Petromyzon marinus (sea lamprey): 116948452
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Entry
116948452 CDS
T09614
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116948452 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmrn01007
]
116948452 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116948452 (GARS1)
03029 Mitochondrial biogenesis [BR:
pmrn03029
]
116948452 (GARS1)
Enzymes [BR:
pmrn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
116948452 (GARS1)
Amino acid related enzymes [BR:
pmrn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
116948452 (GARS1)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116948452 (GARS1)
Mitochondrial biogenesis [BR:
pmrn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
116948452 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
YlaC
OS-D
Motif
Other DBs
NCBI-GeneID:
116948452
NCBI-ProteinID:
XP_032821030
UniProt:
A0AAJ7X4J7
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All DBs
Position
2:18752604..18775294
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AA seq
761 aa
AA seq
DB search
MLPLLLPRLSCCCCRLRLPLLPLLLLPPRPPSPSPLATRSHVRFRAGQAAGRRLTATLEV
KRRSSARGGGEGAAREMGDEEAREAVLAPLRAAVKEQGELVRNLKVDGAPKVDVDKAVTE
LKNRKRILEAKVLALEPKDDIIDRAKMEDTLKRRFFYDQAFAIYGGVSGLFDFGPVGCAL
KNNIIQQWRQHFIQEEQILEIDCTMLTPEPVLKASGHVDKFADFMVKDLKNGECFRADHL
LKAHLEKLMSDKKCSEEKKAEMKNVITQMDNYGQSQLAGLFTDYAVKSPVTGNDLSPPLA
FNLMFQTSIGPGGQTPGYLRPETAQGIFLNYKRLLEFNQGKLPFAAAQIGNSFRNEISPR
SGLIRVREFTMAEIEHFVDPTDKQHPKFENMADLELSLYSGQAQTSGRSPQRMRLGDAVQ
QGIINNTVLGYFIGRIYQFLVKVGVKDEHLRFRQHMDNEMAHYACDCWDAETKTSYGWIE
VVGCADRSCFDLQCHSRATKVPLVAEKPLKEPKVVEVVQLEANKGIVGKAFKKDARLVNK
FLEDCDSFYIESVEKQLAEKGAFNFEVEGKSFTLSKDMVTVKRFQKTLFVEEVVPNVIEP
SFGIGRIMYTILEHSFRVREGDEQRTYFSFPPTVAPYKCSVLPLSQNPEFAPFVKMLSEA
LTRNGVSHKVDDSSGSIGRRYARTDEIGISFGITVDFDTVNRQPHTATLRERDSMRQIRA
EVDELPGLVRDLSNGVLAWAEVEARHPLFEGQETGKKDVEE
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgctgctgctgccccggctgagttgctgctgctgccgcctccggctgccgctg
ttgccgctgctgctgctgccgcctcgacccccctcgccgtctcctctcgccactcgctcg
cacgtcagattccgagcggggcaggcggcagggcggaggctcacggcgacgctcgaggtc
aagcggcggtcgtcggcgaggggtggaggcgaaggagcggcgcgcgagatgggagacgag
gaggcgagggaagccgtgctggccccgctcagggcggcggtgaaggagcagggtgagctg
gtaagaaatttaaaggtggatggagcccccaaggtggacgtggataaagccgtgacagaa
ctgaagaatcgcaagaggatattggaggctaaggttctcgctttggagccaaaggacgac
atcatcgaccgggccaagatggaggacaccctcaagaggcggttcttctacgaccaggcc
ttcgccatctatggaggtgtgagtggcctctttgactttgggccggtgggctgcgccctc
aaaaacaacataatccagcagtggaggcagcacttcatccaggaggagcagatcctggag
attgactgtaccatgctgacacctgagcccgtcctcaaagcgtcagggcacgtggacaag
tttgctgacttcatggtgaaggacctcaaaaatggggagtgcttccgtgctgaccatcta
ctcaaagctcacctggagaagctcatgtccgataagaagtgctcggaggagaagaaggct
gagatgaagaacgtcatcacacagatggacaattacggacagtcgcagctggcaggtctg
ttcaccgactacgccgtgaagtcgcccgtcacaggaaacgacctctcgcctcccctggcc
ttcaacctcatgttccagacgtccattgggccgggcgggcagactcccgggtacctgcgg
cccgagacggcccagggcatcttcctcaactacaagcggctgctggagttcaaccagggc
aagctgccattcgctgccgcgcagatcgggaactccttccgcaatgagatctctccgcgc
tccgggctcatccgcgtcagggagttcacgatggcagagatcgagcactttgtggacccc
accgacaagcagcaccccaagtttgagaacatggctgacctggagctgtccctctactcg
ggccaagcgcagacgagcgggcgctcgccgcagcgcatgcgcctcggcgacgcggtgcag
cagggcatcataaacaacacggtgctcgggtacttcatcggccgcatctaccagttcctg
gtgaaggtcggcgtcaaggacgagcacctgcgcttccgccagcatatggacaatgagatg
gcgcactatgcctgcgactgctgggacgccgagacgaagacctcatacggatggatcgag
gtggtgggctgcgccgaccgctcgtgctttgacctccagtgccactcccgtgctaccaag
gtgccactggtggccgagaagcctctcaaagagcccaaggtggtggaggtggtgcagctg
gaagctaacaagggcatcgttggaaaggccttcaagaaagatgcacggctggtgaacaag
tttctggaagattgcgacagcttctatatcgaatcggtggagaagcagcttgcagagaag
ggagcgttcaactttgaggtggaagggaagagcttcactctgtccaaggacatggtgact
gtcaagcgttttcagaagacgctgttcgtggaggaggtggtgcccaacgtgattgagcca
tcgtttggaatcggccgcatcatgtacaccatcctcgagcacagcttccgcgtgcgggag
ggtgacgaacagaggacgtatttctccttcccgcccaccgtcgctccctacaagtgctcc
gtgctgcctctcagccagaacccggagtttgcgcccttcgtcaagatgctgtcggaggcg
ctgacgcggaacggagtgtcgcacaaggtggacgactcgtcagggtcgatcgggcgccgc
tacgcgcgcaccgacgagatcggaatctcgttcggcatcaccgtcgacttcgacaccgtc
aaccgacagccccacaccgccacgctgcgcgagcgcgactccatgcgccagattcgcgcc
gaagtggacgagctgccgggcctggtgcgggacctgtccaacggtgttctcgcgtgggcc
gaggtggaggcccgccacccgcttttcgagggccaggagacgggcaagaaggatgtggag
gagtga
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