Petromyzon marinus (sea lamprey): 116948603
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Entry
116948603 CDS
T09614
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116948603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116948603
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116948603
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116948603
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116948603
PBAF complex
116948603
GBAF(ncBAF) complex
116948603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
116948603
NCBI-ProteinID:
XP_032821321
UniProt:
A0AAJ7TNJ6
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All DBs
Position
34:3628823..3661670
Genome browser
AA seq
553 aa
AA seq
DB search
MMAGRAPPGFPLGALLAQQQQQQQPGQQHQQQMQQPQLQALGYRAAVGPFPRPGIPSGGR
LQPSGPPMGPPAGPPYGGGPVMGGGPAMGGGGPGMGGPMGPMGGVGPLGMRPGMGPPPHQ
ASPHGPALTMADSSRKRPAPASQGSQLAQQSHHQQSRNRCAKKKKMADKVLPQRVRELVP
ESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPMKQKRKLRVFISNTYNPAKPDAEDEEG
SIASWELRVEGRLLDDMTSNKYDTSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTQ
TTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQY
VKTHKLQDSHEREYILCDKYLHQIFECPRMKFSEIPQRLHALLIPPDPIIINHIISVDSN
DQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDTKIHETIETINQLKIQREFML
GFARDPQGFINDWLQSQCHDLKTMTDVVGNPEEERHAEFYFQPWAQEAVCRYFYSKVQQR
RQELEQALGIRNT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgggcagagctccaccgggtttcccgctcggcgcactcctcgctcagcagcag
cagcaacagcagccgggacagcagcatcagcagcaaatgcagcagccgcagctgcaggcg
ctgggctaccgcgcggccgtgggccccttcccgcgacccggcatcccgtctggcggccgc
ctgcagccctcggggccccccatgggccccccggcggggcctccgtacggcgggggcccc
gtgatgggtggcgggccggcgatggggggcgggggacccggcatgggagggccgatggga
cccatgggcggcgtgggaccgctgggcatgcggcccggcatgggccccccaccgcaccag
gcgtccccgcacggcccggccctcaccatggcagactcatcgcgcaagcgcccagcgccg
gcttcccagggctcgcagctggcgcagcagtcgcaccaccagcagagccgcaaccgctgt
gccaagaagaagaagatggccgataaggtgctgcctcagagggtgcgtgagctggtgccc
gagtcacaggcctacatggacctgctggcatttgagcgcaagctggaccagacgatcatg
cgcaagcgcctggacatccaggaggcgctcaagcggcccatgaagcaaaagcgcaagcta
cgtgtgttcatctcgaacacctacaaccccgccaagccagacgccgaggacgaggagggc
agcattgcatcatgggagctgcgcgtggaggggcggctcctggatgacatgacgtcgaac
aagtacgacacgagcaagcagaagcgcaagttctcctctttcttcaagagcctggttatc
gagctcgacaaggatctctacgggcccgacaaccacctggtggagtggcaccgcacgcag
accactcaggagacggacgggttccaggtgaagcgcccaggtgacgtcaatgtgcgctgc
actgtactgctcatgctggactaccagccgccgcagttcaagctggacccgcgtctggcg
cgattgctggggatccacacgcagacgcgccccgtcatcatccaggcgctgtggcagtac
gtgaagactcacaagctgcaggactcgcacgagcgcgagtacatcctctgcgacaaatac
ctgcaccagatcttcgagtgcccgcgcatgaagttctcggagatcccgcagcgcctgcac
gcactgctcatccctcccgacccaatcatcatcaaccacatcatcagtgtcgactccaac
gaccagaagaagacggcctgctacgacatcgacgtggaggtggacgacaccctcaagacg
cagatgaactcgttcctgctgtccactgcgagccagcaggagatcgccacgctcgacacc
aagatccacgagaccatcgagacgatcaaccagctgaagatccagcgagagttcatgctg
ggattcgcacgtgacccccagggcttcatcaacgactggctccagtcacagtgtcatgac
ctgaagacgatgacggatgtggtggggaaccccgaggaagagcgccacgccgagttctac
ttccagccgtgggcacaggaggccgtgtgccgctacttctactccaaggtgcaacagcgg
aggcaggagctggagcaggcgctgggcatccgcaacacctag
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