagactgtgatggaagcagtttctcaagttgatgaaattgacaccgaa
atcgtaacaaagctggcagatcaaataaggttgatgatctttcctctttggctcgacctc
ctccagaaggtcttctcgaaccttctcgtatttctacgtcgggtgaaggccacgctgaac
gtgatgcgggacgtggtgcacatggcgctggagcgcgcttacgagagggcccgcgagctg
gaagagaggacgcggcctccttcccacggtccatcgcagcgcagccacaactccgccgaa
cgctcggacctccccgtgctggaatgcaggccgggcggcgagctcccccatgtcggccag
caggaggacgctgctggcggaggtgacacgccgtcgagtggctctgcgtccgacaccgac
cagacgacggactcctcggccagctgtgaccaggccttggcttcctcgaaggctcacgag
ggccttcagctgcagctgttgggggaggagctgcgactcagcgtgctagagctggagcga
gtgtccagcagcgtccaggagttgctgcacagcacctcagactgctgccacgaccgctgc
gtcaagttcatcatggccagggcacgccaggacggatcgctcgagaggctgagccccgcg
gagttcgtggccctctcgcaggccgtggaggggttcgtggccgcatcggaggagatctcg
ggccgcaagagcacctcactgcggggggcgctgcagagccaggcgagccgcttcgtgcag
cgattccacgaggagcggagaacaaaattgagcctgctgctcgataacgagcgatggaag
caggcggacgtccccgcggagtttcagcagctcgttgactcgatggccggaggagtgatc
gcgctgtcggagaaaaagcccgcagcatcacaagacaagaagctggctgactacctcttt
gtggacgggcagaagtacacggtggtgagcaccgtgctgctgttgatccgcatggtgctg
gagtactgccagtgtgtggaggatatcccgtccgtcaccacggacatgctgcccaggctc
acagacctcctgaagcacttcaactctcgcagctgtcagctcgtgctgggtgctggggcc
ttgcaggtggtcggcttgaagaccatcaccaccaaaaacctcgcgctggcatcgcgctgc
ctgcagctgatcctgcagtacatcccgctcatccgcgcacacttcgaggcccgcctccag
cccaagcagtacaacatgctgcgccactttgaccacatgaccaaggattacagtgaccac
ataggggagatttccgccaagttggtcgcgataatggacagcatgtgcgagaagctgcta
ttcagatacgaggtgaaggcgcccgtgccgtcggcatgcttccgcaacgtgagcaagcag
atggccaagatgcacgaggccgtgtgtgagctgctgccaaacgagcaggtgcagttgctc
ttcctgcggatcaacgcctgcttcaaacagcacctcaaggggcagctgtcccgtctcggc
gtcgtgagcgacgggggaccgcagcacgggctggtgacatccgacctggcgttctacgtg
gggaatctgcgtgggctgaaaggcctggagcagctggacctcaatctgactgagatctgg
gagcagaagagaagtggggtgccacggagcgaacaatggtga
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