Petromyzon marinus (sea lamprey): 116948357
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Entry
116948357 CDS
T09614
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116948357 (BRF1)
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116948357 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
116948357
NCBI-ProteinID:
XP_032820849
UniProt:
A0AAJ7X456
LinkDB
All DBs
Position
33:complement(5555734..5572478)
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AA seq
726 aa
AA seq
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MAGGKVCQNCGCSDIETDSARGDAVCTACGSVLEDNIIVSEVQFQEGGGGASSVVGQFVS
SEGPGKAPSFGTGLYTGLGKESRALTLQNGRRHITQLGSQLQLNQHCLDTAFNFFKMAVS
KRLTRGRKMTHVVAACLYLVCRTESTPHMLLDFSDLLQVNVYVLGKTFLLLARSLCINAP
AIDPCLYIPRFAHMLEFGDKTHEVSMTAMRLVARMKRDWMHTGRRPSGLCGAALLVASRM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMRIDLEAECDPPSFISGKR
KAKVQQMDLEVSKQELDEYEEEISSFQQEIETELESRRPKLRGLYASLLKEVCSDSKDDL
MPDLEEDKEGDGQDEDDLMLMDANLPLGTDDIESEISSDREPSEPLGDSPCPPRSPALWR
SPGLEVDNSLRAVLGPLPTAASLGLKESIEECMAINEAEPLAEEEDGDLDLTDIDDLEIE
AYLLSKQEIDIKTELWMKENAAFLQEQQEKADREAKERELGIYKEKKPKKSGKRREPIRA
STAGEAIEKMLAQKRISSKINYEVLKDLNNKGGGSGASTPRRDDTAATTAVPASPRPESR
DRMRLTSINSLGKRIKPLLSSQSAKKFVLDKTASVCKEPPAVPALGGVPALALTEASGPT
SARGADPDHVAVVVESGPVRFQADEEAAAAEEEEEDEEDEPCVSALALMGQADYGCDDDE
EFDDAY
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggccggaggcaaggtttgccagaactgcggctgcagtgacatcgagacagactctgct
cgcggagatgctgtctgcacggcgtgtggctcggtgcttgaggacaacatcatcgtgtcc
gaggtacaattccaggagggcggtggcggagcgtcgtcagtcgtcgggcagttcgtctca
tcggaaggtccaggcaaagcaccctcatttggcacgggcctctacactggccttggaaaa
gagtctcgtgcacttacgctacagaatggtcggaggcacataacccagctgggtagccag
ctgcagctgaatcaacattgcctggacacggcattcaacttcttcaagatggcagtgagc
aagcggcttacgcgtggtcgcaagatgacccacgtggtggcagcttgcttgtatctggtg
tgccgcacagagagcacaccacatatgttgctggatttcagtgacctcttacaagtaaat
gtttatgtccttggaaaaacattccttcttttggcaagatccctgtgcatcaatgccccg
gcgatagacccttgcctgtacattccgcggtttgcccacatgctggagtttggagacaag
acgcacgaggtgtccatgacggccatgcgcctggtcgcgcgaatgaagcgcgactggatg
cacacgggacgccgcccctcgggcctctgcggagctgcattgctggtcgcatcacgcatg
catgactttagacggaccgtaaaggaagtaattcgagtggtgaaagtgtgcgagtcgacc
ttaaggaaaaggctcacggagtttgaggatacgcccacaagccagctgacgatcgatgag
ttcatgcgcattgacctggaggcggagtgcgacccaccctcgttcatcagcggcaaacgc
aaggccaaagtgcagcagatggacctggaagtatcaaagcaagaactcgatgaatatgaa
gaggagatcagctctttccagcaggagattgagaccgagcttgagtcacgaaggcccaag
ctgaggggactttatgccagcttgctcaaggaagtgtgcagcgacagcaaggacgacttg
atgcctgacctcgaggaggacaaagagggcgacggccaggacgaggacgatctcatgctg
atggacgccaacctgccgctgggcacggacgacatcgagtcggagataagcagcgaccgc
gagccctcggagccgctgggagattcgccgtgtccaccgcgcagccccgcgctgtggcgc
tcgcccggcctggaggtggacaacagcctgcgtgcggtgctggggcccttgcccaccgct
gccagcctgggcctcaaggagtccatcgaggagtgcatggccatcaatgaggcagagcca
cttgcggaggaggaagatggggacttggacctcaccgacattgatgacttggaaattgaa
gcttaccttttaagcaagcaagaaattgacatcaaaacagaactctggatgaaagagaat
gcagcatttctccaggaacaacaagaaaaagctgacagagaagccaaagaaagggaactt
ggcatatacaaggagaagaagcccaagaagtcgggcaagaggcgagagccgatccgggcc
agcacggcaggagaggccatcgagaagatgctggcccagaagaggatctccagcaagatc
aactacgaggtgctcaaggacctgaacaacaaggggggcggctcgggtgcttcgacgccg
cgtcgcgatgacactgcggccaccacggctgtaccggcatcgccgcgtcccgagtcccgg
gaccgcatgaggctgacctcgatcaactccctgggcaagaggataaagcctctattgtca
tctcagtcagccaagaaattcgtcctggataagactgccagcgtgtgcaaagaaccaccg
gccgtcccagcgctgggaggagttcctgccctggccctgacggaagcctcgggtccgact
tcggcaagaggcgcggatccagaccacgtggcggtggtggtggagagcgggcccgttcgg
ttccaggccgacgaggaggcggcggcagcggaagaggaagaggaggatgaggaggacgag
ccgtgcgtcagtgcgctcgcgctcatgggacaggctgactacggttgcgatgacgatgaa
gaatttgacgacgcctactga
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integrated database retrieval system
