Petromyzon marinus (sea lamprey): 116948449
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Entry
116948449 CDS
T09614
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116948449 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116948449 (VTI1B)
Membrane trafficking [BR:
pmrn04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
116948449 (VTI1B)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
DUF6057
HBB
UPF0556
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
116948449
NCBI-ProteinID:
XP_032821023
UniProt:
A0AAJ7TN35
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Position
33:complement(8390422..8395621)
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AA seq
226 aa
AA seq
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MSCENFETLQEEYLSIYQSLKAKLDSTLPRCHGEEKKRVTREIERSSEEAYLLLQEMEEE
LKGAPAPFRMQMVSRMRDYRRDLERITRETRRATDPALSARSDLLSGGLFAAQNKESAQV
ASDRARLLQGTESLGRASASVERSHRVAVETEQIGNEIIDELGTQREQLDRTRDRLTNTG
QNLSKSRKILTTMSRKLVTNKLLLGFIIILELGILGAAVYLKFFKK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgaaaacttcgagactcttcaagaggagtacctgagcatttaccagagtctc
aaggcgaagctggacagcacgctgccgcgatgccacggggaggagaagaagcgggtgacc
agggaaattgaaaggagttcggaagaagcttacctgctgctgcaagagatggaggaggag
ttgaagggggccccggcgccgttccgcatgcagatggtgtcgcgcatgcgtgactaccga
cgggacctggagcgcatcacgcgagagacccggcgtgccacggacccagctctctccgcc
cgctccgacctgctgagcggaggcttgtttgcagctcagaacaaggaaagcgcccaggtg
gcctcggaccgtgcaagactgctacagggcaccgaaagcttgggccgcgcttcggccagc
gttgagcgttcgcatcgcgttgctgttgagacggagcagattgggaatgagatcatcgac
gagttgggaacacagcgcgaacagctggacaggacgcgtgaccggcttacaaatacagga
caaaacctatcaaaaagcaggaaaatactgactacaatgtcacgcaagcttgtgaccaat
aaactcctacttggcttcatcatcatcctcgaacttggcattctgggtgctgctgtatac
ttgaaatttttcaagaaatga
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