Petromyzon marinus (sea lamprey): 116948535
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Entry
116948535 CDS
T09614
Name
(RefSeq) sonic hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116948535
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116948535
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmrn00536
]
116948535
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C46: hedgehog family
116948535
Glycosaminoglycan binding proteins [BR:
pmrn00536
]
Heparan sulfate / Heparin
Morphogens
116948535
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
EpmC
Motif
Other DBs
NCBI-GeneID:
116948535
NCBI-ProteinID:
XP_032821176
UniProt:
A0AAJ7TQK7
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Position
34:741418..889120
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AA seq
604 aa
AA seq
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MEDPVWRPLGPASGFEKGGEMEQMETSLHFASAAALPTAAATPSMALAFNLEEKNKSASD
WSQQQQQQRQQLPASGVQPRLRPGVLCLPVAEGGQGLVDVAARVTSFRLVAVRRLLYDRE
ELPWKSPALALLRNAGGCLGYGKELFQMDLSLVDYTRLPAMRPSRSARLLWLSLAVASVC
ASLLPRGGAACGPGRSFGRRRQARRLSPVALRQFVPHAAERTLGASGRAQGRVARGSERF
RAELSPNYNPDVEFKDEERTGADRLMTQRCKDRLNSLAISVMNQWPGVKLRVTEGWDEDG
HHSDESLHYEGRAVDITTSDRDRAKYGMLARLAVEAGFDWVHYESKGHVHCSVKADDSAA
ARAGGCFPGAARALLEDGRARRVGDLRPGDRVLAGDPASPARGPFFSDFVAFLDARPRER
ARLVAVETLRPRRSLLLTPAHLLFAAESPAGPFAARFAGGVRAGHYVYVTARRLLRAARV
ERVREAALPAALYAPATAHGTIVVEGVLASCYAATERHELAHWALAPMRAALALRGLLPS
PPGRGPDAAAPPANCSGGCGGGDDGGGDGGCGGLHWYPAALYTLGRWLLGDEALHPLGMV
EDPT
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccccgtctggaggccccttggacctgccagcgggtttgagaagggaggcgag
atggagcagatggagacgagtctacactttgcttccgcagctgcactacccacagctgcc
gccaccccgtcgatggccctcgcattcaatttggaagagaaaaataaatcagcgtcggac
tggtcgcagcagcagcagcagcagcggcagcagcttcccgcgagcggggtgcaaccccgg
ctcaggccgggcgttctctgcctgccggtggccgagggcggccagggtctggtggacgtc
gccgccagggtcacgagtttcaggctcgtggcagtcaggcggctgctgtacgaccgggag
gagcttccctggaagtcgccggccctcgccctgctgaggaatgcaggggggtgcctgggg
tacggaaaggagctcttccagatggacctgagcctggtcgactacacgaggctgccagcg
atgcgtccgtcccgctcggcgcgcctgctgtggctctcgctggcggtggcctccgtctgc
gcgtcgctcctcccgcgcggcggcgccgcgtgcggcccggggcgctcgttcggccgccgt
cggcaggcgcggcgcctctccccggtggcgctgcgccagttcgtgccgcacgcggccgag
aggacgctgggcgccagcgggcgcgcccaggggcgcgtagcacgcggctcggagcggttt
cgcgccgagctgagccccaactacaaccccgacgtcgagttcaaggacgaggagcgcacg
ggagccgaccgcctcatgacgcagcgctgcaaggaccgtctcaactcgctcgccatctcg
gtgatgaaccagtggcccggcgtgaagctgcgcgtgaccgagggctgggacgaggacggc
caccactcggacgagtcgctgcactacgaggggcgcgccgtggacatcaccacgtcggac
cgcgaccgagccaagtacggcatgctggcgcgcctggcggtcgaggcaggcttcgactgg
gtccactacgagtccaagggtcacgtgcactgctccgtcaaggccgacgactcagcggcc
gcgcgcgccggtggctgcttcccaggcgccgctcgcgccctcctggaggacggccgcgca
cgccgcgtgggcgacctgcgtccgggcgaccgcgtcctcgccggggaccccgcgtcgcca
gcgcgcggccccttcttcagcgacttcgtggccttcctggatgcgcggccgcgggagcgc
gcgcgcctcgtggccgtcgagacgctgcggccgcggcgctcgctgctgctcacgccggcg
cacctcctcttcgccgccgagtcgcccgcggggcccttcgcggcgcgcttcgccggcggc
gtgcgggcgggccactacgtctacgtgaccgcgaggcggctgctccgggcggcgcgcgtc
gagcgcgtgcgggaggcggcgctgcccgcggctctgtacgcgcccgccacggcgcacggc
accatcgtggtggagggggtcctggcctcgtgctacgctgccacggagcgccacgagctg
gcccactgggccctggcgccgatgcgcgccgcgctcgcgctgcgcggcctcctcccgtcg
ccgccggggcgcgggccggacgcggcggcgccgcccgcgaactgcagcggcggctgcggc
ggcggcgacgacggcggcggtgacggcggctgtggcggtctgcactggtacccggcggcg
ctctacacgctgggccggtggctgctcggggacgaggctctgcaccccctgggcatggtg
gaggatcccacatga
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